RNA–Protein interactions for RNA: ENST00000361339.9

IFT140-201, Transcript of intraflagellar transport 140, humanhuman

TSL 1 (best) BASIC

Gene IFT140, Length 2,987 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-201ENST00000361339 ZNF80P51504 273 aaPredicted RBP12.47□□□□□ -0.41
IFT140-201ENST00000361339 TRAV26-2A0A0B4J265 109 aa12.47□□□□□ -0.41
IFT140-201ENST00000361339 LOC107984156A0A0G2JMH3 177 aa12.47□□□□□ -0.41
IFT140-201ENST00000361339 C15orf32Q32M92 178 aa12.47□□□□□ -0.41
IFT140-201ENST00000361339 ARL17AQ8IVW1 177 aa12.47□□□□□ -0.41
IFT140-201ENST00000361339 RNF182Q8N6D2 247 aa12.47□□□□□ -0.41
IFT140-201ENST00000361339 USP9XQ93008 2570 aaPredicted RBP12.46□□□□□ -0.41
IFT140-201ENST00000361339 MT-ATP8P03928 68 aa12.46□□□□□ -0.41
IFT140-201ENST00000361339 SPINK8P0C7L1 97 aa12.46□□□□□ -0.41
IFT140-201ENST00000361339 SCGB1A1P11684 91 aa12.46□□□□□ -0.41
IFT140-201ENST00000361339 LMO4P61968 165 aa12.46□□□□□ -0.42
IFT140-201ENST00000361339 ZNF493Q6ZR52 646 aa12.46□□□□□ -0.42
IFT140-201ENST00000361339 CENPEQ02224 2701 aa12.45□□□□□ -0.42
IFT140-201ENST00000361339 PRAC2D3DTV9 90 aa12.45□□□□□ -0.42
IFT140-201ENST00000361339 EFNA4P52798 201 aa12.45□□□□□ -0.42
IFT140-201ENST00000361339 ERCC8Q13216 396 aa12.45□□□□□ -0.42
IFT140-201ENST00000361339 ITLN2Q8WWU7 325 aaPredicted RBP12.45□□□□□ -0.42
IFT140-201ENST00000361339 DPM2O94777 84 aa12.45□□□□□ -0.42
IFT140-201ENST00000361339 CLEC3BP05452 202 aa12.45□□□□□ -0.42
IFT140-201ENST00000361339 PAX8Q06710 450 aa12.45□□□□□ -0.42
IFT140-201ENST00000361339 SPATA25Q9BR10 227 aa12.45□□□□□ -0.42
IFT140-201ENST00000361339 AAMDCQ9H7C9 122 aa12.45□□□□□ -0.42
IFT140-201ENST00000361339 ZFYVE26Q68DK2 2539 aa12.45□□□□□ -0.42
IFT140-201ENST00000361339 A0A1B0GW15 77 aa12.45□□□□□ -0.42
IFT140-201ENST00000361339 TNFRSF6BO95407 300 aa12.45□□□□□ -0.42
IFT140-201ENST00000361339 ANXA2RQ3ZCQ2 193 aa12.45□□□□□ -0.42
IFT140-201ENST00000361339 BRD3OSQ6XYD6 125 aa12.45□□□□□ -0.42
IFT140-201ENST00000361339 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.44□□□□□ -0.423e-7■■■□□ 16.3
IFT140-201ENST00000361339 PSMB2P49721 201 aa12.44□□□□□ -0.42
IFT140-201ENST00000361339 EBI3Q14213 229 aa12.44□□□□□ -0.42
IFT140-201ENST00000361339 CLEC19AQ6UXS0 136 aa12.44□□□□□ -0.42
IFT140-201ENST00000361339 MRAP2Q96G30 205 aa12.44□□□□□ -0.42
IFT140-201ENST00000361339 SS18L2Q9UHA2 77 aa12.44□□□□□ -0.42
IFT140-201ENST00000361339 U3KQK5 164 aa12.44□□□□□ -0.42
IFT140-201ENST00000361339 SPRY2O43597 315 aa12.43□□□□□ -0.42
IFT140-201ENST00000361339 Q6AWC8 147 aa12.43□□□□□ -0.42
IFT140-201ENST00000361339 POLQO75417 2590 aa12.43□□□□□ -0.42
IFT140-201ENST00000361339 ZANQ9Y493 2812 aa12.43□□□□□ -0.42
IFT140-201ENST00000361339 IGSF10Q6WRI0 2623 aa12.43□□□□□ -0.42
IFT140-201ENST00000361339 Q6ZQT7 251 aa12.43□□□□□ -0.42
IFT140-201ENST00000361339 UFC1Q9Y3C8 167 aa12.43□□□□□ -0.42
IFT140-201ENST00000361339 PGPEP1Q9NXJ5 209 aa12.42□□□□□ -0.42
IFT140-201ENST00000361339 CSPG4Q6UVK1 2322 aa12.42□□□□□ -0.42
IFT140-201ENST00000361339 H3BVH4 76 aa12.42□□□□□ -0.42
IFT140-201ENST00000361339 ZNF575Q86XF7 245 aa12.42□□□□□ -0.42
IFT140-201ENST00000361339 CCDC140Q96MF4 163 aa12.42□□□□□ -0.42
IFT140-201ENST00000361339 TM2D2Q9BX73 214 aa12.42□□□□□ -0.42
IFT140-201ENST00000361339 MRPL16Q9NX20 251 aaKnown RBP12.42□□□□□ -0.42
IFT140-201ENST00000361339 MINOS1Q5TGZ0 78 aa12.42□□□□□ -0.42
IFT140-201ENST00000361339 C1orf122Q6ZSJ8 110 aa12.42□□□□□ -0.42
IFT140-201ENST00000361339 MINOS1-NBL1R4GNA1 71 aa12.42□□□□□ -0.42
IFT140-201ENST00000361339 C8orf86Q6ZUL3 223 aa12.41□□□□□ -0.42
IFT140-201ENST00000361339 RNF183Q96D59 192 aa12.41□□□□□ -0.42
IFT140-201ENST00000361339 RNF185Q96GF1 192 aa12.41□□□□□ -0.42
IFT140-201ENST00000361339 HIGD1BQ9P298 99 aa12.41□□□□□ -0.42
IFT140-201ENST00000361339 IGHV4-39P01824 125 aa12.41□□□□□ -0.42
IFT140-201ENST00000361339 UBE2E1P51965 193 aa12.41□□□□□ -0.42
IFT140-201ENST00000361339 RRN3P1Q2M238 152 aa12.41□□□□□ -0.42
IFT140-201ENST00000361339 ZFP2Q6ZN57 461 aa12.41□□□□□ -0.42
IFT140-201ENST00000361339 CENPVL3A0A0U1RRI6 287 aa12.4□□□□□ -0.42
IFT140-201ENST00000361339 NFE4Q86UQ8 179 aa12.4□□□□□ -0.42
IFT140-201ENST00000361339 LYPD1Q8N2G4 141 aa12.4□□□□□ -0.42
IFT140-201ENST00000361339 ZNF502Q8TBZ5 544 aa12.4□□□□□ -0.42
IFT140-201ENST00000361339 PRR25Q96S07 402 aa12.4□□□□□ -0.42
IFT140-201ENST00000361339 CACNA1AO00555 2505 aa12.4□□□□□ -0.42
IFT140-201ENST00000361339 MYOZ3Q8TDC0 251 aa12.4□□□□□ -0.42
IFT140-201ENST00000361339 MYO18BQ8IUG5 2567 aa12.39□□□□□ -0.43
IFT140-201ENST00000361339 CLPSL1A2RUU4 121 aa12.39□□□□□ -0.43
IFT140-201ENST00000361339 TRGV3P03979 118 aa12.39□□□□□ -0.43
IFT140-201ENST00000361339 FHL3Q13643 280 aa12.39□□□□□ -0.43
IFT140-201ENST00000361339 ZFAND3Q9H8U3 227 aa12.39□□□□□ -0.43
IFT140-201ENST00000361339 J3KRW8 73 aa12.39□□□□□ -0.43
IFT140-201ENST00000361339 FOXI1Q12951 378 aa12.39□□□□□ -0.43
IFT140-201ENST00000361339 GATD1Q8NB37 220 aa12.39□□□□□ -0.43
IFT140-201ENST00000361339 TRBV6-1A0A0K0K1D8 114 aa12.39□□□□□ -0.43
IFT140-201ENST00000361339 LINC01549A6NIU2 74 aa12.39□□□□□ -0.43
IFT140-201ENST00000361339 NPFFO15130 113 aa12.39□□□□□ -0.43
IFT140-201ENST00000361339 HLA-DRB4P13762 266 aa12.39□□□□□ -0.43
IFT140-201ENST00000361339 RPL7P18124 248 aaKnown RBP12.39□□□□□ -0.43
IFT140-201ENST00000361339 XGP55808 180 aa12.39□□□□□ -0.43
IFT140-201ENST00000361339 PRO0461Q9UI25 63 aa12.39□□□□□ -0.43
IFT140-201ENST00000361339 HLA-DRB4X5D2U9 266 aa12.39□□□□□ -0.43
IFT140-201ENST00000361339 ZNF48Q96MX3 618 aaPredicted RBP12.38□□□□□ -0.43
IFT140-201ENST00000361339 USP9YO00507 2555 aaPredicted RBP12.38□□□□□ -0.43
IFT140-201ENST00000361339 HOXA3O43365 443 aaPredicted RBP12.38□□□□□ -0.43
IFT140-201ENST00000361339 DEFB1P60022 68 aa12.38□□□□□ -0.43
IFT140-201ENST00000361339 PDE6HQ13956 83 aa12.38□□□□□ -0.43
IFT140-201ENST00000361339 FAM110DQ8TAY7 271 aaPredicted RBP12.38□□□□□ -0.43
IFT140-201ENST00000361339 CDIP1Q9H305 208 aa12.37□□□□□ -0.43
IFT140-201ENST00000361339 IGHV4-61A0A0C4DH41 118 aa12.37□□□□□ -0.43
IFT140-201ENST00000361339 TRBV12-3P01733 135 aa12.37□□□□□ -0.43
IFT140-201ENST00000361339 SMCPP49901 116 aaPredicted RBP12.37□□□□□ -0.43
IFT140-201ENST00000361339 LY6EQ16553 131 aa12.37□□□□□ -0.43
IFT140-201ENST00000361339 ACACBO00763 2458 aa12.37□□□□□ -0.43
IFT140-201ENST00000361339 OOSP1A8MZH6 123 aa12.36□□□□□ -0.43
IFT140-201ENST00000361339 EMP1P54849 157 aa12.36□□□□□ -0.43
IFT140-201ENST00000361339 SRSF9Q13242 221 aaKnown RBP eCLIP12.36□□□□□ -0.43
IFT140-201ENST00000361339 SCGB1D4Q6XE38 83 aa12.36□□□□□ -0.43
IFT140-201ENST00000361339 IL17RELQ6ZVW7 336 aa12.36□□□□□ -0.43
IFT140-201ENST00000361339 KIR2DL4Q99706 377 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms