RNA–Protein interactions for RNA: ENST00000299333.7

SCN3B-201, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-201ENST00000299333 WDR86Q86TI4 376 aa11.76□□□□□ -0.53
SCN3B-201ENST00000299333 ANGP03950 147 aaKnown RBP11.75□□□□□ -0.53
SCN3B-201ENST00000299333 ARTNQ5T4W7 220 aa11.75□□□□□ -0.53
SCN3B-201ENST00000299333 XCL1P47992 114 aa11.75□□□□□ -0.53
SCN3B-201ENST00000299333 A0A0G2JNJ9 132 aa11.75□□□□□ -0.53
SCN3B-201ENST00000299333 SPRY2O43597 315 aa11.75□□□□□ -0.53
SCN3B-201ENST00000299333 ZNF134P52741 427 aa11.75□□□□□ -0.53
SCN3B-201ENST00000299333 TMEM105Q8N8V8 129 aa11.75□□□□□ -0.53
SCN3B-201ENST00000299333 Q9UFV3 132 aa11.75□□□□□ -0.53
SCN3B-201ENST00000299333 PI4KAP42356 2102 aa11.75□□□□□ -0.53
SCN3B-201ENST00000299333 GNRH2O43555 120 aa11.75□□□□□ -0.53
SCN3B-201ENST00000299333 LMO1P25800 156 aa11.75□□□□□ -0.53
SCN3B-201ENST00000299333 DSCR9P59020 149 aa11.75□□□□□ -0.53
SCN3B-201ENST00000299333 C3orf22Q8N5N4 141 aa11.75□□□□□ -0.53
SCN3B-201ENST00000299333 SPTBN1Q01082 2364 aaKnown RBP11.75□□□□□ -0.53
SCN3B-201ENST00000299333 TTTY13Q9BZ97 58 aa11.74□□□□□ -0.53
SCN3B-201ENST00000299333 C17orf58Q2M2W7 97 aa11.74□□□□□ -0.53
SCN3B-201ENST00000299333 LINC01545Q5VT33 79 aa11.74□□□□□ -0.53
SCN3B-201ENST00000299333 INTS1Q8N201 2190 aaKnown RBP11.74□□□□□ -0.53
SCN3B-201ENST00000299333 PROP1O75360 226 aa11.74□□□□□ -0.53
SCN3B-201ENST00000299333 POLEQ07864 2286 aa11.74□□□□□ -0.53
SCN3B-201ENST00000299333 BPESC1Q9GZL8 116 aa11.74□□□□□ -0.53
SCN3B-201ENST00000299333 MED12Q93074 2177 aa11.74□□□□□ -0.53
SCN3B-201ENST00000299333 PRR20EP86478 221 aa11.73□□□□□ -0.53
SCN3B-201ENST00000299333 PRR20CP86479 221 aa11.73□□□□□ -0.53
SCN3B-201ENST00000299333 PRR20DP86480 221 aa11.73□□□□□ -0.53
SCN3B-201ENST00000299333 PRR20BP86481 221 aa11.73□□□□□ -0.53
SCN3B-201ENST00000299333 PRR20AP86496 221 aa11.73□□□□□ -0.53
SCN3B-201ENST00000299333 SLC25A29Q8N8R3 303 aa11.73□□□□□ -0.53
SCN3B-201ENST00000299333 TRAV23DV6A0A075B6W5 121 aa11.73□□□□□ -0.53
SCN3B-201ENST00000299333 LOXL1Q08397 574 aaPredicted RBP11.73□□□□□ -0.53
SCN3B-201ENST00000299333 FOXE3Q13461 319 aa11.73□□□□□ -0.53
SCN3B-201ENST00000299333 TRAV4A0A0B4J268 109 aa11.73□□□□□ -0.53
SCN3B-201ENST00000299333 SEC61GP60059 68 aa11.73□□□□□ -0.53
SCN3B-201ENST00000299333 ATP6V0E2Q8NHE4 81 aa11.73□□□□□ -0.53
SCN3B-201ENST00000299333 COX7B2Q8TF08 81 aa11.73□□□□□ -0.53
SCN3B-201ENST00000299333 SIP14410 1827 aa11.73□□□□□ -0.53
SCN3B-201ENST00000299333 LY6DQ14210 128 aa11.72□□□□□ -0.53
SCN3B-201ENST00000299333 CRIPAKQ8N1N5 446 aa11.72□□□□□ -0.53
SCN3B-201ENST00000299333 HRCT1Q6UXD1 115 aa11.72□□□□□ -0.53
SCN3B-201ENST00000299333 FUSP35637 526 aaKnown RBP eCLIP11.72□□□□□ -0.53
SCN3B-201ENST00000299333 RHOHQ15669 191 aa11.72□□□□□ -0.53
SCN3B-201ENST00000299333 LINC01619G3V211 115 aa11.72□□□□□ -0.53
SCN3B-201ENST00000299333 FER1L5A0AVI2 2057 aa11.71□□□□□ -0.53
SCN3B-201ENST00000299333 NDUFA4O00483 81 aa11.71□□□□□ -0.53
SCN3B-201ENST00000299333 RPL39LQ96EH5 51 aaKnown RBP11.71□□□□□ -0.53
SCN3B-201ENST00000299333 MYO7BQ6PIF6 2116 aa11.71□□□□□ -0.53
SCN3B-201ENST00000299333 CADP27708 2225 aa11.71□□□□□ -0.53
SCN3B-201ENST00000299333 RBAKDNA6NC62 111 aa11.71□□□□□ -0.54
SCN3B-201ENST00000299333 IGF2BP2-AS1Q96M15 143 aa11.71□□□□□ -0.54
SCN3B-201ENST00000299333 WISP1O95388 367 aa11.71□□□□□ -0.54
SCN3B-201ENST00000299333 IL15RAQ13261 267 aa11.71□□□□□ -0.54
SCN3B-201ENST00000299333 MDS2Q8NDY4 140 aa11.71□□□□□ -0.54
SCN3B-201ENST00000299333 MRPL53Q96EL3 112 aaKnown RBP11.71□□□□□ -0.54
SCN3B-201ENST00000299333 E9PQ18 207 aa11.7□□□□□ -0.54
SCN3B-201ENST00000299333 XIRP1Q702N8 1843 aaKnown RBP11.7□□□□□ -0.54
SCN3B-201ENST00000299333 DIAPH2-AS1Q14236 149 aa11.7□□□□□ -0.54
SCN3B-201ENST00000299333 PRR30Q53SZ7 412 aaPredicted RBP11.7□□□□□ -0.54
SCN3B-201ENST00000299333 DAND5Q8N907 189 aa11.7□□□□□ -0.54
SCN3B-201ENST00000299333 SND1-IT1Q9HBX3 110 aa11.7□□□□□ -0.54
SCN3B-201ENST00000299333 BRWD3Q6RI45 1802 aa11.7□□□□□ -0.54
SCN3B-201ENST00000299333 E7EQL1 145 aa11.69□□□□□ -0.54
SCN3B-201ENST00000299333 UBE2E1P51965 193 aa11.69□□□□□ -0.54
SCN3B-201ENST00000299333 C5orf38Q86SI9 138 aa11.69□□□□□ -0.54
SCN3B-201ENST00000299333 NREPQ16612 68 aa11.69□□□□□ -0.54
SCN3B-201ENST00000299333 MBD3L4A6NDZ8 208 aaPredicted RBP11.69□□□□□ -0.54
SCN3B-201ENST00000299333 MBD3L3A6NE82 208 aaPredicted RBP11.69□□□□□ -0.54
SCN3B-201ENST00000299333 MBD3L5A6NJ08 208 aaPredicted RBP11.69□□□□□ -0.54
SCN3B-201ENST00000299333 H0YGX0 51 aa11.69□□□□□ -0.54
SCN3B-201ENST00000299333 TIMM17BO60830 172 aa11.69□□□□□ -0.54
SCN3B-201ENST00000299333 CGB3P0DN86 165 aa11.69□□□□□ -0.54
SCN3B-201ENST00000299333 ZNF491Q8N8L2 437 aa11.69□□□□□ -0.54
SCN3B-201ENST00000299333 MBD3L2Q8NHZ7 208 aaPredicted RBP11.69□□□□□ -0.54
SCN3B-201ENST00000299333 CLEC2BQ92478 149 aa11.69□□□□□ -0.54
SCN3B-201ENST00000299333 RBX1P62877 108 aa11.69□□□□□ -0.54
SCN3B-201ENST00000299333 SCN5AQ14524 2016 aa11.68□□□□□ -0.54
SCN3B-201ENST00000299333 AGPAT4-IT1Q9H0P7 198 aa11.68□□□□□ -0.54
SCN3B-201ENST00000299333 SMIM9A6NGZ8 99 aa11.68□□□□□ -0.54
SCN3B-201ENST00000299333 C15orf65H3BRN8 121 aa11.68□□□□□ -0.54
SCN3B-201ENST00000299333 Q6ZR03 302 aa11.68□□□□□ -0.54
SCN3B-201ENST00000299333 LINC00643Q86TS7 51 aa11.68□□□□□ -0.54
SCN3B-201ENST00000299333 VSIG2Q96IQ7 327 aa11.68□□□□□ -0.54
SCN3B-201ENST00000299333 TRIOBPQ9H2D6 2365 aa11.68□□□□□ -0.54
SCN3B-201ENST00000299333 A0A0J9YXV3 536 aa11.68□□□□□ -0.54
SCN3B-201ENST00000299333 UBE2BP63146 152 aa11.68□□□□□ -0.54
SCN3B-201ENST00000299333 TRBV10-2A0A0K0K1G8 114 aa11.67□□□□□ -0.54
SCN3B-201ENST00000299333 NDUFA7O95182 113 aa11.67□□□□□ -0.54
SCN3B-201ENST00000299333 CENPVL3A0A0U1RRI6 287 aa11.67□□□□□ -0.54
SCN3B-201ENST00000299333 PHF3Q92576 2039 aaKnown RBP11.67□□□□□ -0.54
SCN3B-201ENST00000299333 LGALS9O00182 355 aa11.67□□□□□ -0.54
SCN3B-201ENST00000299333 CGB7P0DN87 165 aa11.67□□□□□ -0.54
SCN3B-201ENST00000299333 LTBP1Q14766 1721 aa11.67□□□□□ -0.54
SCN3B-201ENST00000299333 IGHV1-69DA0A0B4J2H0 117 aa11.66□□□□□ -0.54
SCN3B-201ENST00000299333 A6NED7 52 aa11.66□□□□□ -0.54
SCN3B-201ENST00000299333 ELANEP08246 267 aa11.66□□□□□ -0.54
SCN3B-201ENST00000299333 MSRB1Q9NZV6 116 aa11.66□□□□□ -0.54
SCN3B-201ENST00000299333 IGLC6P0CF74 106 aa11.66□□□□□ -0.54
SCN3B-201ENST00000299333 Q6ZQT7 251 aa11.66□□□□□ -0.54
SCN3B-201ENST00000299333 EP300Q09472 2414 aaPredicted RBP11.66□□□□□ -0.54
SCN3B-201ENST00000299333 TMEM61Q8N0U2 210 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms