RNA–Protein interactions for RNA: ENST00000324444.7

SYNE4-201, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SYNE4, Length 1,354 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-201ENST00000324444 COLCA2A8K830 154 aa13.27□□□□□ -0.29
SYNE4-201ENST00000324444 HIGD1CA8MV81 97 aa13.27□□□□□ -0.29
SYNE4-201ENST00000324444 F2Z2F3 143 aa13.27□□□□□ -0.29
SYNE4-201ENST00000324444 K7EIL1 84 aa13.27□□□□□ -0.29
SYNE4-201ENST00000324444 INSP01308 110 aa13.27□□□□□ -0.29
SYNE4-201ENST00000324444 FAM3BP58499 235 aaPredicted RBP13.27□□□□□ -0.29
SYNE4-201ENST00000324444 GFI1BQ5VTD9 330 aa13.27□□□□□ -0.29
SYNE4-201ENST00000324444 FAM210BQ96KR6 192 aa13.27□□□□□ -0.29
SYNE4-201ENST00000324444 YPEL4Q96NS1 127 aa13.27□□□□□ -0.29
SYNE4-201ENST00000324444 A0A1B0GW15 77 aa13.26□□□□□ -0.29
SYNE4-201ENST00000324444 M0R2Z0 102 aa13.26□□□□□ -0.29
SYNE4-201ENST00000324444 CA1P00915 261 aaPredicted RBP13.26□□□□□ -0.29
SYNE4-201ENST00000324444 S100A8P05109 93 aa13.26□□□□□ -0.29
SYNE4-201ENST00000324444 ZNF124Q15973 351 aa13.26□□□□□ -0.29
SYNE4-201ENST00000324444 PRR9Q5T870 116 aa13.26□□□□□ -0.29
SYNE4-201ENST00000324444 TMEM256Q8N2U0 113 aa13.26□□□□□ -0.29
SYNE4-201ENST00000324444 TRAV12-3A0A0B4J271 114 aa13.25□□□□□ -0.29
SYNE4-201ENST00000324444 ZNF324O75467 553 aaPredicted RBP13.25□□□□□ -0.29
SYNE4-201ENST00000324444 TYMSP04818 313 aa13.25□□□□□ -0.29
SYNE4-201ENST00000324444 TDRG1Q3Y452 100 aa13.25□□□□□ -0.29
SYNE4-201ENST00000324444 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.25□□□□□ -0.29
SYNE4-201ENST00000324444 FER1L6-AS1Q8NA97 138 aa13.25□□□□□ -0.29
SYNE4-201ENST00000324444 MED14OSP0DP75 135 aa13.24□□□□□ -0.29
SYNE4-201ENST00000324444 RAB5AP20339 215 aa13.24□□□□□ -0.29
SYNE4-201ENST00000324444 TCL1AP56279 114 aa13.24□□□□□ -0.29
SYNE4-201ENST00000324444 DNLZQ5SXM8 178 aa13.24□□□□□ -0.29
SYNE4-201ENST00000324444 WDR73Q6P4I2 378 aa13.24□□□□□ -0.29
SYNE4-201ENST00000324444 NUP35Q8NFH5 326 aa13.24□□□□□ -0.29
SYNE4-201ENST00000324444 NAGKQ9UJ70 344 aa13.24□□□□□ -0.29
SYNE4-201ENST00000324444 IGHV1OR15-1A0A075B7D0 117 aa13.23□□□□□ -0.29
SYNE4-201ENST00000324444 TMSB15BA0A087X1C1 80 aa13.23□□□□□ -0.29
SYNE4-201ENST00000324444 TGIF2-C20orf24A0A0A6YYL0 155 aa13.23□□□□□ -0.29
SYNE4-201ENST00000324444 IGKV3D-20A0A0C4DH25 116 aa13.23□□□□□ -0.29
SYNE4-201ENST00000324444 RBMY1BA6NDE4 496 aaKnown RBP13.23□□□□□ -0.29
SYNE4-201ENST00000324444 RBMY1EA6NEQ0 496 aaKnown RBP13.23□□□□□ -0.29
SYNE4-201ENST00000324444 RBMY1DP0C7P1 496 aaKnown RBP13.23□□□□□ -0.29
SYNE4-201ENST00000324444 S100A4P26447 101 aaKnown RBP13.23□□□□□ -0.29
SYNE4-201ENST00000324444 ASIPP42127 132 aa13.23□□□□□ -0.29
SYNE4-201ENST00000324444 RIGQ13278 110 aa13.23□□□□□ -0.29
SYNE4-201ENST00000324444 DEFB121Q5J5C9 76 aa13.23□□□□□ -0.29
SYNE4-201ENST00000324444 LINC00467Q9BRT7 94 aa13.23□□□□□ -0.29
SYNE4-201ENST00000324444 SRD5A3Q9H8P0 318 aa13.23□□□□□ -0.29
SYNE4-201ENST00000324444 TRGV11A0A075B6L2 103 aa13.22□□□□□ -0.29
SYNE4-201ENST00000324444 TRAV12-2A0A075B6T6 113 aa13.22□□□□□ -0.29
SYNE4-201ENST00000324444 A0A1B0GUT8 65 aa13.22□□□□□ -0.29
SYNE4-201ENST00000324444 MT-ND6P03923 174 aa13.22□□□□□ -0.29
SYNE4-201ENST00000324444 ANXA2RQ3ZCQ2 193 aa13.22□□□□□ -0.29
SYNE4-201ENST00000324444 DEFB125Q8N687 156 aa13.22□□□□□ -0.29
SYNE4-201ENST00000324444 GTSF1Q8WW33 167 aa13.22□□□□□ -0.29
SYNE4-201ENST00000324444 PGLYRP4Q96LB8 373 aa13.22□□□□□ -0.29
SYNE4-201ENST00000324444 CRXO43186 299 aaPredicted RBP13.21□□□□□ -0.29
SYNE4-201ENST00000324444 OR5AL1P0C617 328 aa13.21□□□□□ -0.29
SYNE4-201ENST00000324444 IGLC6P0CF74 106 aa13.21□□□□□ -0.29
SYNE4-201ENST00000324444 CACNG7P62955 275 aa13.21□□□□□ -0.29
SYNE4-201ENST00000324444 C11orf21Q9P2W6 132 aa13.21□□□□□ -0.29
SYNE4-201ENST00000324444 GOLT1BQ9Y3E0 138 aa13.21□□□□□ -0.29
SYNE4-201ENST00000324444 LOC102724200A0A096LPH7 203 aaPredicted RBP13.2□□□□□ -0.3
SYNE4-201ENST00000324444 KIR2DL5BA0A0G2JN68 375 aa13.2□□□□□ -0.3
SYNE4-201ENST00000324444 KIR2DL5BA0A0G2JPC4 375 aa13.2□□□□□ -0.3
SYNE4-201ENST00000324444 CTRLP40313 264 aa13.2□□□□□ -0.3
SYNE4-201ENST00000324444 RPS10P46783 165 aaKnown RBP13.2□□□□□ -0.3
SYNE4-201ENST00000324444 APOC4P55056 127 aa13.2□□□□□ -0.3
SYNE4-201ENST00000324444 FXYD7P58549 80 aa13.2□□□□□ -0.3
SYNE4-201ENST00000324444 KIR3DS1Q14943 382 aa13.2□□□□□ -0.3
SYNE4-201ENST00000324444 KIR2DL5AQ8N109 375 aa13.2□□□□□ -0.3
SYNE4-201ENST00000324444 KIR2DL5BQ8NHK3 375 aa13.2□□□□□ -0.3
SYNE4-201ENST00000324444 GNB1LQ9BYB4 327 aa13.2□□□□□ -0.3
SYNE4-201ENST00000324444 CSTL1Q9H114 145 aa13.2□□□□□ -0.3
SYNE4-201ENST00000324444 GZMBP10144 247 aa13.2□□□□□ -0.3
SYNE4-201ENST00000324444 HBBP68871 147 aa13.2□□□□□ -0.3
SYNE4-201ENST00000324444 MUC21Q5SSG8 566 aa13.2□□□□□ -0.3
SYNE4-201ENST00000324444 Q8N1Y9 231 aa13.2□□□□□ -0.3
SYNE4-201ENST00000324444 TMEM208Q9BTX3 173 aa13.2□□□□□ -0.3
SYNE4-201ENST00000324444 TPPP3Q9BW30 176 aa13.2□□□□□ -0.3
SYNE4-201ENST00000324444 SSBP4Q9BWG4 385 aaPredicted RBP13.2□□□□□ -0.3
SYNE4-201ENST00000324444 GRIFINA4D1Z8 144 aa13.19□□□□□ -0.3
SYNE4-201ENST00000324444 SNAI2O43623 268 aa13.19□□□□□ -0.3
SYNE4-201ENST00000324444 RPL35AP18077 110 aaKnown RBP13.19□□□□□ -0.3
SYNE4-201ENST00000324444 LYZL1Q6UWQ5 148 aa13.19□□□□□ -0.3
SYNE4-201ENST00000324444 LINC01587Q99440 93 aa13.19□□□□□ -0.3
SYNE4-201ENST00000324444 CNFNQ9BYD5 112 aa13.19□□□□□ -0.3
SYNE4-201ENST00000324444 XCL2Q9UBD3 114 aa13.19□□□□□ -0.3
SYNE4-201ENST00000324444 AGRNO00468 2067 aa13.18□□□□□ -0.3
SYNE4-201ENST00000324444 CBY3A6NI87 242 aa13.18□□□□□ -0.3
SYNE4-201ENST00000324444 UBE2CO00762 179 aa13.18□□□□□ -0.3
SYNE4-201ENST00000324444 HLA-DQA1P01909 254 aa13.18□□□□□ -0.3
SYNE4-201ENST00000324444 MRPL54Q6P161 138 aaKnown RBP13.18□□□□□ -0.3
SYNE4-201ENST00000324444 WFDC10AQ9H1F0 79 aa13.18□□□□□ -0.3
SYNE4-201ENST00000324444 COL7A1Q02388 2944 aa13.17□□□□□ -0.3
SYNE4-201ENST00000324444 SPINK4O60575 86 aa13.17□□□□□ -0.3
SYNE4-201ENST00000324444 ARMS2P0C7Q2 107 aa13.17□□□□□ -0.3
SYNE4-201ENST00000324444 SMIM15Q7Z3B0 74 aa13.17□□□□□ -0.3
SYNE4-201ENST00000324444 PHLDA3Q9Y5J5 127 aa13.17□□□□□ -0.3
SYNE4-201ENST00000324444 IGHV4-4A0A075B6R2 117 aa13.16□□□□□ -0.3
SYNE4-201ENST00000324444 A0A1B0GXF2 115 aa13.16□□□□□ -0.3
SYNE4-201ENST00000324444 C1orf196B1AJZ1 125 aa13.16□□□□□ -0.3
SYNE4-201ENST00000324444 SPANXN1Q5VSR9 72 aa13.16□□□□□ -0.3
SYNE4-201ENST00000324444 TP53TG3Q9ULZ0 132 aa13.16□□□□□ -0.3
SYNE4-201ENST00000324444 TRAPPC1Q9Y5R8 145 aa13.16□□□□□ -0.3
SYNE4-201ENST00000324444 A8MZ25 164 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms