RNA–Protein interactions for RNA: ENST00000301453.7

OTUB1-201, Transcript of OTU deubiquitinase, ubiquitin aldehyde binding 1, humanhuman

TSL 2

Gene OTUB1, Length 2,493 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1-201ENST00000301453 CHAC1Q9BUX1 264 aa12.42□□□□□ -0.42
OTUB1-201ENST00000301453 MRPL35Q9NZE8 188 aaKnown RBP12.42□□□□□ -0.42
OTUB1-201ENST00000301453 SMPXQ9UHP9 88 aa12.42□□□□□ -0.42
OTUB1-201ENST00000301453 J3KRW8 73 aa12.41□□□□□ -0.42
OTUB1-201ENST00000301453 DPM2O94777 84 aa12.41□□□□□ -0.42
OTUB1-201ENST00000301453 TRBV12-3P01733 135 aa12.41□□□□□ -0.42
OTUB1-201ENST00000301453 LAGE3Q14657 143 aa12.41□□□□□ -0.42
OTUB1-201ENST00000301453 ITLN2Q8WWU7 325 aaPredicted RBP12.41□□□□□ -0.42
OTUB1-201ENST00000301453 C16orf92Q96LL3 132 aa12.41□□□□□ -0.42
OTUB1-201ENST00000301453 HIF1ANQ9NWT6 349 aa12.41□□□□□ -0.42
OTUB1-201ENST00000301453 TMEM160Q9NX00 188 aa12.41□□□□□ -0.42
OTUB1-201ENST00000301453 TRBV25-1A0A075B6N4 114 aa12.4□□□□□ -0.42
OTUB1-201ENST00000301453 SPANXN1Q5VSR9 72 aa12.4□□□□□ -0.42
OTUB1-201ENST00000301453 UNQ9165/PRO28630Q6UXU0 137 aa12.4□□□□□ -0.42
OTUB1-201ENST00000301453 ATP5LO75964 103 aa12.4□□□□□ -0.42
OTUB1-201ENST00000301453 MAPKAPK5-AS1Q8N8E1 139 aa12.4□□□□□ -0.42
OTUB1-201ENST00000301453 ABCA2Q9BZC7 2435 aa12.4□□□□□ -0.42
OTUB1-201ENST00000301453 TRAV41A0A0B4J266 112 aa12.39□□□□□ -0.43
OTUB1-201ENST00000301453 RPL24P83731 157 aaKnown RBP12.39□□□□□ -0.43
OTUB1-201ENST00000301453 K7EMI3 77 aa12.39□□□□□ -0.43
OTUB1-201ENST00000301453 K7ERJ3 54 aa12.38□□□□□ -0.43
OTUB1-201ENST00000301453 ZFAND2AQ8N6M9 145 aa12.38□□□□□ -0.43
OTUB1-201ENST00000301453 MYOZ3Q8TDC0 251 aa12.38□□□□□ -0.43
OTUB1-201ENST00000301453 TM2D2Q9BX73 214 aa12.38□□□□□ -0.43
OTUB1-201ENST00000301453 UCNP55089 124 aa12.37□□□□□ -0.43
OTUB1-201ENST00000301453 CEND1Q8N111 149 aa12.37□□□□□ -0.43
OTUB1-201ENST00000301453 PHLDA1Q8WV24 401 aaPredicted RBP12.37□□□□□ -0.43
OTUB1-201ENST00000301453 ARL3P36405 182 aa12.37□□□□□ -0.43
OTUB1-201ENST00000301453 SRSF1Q07955 248 aaKnown RBP eCLIP12.37□□□□□ -0.438e-8■□□□□ 11.3
OTUB1-201ENST00000301453 BRD3OSQ6XYD6 125 aa12.37□□□□□ -0.43
OTUB1-201ENST00000301453 NHP2Q9NX24 153 aaKnown RBP12.37□□□□□ -0.43
OTUB1-201ENST00000301453 A0A087WX48 190 aa12.36□□□□□ -0.43
OTUB1-201ENST00000301453 HLA-DRB4P13762 266 aa12.36□□□□□ -0.43
OTUB1-201ENST00000301453 MOB4Q9Y3A3 225 aa12.36□□□□□ -0.43
OTUB1-201ENST00000301453 HLA-DRB4X5D2U9 266 aa12.36□□□□□ -0.43
OTUB1-201ENST00000301453 TEX48A0A1B0GUV7 120 aa12.36□□□□□ -0.43
OTUB1-201ENST00000301453 C19orf84I3L1E1 186 aa12.36□□□□□ -0.43
OTUB1-201ENST00000301453 SOCS3O14543 225 aa12.36□□□□□ -0.43
OTUB1-201ENST00000301453 C9orf139Q6ZV77 190 aa12.36□□□□□ -0.43
OTUB1-201ENST00000301453 RASL10AQ92737 203 aa12.35□□□□□ -0.43
OTUB1-201ENST00000301453 SMIM2Q9BVW6 85 aa12.35□□□□□ -0.43
OTUB1-201ENST00000301453 FAM223BA6NKX1 122 aa12.35□□□□□ -0.43
OTUB1-201ENST00000301453 M0R381 172 aa12.35□□□□□ -0.43
OTUB1-201ENST00000301453 SPTAN1Q13813 2472 aaKnown RBP12.35□□□□□ -0.43
OTUB1-201ENST00000301453 FAM223AQ8IWN6 122 aa12.35□□□□□ -0.43
OTUB1-201ENST00000301453 CRIP2P52943 208 aaPredicted RBP12.34□□□□□ -0.43
OTUB1-201ENST00000301453 RPL39LQ96EH5 51 aaKnown RBP12.34□□□□□ -0.43
OTUB1-201ENST00000301453 MRAP2Q96G30 205 aa12.34□□□□□ -0.43
OTUB1-201ENST00000301453 LENEPQ9Y5L5 61 aa12.34□□□□□ -0.43
OTUB1-201ENST00000301453 RNF223E7ERA6 249 aa12.34□□□□□ -0.43
OTUB1-201ENST00000301453 F6UB75 175 aa12.34□□□□□ -0.43
OTUB1-201ENST00000301453 LY6DQ14210 128 aa12.34□□□□□ -0.43
OTUB1-201ENST00000301453 KLK15Q9H2R5 256 aa12.34□□□□□ -0.43
OTUB1-201ENST00000301453 E9PLD3 99 aa12.33□□□□□ -0.44
OTUB1-201ENST00000301453 SAMD13Q5VXD3 122 aa12.33□□□□□ -0.44
OTUB1-201ENST00000301453 C14orf178Q8N769 122 aaPredicted RBP12.33□□□□□ -0.44
OTUB1-201ENST00000301453 LINC00477Q96M19 166 aa12.33□□□□□ -0.44
OTUB1-201ENST00000301453 ATP6V0BQ99437 205 aa12.33□□□□□ -0.44
OTUB1-201ENST00000301453 F8W1H4 67 aa12.33□□□□□ -0.44
OTUB1-201ENST00000301453 IGHV3-11P01762 117 aa12.33□□□□□ -0.44
OTUB1-201ENST00000301453 IGHV4-39P01824 125 aa12.33□□□□□ -0.44
OTUB1-201ENST00000301453 TAL2Q16559 108 aa12.33□□□□□ -0.44
OTUB1-201ENST00000301453 ANXA2RQ3ZCQ2 193 aa12.33□□□□□ -0.44
OTUB1-201ENST00000301453 NCOR2Q9Y618 2525 aa12.32□□□□□ -0.44
OTUB1-201ENST00000301453 AGRNO00468 2067 aa12.32□□□□□ -0.44
OTUB1-201ENST00000301453 SPTBN4Q9H254 2564 aa12.32□□□□□ -0.44
OTUB1-201ENST00000301453 IGLL5B9A064 214 aa12.32□□□□□ -0.44
OTUB1-201ENST00000301453 FOXI2Q6ZQN5 318 aa12.32□□□□□ -0.44
OTUB1-201ENST00000301453 CHD8Q9HCK8 2581 aa12.32□□□□□ -0.44
OTUB1-201ENST00000301453 IGHV1-69DA0A0B4J2H0 117 aa12.32□□□□□ -0.44
OTUB1-201ENST00000301453 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.32□□□□□ -0.44
OTUB1-201ENST00000301453 GNRH2O43555 120 aa12.32□□□□□ -0.44
OTUB1-201ENST00000301453 IGHV1-69P01742 117 aa12.32□□□□□ -0.44
OTUB1-201ENST00000301453 SUMO2P61956 95 aaKnown RBP12.32□□□□□ -0.44
OTUB1-201ENST00000301453 COL12A1Q99715 3063 aa12.32□□□□□ -0.44
OTUB1-201ENST00000301453 NDUFA4O00483 81 aa12.31□□□□□ -0.44
OTUB1-201ENST00000301453 LCNL1Q6ZST4 164 aa12.31□□□□□ -0.44
OTUB1-201ENST00000301453 FAM19A4Q96LR4 140 aa12.31□□□□□ -0.44
OTUB1-201ENST00000301453 TRAV21A0A0B4J279 112 aa12.31□□□□□ -0.44
OTUB1-201ENST00000301453 CIDEAO60543 219 aa12.31□□□□□ -0.44
OTUB1-201ENST00000301453 LY6EQ16553 131 aa12.31□□□□□ -0.44
OTUB1-201ENST00000301453 Q6ZS46 218 aa12.31□□□□□ -0.44
OTUB1-201ENST00000301453 OR10J6PQ8NGY7 276 aa12.31□□□□□ -0.44
OTUB1-201ENST00000301453 IGKV3-7A0A075B6H7 116 aa12.3□□□□□ -0.44
OTUB1-201ENST00000301453 RNASE4P34096 147 aaKnown RBP12.3□□□□□ -0.44
OTUB1-201ENST00000301453 TOMM6Q96B49 74 aa12.3□□□□□ -0.44
OTUB1-201ENST00000301453 ZNF479Q96JC4 524 aa12.3□□□□□ -0.44
OTUB1-201ENST00000301453 SIGMAR1Q99720 223 aa12.3□□□□□ -0.44
OTUB1-201ENST00000301453 TRAV12-1A0A0B4J245 112 aa12.3□□□□□ -0.44
OTUB1-201ENST00000301453 F8VRH5 84 aa12.3□□□□□ -0.44
OTUB1-201ENST00000301453 H7C1H1 209 aa12.3□□□□□ -0.44
OTUB1-201ENST00000301453 J3QR89 54 aa12.3□□□□□ -0.44
OTUB1-201ENST00000301453 OVOL1O14753 267 aa12.3□□□□□ -0.44
OTUB1-201ENST00000301453 IGHV4-38-2P0DP08 117 aa12.3□□□□□ -0.44
OTUB1-201ENST00000301453 RNASE3P12724 160 aaKnown RBP12.3□□□□□ -0.44
OTUB1-201ENST00000301453 S100A4P26447 101 aaKnown RBP12.3□□□□□ -0.44
OTUB1-201ENST00000301453 PLNP26678 52 aa12.3□□□□□ -0.44
OTUB1-201ENST00000301453 C12orf74Q32Q52 190 aa12.3□□□□□ -0.44
OTUB1-201ENST00000301453 SPOCK3Q9BQ16 436 aa12.3□□□□□ -0.44
OTUB1-201ENST00000301453 DPH3P1Q9H4G8 78 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms