RNA–Protein interactions for RNA: ENST00000316485.11

PATJ-202, Transcript of PATJ, crumbs cell polarity complex component, humanhuman

TSL 5 BASIC

Gene PATJ, Length 3,657 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PATJ-202ENST00000316485 GFI1BQ5VTD9 330 aa3.34□□□□□ -1.87
PATJ-202ENST00000316485 TMEM136Q6ZRR5 245 aa3.34□□□□□ -1.87
PATJ-202ENST00000316485 APRG1Q8IVJ8 170 aa3.34□□□□□ -1.87
PATJ-202ENST00000316485 FER1L6-AS1Q8NA97 138 aa3.34□□□□□ -1.87
PATJ-202ENST00000316485 ATRQ13535 2644 aa3.34□□□□□ -1.87
PATJ-202ENST00000316485 NF1P21359 2839 aa3.34□□□□□ -1.87
PATJ-202ENST00000316485 TRAV12-3A0A0B4J271 114 aa3.34□□□□□ -1.87
PATJ-202ENST00000316485 A0A1B0GUT8 65 aa3.34□□□□□ -1.87
PATJ-202ENST00000316485 NPIPB6E9PJ23 425 aa3.34□□□□□ -1.87
PATJ-202ENST00000316485 HLA-DQA1P01909 254 aa3.34□□□□□ -1.87
PATJ-202ENST00000316485 CRISP2P16562 243 aa3.34□□□□□ -1.87
PATJ-202ENST00000316485 SRIP30626 198 aa3.34□□□□□ -1.87
PATJ-202ENST00000316485 KRTAP10-3P60369 221 aa3.34□□□□□ -1.87
PATJ-202ENST00000316485 TWIST1Q15672 202 aa3.34□□□□□ -1.87
PATJ-202ENST00000316485 SETXQ7Z333 2677 aaKnown RBP3.34□□□□□ -1.87
PATJ-202ENST00000316485 TEP1Q99973 2627 aaKnown RBP3.34□□□□□ -1.88
PATJ-202ENST00000316485 OTOGQ6ZRI0 2925 aa3.34□□□□□ -1.88
PATJ-202ENST00000316485 TRAV21A0A0B4J279 112 aa3.34□□□□□ -1.88
PATJ-202ENST00000316485 OR4C46A6NHA9 309 aa3.34□□□□□ -1.88
PATJ-202ENST00000316485 H3BVH4 76 aa3.34□□□□□ -1.88
PATJ-202ENST00000316485 SCGB1D1O95968 90 aa3.34□□□□□ -1.88
PATJ-202ENST00000316485 FOXA3P55318 350 aaPredicted RBP3.34□□□□□ -1.88
PATJ-202ENST00000316485 RPS20P60866 119 aaKnown RBP3.34□□□□□ -1.88
PATJ-202ENST00000316485 GNB1LQ9BYB4 327 aa3.34□□□□□ -1.88
PATJ-202ENST00000316485 C11orf21Q9P2W6 132 aa3.34□□□□□ -1.88
PATJ-202ENST00000316485 IGKV3D-20A0A0C4DH25 116 aa3.33□□□□□ -1.88
PATJ-202ENST00000316485 MT-ND6P03923 174 aa3.33□□□□□ -1.88
PATJ-202ENST00000316485 SLAQ13239 276 aa3.33□□□□□ -1.88
PATJ-202ENST00000316485 COX19Q49B96 90 aa3.33□□□□□ -1.88
PATJ-202ENST00000316485 ZFAND2AQ8N6M9 145 aa3.33□□□□□ -1.88
PATJ-202ENST00000316485 GFRA4Q9GZZ7 299 aa3.33□□□□□ -1.88
PATJ-202ENST00000316485 NIT2Q9NQR4 276 aa3.33□□□□□ -1.88
PATJ-202ENST00000316485 A0A0J9YX75 114 aa3.33□□□□□ -1.88
PATJ-202ENST00000316485 C5orf52A6NGY3 159 aa3.33□□□□□ -1.88
PATJ-202ENST00000316485 DUSP14O95147 198 aaKnown RBP3.33□□□□□ -1.88
PATJ-202ENST00000316485 FHL3Q13643 280 aa3.33□□□□□ -1.88
PATJ-202ENST00000316485 IQCJQ1A5X6 159 aa3.33□□□□□ -1.88
PATJ-202ENST00000316485 ANXA2RQ3ZCQ2 193 aa3.33□□□□□ -1.88
PATJ-202ENST00000316485 SPANXN1Q5VSR9 72 aa3.33□□□□□ -1.88
PATJ-202ENST00000316485 M0R381 172 aa3.33□□□□□ -1.88
PATJ-202ENST00000316485 GNRH2O43555 120 aa3.33□□□□□ -1.88
PATJ-202ENST00000316485 S100A12P80511 92 aa3.33□□□□□ -1.88
PATJ-202ENST00000316485 FAM159AQ6UWV7 190 aa3.33□□□□□ -1.88
PATJ-202ENST00000316485 ATP5L2Q7Z4Y8 100 aa3.33□□□□□ -1.88
PATJ-202ENST00000316485 NDUFA11Q86Y39 141 aa3.33□□□□□ -1.88
PATJ-202ENST00000316485 TMEM256Q8N2U0 113 aa3.33□□□□□ -1.88
PATJ-202ENST00000316485 MAP6D1Q9H9H5 199 aa3.33□□□□□ -1.88
PATJ-202ENST00000316485 MAST4O15021 2626 aa3.32□□□□□ -1.88
PATJ-202ENST00000316485 IGHV3OR16-12A0A075B7B8 117 aa3.32□□□□□ -1.88
PATJ-202ENST00000316485 FAM231BA6NCW3 169 aa3.32□□□□□ -1.88
PATJ-202ENST00000316485 ADARB2-AS1A8MUL3 147 aa3.32□□□□□ -1.88
PATJ-202ENST00000316485 F2Z2F3 143 aa3.32□□□□□ -1.88
PATJ-202ENST00000316485 S100A8P05109 93 aa3.32□□□□□ -1.88
PATJ-202ENST00000316485 CD7P09564 240 aa3.32□□□□□ -1.88
PATJ-202ENST00000316485 RAB4AP20338 218 aa3.32□□□□□ -1.88
PATJ-202ENST00000316485 TSPOP30536 169 aa3.32□□□□□ -1.88
PATJ-202ENST00000316485 LEPP41159 167 aa3.32□□□□□ -1.88
PATJ-202ENST00000316485 SMCPP49901 116 aaPredicted RBP3.32□□□□□ -1.88
PATJ-202ENST00000316485 LINC01559Q495D7 138 aa3.32□□□□□ -1.88
PATJ-202ENST00000316485 Q6AWC8 147 aa3.32□□□□□ -1.88
PATJ-202ENST00000316485 FOXI2Q6ZQN5 318 aa3.32□□□□□ -1.88
PATJ-202ENST00000316485 SPAG8Q99932 426 aaPredicted RBP3.32□□□□□ -1.88
PATJ-202ENST00000316485 MSRB1Q9NZV6 116 aa3.32□□□□□ -1.88
PATJ-202ENST00000316485 LENEPQ9Y5L5 61 aa3.32□□□□□ -1.88
PATJ-202ENST00000316485 NSD1Q96L73 2696 aaPredicted RBP3.32□□□□□ -1.88
PATJ-202ENST00000316485 VPS13DQ5THJ4 4388 aa3.32□□□□□ -1.88
PATJ-202ENST00000316485 A0A1B0GXF2 115 aa3.32□□□□□ -1.88
PATJ-202ENST00000316485 OR11H12B2RN74 326 aa3.32□□□□□ -1.88
PATJ-202ENST00000316485 HOXA5P20719 270 aa3.32□□□□□ -1.88
PATJ-202ENST00000316485 ASIPP42127 132 aa3.32□□□□□ -1.88
PATJ-202ENST00000316485 CDKN1BP46527 198 aa3.32□□□□□ -1.88
PATJ-202ENST00000316485 TCTAP57738 103 aa3.32□□□□□ -1.88
PATJ-202ENST00000316485 AMN1Q8IY45 258 aa3.32□□□□□ -1.88
PATJ-202ENST00000316485 OR10D4PQ8NGN7 298 aa3.32□□□□□ -1.88
PATJ-202ENST00000316485 OR10AG1Q8NH19 301 aa3.32□□□□□ -1.88
PATJ-202ENST00000316485 PHLDA3Q9Y5J5 127 aa3.32□□□□□ -1.88
PATJ-202ENST00000316485 C7orf71A4D174 169 aa3.32□□□□□ -1.88
PATJ-202ENST00000316485 UBE2CO00762 179 aa3.32□□□□□ -1.88
PATJ-202ENST00000316485 PMCHP20382 165 aa3.32□□□□□ -1.88
PATJ-202ENST00000316485 COX8CQ7Z4L0 72 aa3.32□□□□□ -1.88
PATJ-202ENST00000316485 STHQ8IWL8 128 aa3.32□□□□□ -1.88
PATJ-202ENST00000316485 WFDC10AQ9H1F0 79 aa3.32□□□□□ -1.88
PATJ-202ENST00000316485 SMKR1H3BMG3 65 aa3.31□□□□□ -1.88
PATJ-202ENST00000316485 SERF1AO75920 110 aa3.31□□□□□ -1.88
PATJ-202ENST00000316485 NCR2O95944 276 aa3.31□□□□□ -1.88
PATJ-202ENST00000316485 RPL35AP18077 110 aaKnown RBP3.31□□□□□ -1.88
PATJ-202ENST00000316485 RNASEKQ6P5S7 137 aaKnown RBP3.31□□□□□ -1.88
PATJ-202ENST00000316485 RASL11AQ6T310 242 aa3.31□□□□□ -1.88
PATJ-202ENST00000316485 SMIM15Q7Z3B0 74 aa3.31□□□□□ -1.88
PATJ-202ENST00000316485 TMEM208Q9BTX3 173 aa3.31□□□□□ -1.88
PATJ-202ENST00000316485 LOC389332A0A1B0GUA5 103 aa3.31□□□□□ -1.88
PATJ-202ENST00000316485 CBY3A6NI87 242 aa3.31□□□□□ -1.88
PATJ-202ENST00000316485 A6NJY4 79 aa3.31□□□□□ -1.88
PATJ-202ENST00000316485 H3BMM0 161 aa3.31□□□□□ -1.88
PATJ-202ENST00000316485 NUPR1O60356 82 aa3.31□□□□□ -1.88
PATJ-202ENST00000316485 IGLC6P0CF74 106 aa3.31□□□□□ -1.88
PATJ-202ENST00000316485 COTL1Q14019 142 aa3.31□□□□□ -1.88
PATJ-202ENST00000316485 ODF3L2Q3SX64 289 aa3.31□□□□□ -1.88
PATJ-202ENST00000316485 HIST3H2BBQ8N257 126 aa3.31□□□□□ -1.88
PATJ-202ENST00000316485 XCL2Q9UBD3 114 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 91.5 ms