RNA–Protein interactions for RNA: ENST00000263388.6

NOTCH3-201, Transcript of notch 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH3, Length 8,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-201ENST00000263388 Q6ZWC4 215 aa13.96□□□□□ -0.17
NOTCH3-201ENST00000263388 IGHV2-70DA0A0C4DH43 119 aa13.96□□□□□ -0.18
NOTCH3-201ENST00000263388 PRSS57Q6UWY2 283 aa13.96□□□□□ -0.18
NOTCH3-201ENST00000263388 PYGO2Q9BRQ0 406 aa13.96□□□□□ -0.18
NOTCH3-201ENST00000263388 A0A1B0GUS0 222 aa13.95□□□□□ -0.18
NOTCH3-201ENST00000263388 H3BRN7 92 aa13.95□□□□□ -0.18
NOTCH3-201ENST00000263388 IGLC2P0DOY2 106 aa13.95□□□□□ -0.18
NOTCH3-201ENST00000263388 IGLC3P0DOY3 106 aa13.95□□□□□ -0.18
NOTCH3-201ENST00000263388 C20orf78Q9BR46 151 aa13.95□□□□□ -0.18
NOTCH3-201ENST00000263388 XCL2Q9UBD3 114 aa13.95□□□□□ -0.18
NOTCH3-201ENST00000263388 LY6HO94772 140 aa13.95□□□□□ -0.18
NOTCH3-201ENST00000263388 LINC00311Q8N616 119 aa13.95□□□□□ -0.18
NOTCH3-201ENST00000263388 CFHR4Q92496 578 aa13.95□□□□□ -0.18
NOTCH3-201ENST00000263388 ORMDL1Q9P0S3 153 aa13.95□□□□□ -0.18
NOTCH3-201ENST00000263388 HIVEP2P31629 2446 aa13.95□□□□□ -0.18
NOTCH3-201ENST00000263388 TTC28Q96AY4 2481 aa13.95□□□□□ -0.18
NOTCH3-201ENST00000263388 IGHV1-69DA0A0B4J2H0 117 aa13.95□□□□□ -0.18
NOTCH3-201ENST00000263388 C9JQL5 133 aa13.95□□□□□ -0.18
NOTCH3-201ENST00000263388 IGHV1-69P01742 117 aa13.95□□□□□ -0.18
NOTCH3-201ENST00000263388 ETDBQ3ZM63 59 aa13.95□□□□□ -0.18
NOTCH3-201ENST00000263388 C22orf46C9J442 243 aa13.95□□□□□ -0.18
NOTCH3-201ENST00000263388 CLPSL1A2RUU4 121 aa13.95□□□□□ -0.18
NOTCH3-201ENST00000263388 FHL1Q13642 323 aa13.94□□□□□ -0.18
NOTCH3-201ENST00000263388 C3orf56Q8N813 242 aa13.94□□□□□ -0.18
NOTCH3-201ENST00000263388 LTBP2Q14767 1821 aa13.94□□□□□ -0.18
NOTCH3-201ENST00000263388 NDUFA12Q9UI09 145 aa13.94□□□□□ -0.18
NOTCH3-201ENST00000263388 LRP4O75096 1905 aa13.94□□□□□ -0.18
NOTCH3-201ENST00000263388 LHBP01229 141 aa13.94□□□□□ -0.18
NOTCH3-201ENST00000263388 CRYBA4P53673 196 aa13.94□□□□□ -0.18
NOTCH3-201ENST00000263388 C17orf58Q2M2W7 97 aa13.94□□□□□ -0.18
NOTCH3-201ENST00000263388 ADAMTS20P59510 1910 aa13.94□□□□□ -0.18
NOTCH3-201ENST00000263388 SMIM2Q9BVW6 85 aa13.93□□□□□ -0.18
NOTCH3-201ENST00000263388 CGB3P0DN86 165 aa13.93□□□□□ -0.18
NOTCH3-201ENST00000263388 ZC2HC1AQ96GY0 325 aa13.93□□□□□ -0.18
NOTCH3-201ENST00000263388 KLK9Q9UKQ9 250 aa13.93□□□□□ -0.18
NOTCH3-201ENST00000263388 F6UB75 175 aa13.93□□□□□ -0.18
NOTCH3-201ENST00000263388 TEX36Q5VZQ5 186 aa13.93□□□□□ -0.18
NOTCH3-201ENST00000263388 ZNRD1Q9P1U0 126 aa13.93□□□□□ -0.18
NOTCH3-201ENST00000263388 IGHV3-16A0A0C4DH30 117 aa13.93□□□□□ -0.18
NOTCH3-201ENST00000263388 FXYD5Q96DB9 178 aa13.92□□□□□ -0.18
NOTCH3-201ENST00000263388 J3QLI3 93 aa13.92□□□□□ -0.18
NOTCH3-201ENST00000263388 ZFHX2Q9C0A1 2572 aaPredicted RBP13.92□□□□□ -0.18
NOTCH3-201ENST00000263388 TRAV26-2A0A0B4J265 109 aa13.92□□□□□ -0.18
NOTCH3-201ENST00000263388 H3BMG7 143 aa13.92□□□□□ -0.18
NOTCH3-201ENST00000263388 SPATA25Q9BR10 227 aa13.91□□□□□ -0.18
NOTCH3-201ENST00000263388 IGHV2-5P01817 119 aa13.91□□□□□ -0.18
NOTCH3-201ENST00000263388 CFHR3Q02985 330 aa13.91□□□□□ -0.18
NOTCH3-201ENST00000263388 MRPL35Q9NZE8 188 aaKnown RBP13.91□□□□□ -0.18
NOTCH3-201ENST00000263388 MP68P56378 58 aa13.91□□□□□ -0.18
NOTCH3-201ENST00000263388 RUSC1-AS1Q66K80 236 aa13.91□□□□□ -0.18
NOTCH3-201ENST00000263388 VWC2Q2TAL6 325 aa13.91□□□□□ -0.18
NOTCH3-201ENST00000263388 ETV2O00321 342 aaPredicted RBP13.91□□□□□ -0.18
NOTCH3-201ENST00000263388 CGB7P0DN87 165 aa13.91□□□□□ -0.18
NOTCH3-201ENST00000263388 RHOHQ15669 191 aa13.91□□□□□ -0.18
NOTCH3-201ENST00000263388 UNQ6494/PRO21346Q6UXR6 183 aa13.9□□□□□ -0.18
NOTCH3-201ENST00000263388 PRSS29PA6NIE9 313 aa13.9□□□□□ -0.18
NOTCH3-201ENST00000263388 ATOX1O00244 68 aa13.9□□□□□ -0.18
NOTCH3-201ENST00000263388 IGLL1P15814 213 aa13.9□□□□□ -0.18
NOTCH3-201ENST00000263388 VOPP1Q96AW1 172 aa13.9□□□□□ -0.18
NOTCH3-201ENST00000263388 J3KT08 172 aa13.89□□□□□ -0.19
NOTCH3-201ENST00000263388 J3QQQ9 107 aa13.89□□□□□ -0.19
NOTCH3-201ENST00000263388 CCDC168Q8NDH2 2452 aa13.89□□□□□ -0.19
NOTCH3-201ENST00000263388 ZNF493Q6ZR52 646 aa13.89□□□□□ -0.19
NOTCH3-201ENST00000263388 MYO9AB2RTY4 2548 aa13.89□□□□□ -0.19
NOTCH3-201ENST00000263388 RBAKDNA6NC62 111 aa13.89□□□□□ -0.19
NOTCH3-201ENST00000263388 K7EM74 188 aa13.89□□□□□ -0.19
NOTCH3-201ENST00000263388 ZNRF2Q8NHG8 242 aa13.89□□□□□ -0.19
NOTCH3-201ENST00000263388 TINCRA0A1B0GVN0 87 aa13.88□□□□□ -0.19
NOTCH3-201ENST00000263388 KNCNA6PVL3 124 aa13.88□□□□□ -0.19
NOTCH3-201ENST00000263388 C11orf52Q96A22 123 aa13.88□□□□□ -0.19
NOTCH3-201ENST00000263388 C15orf53Q8NAA6 179 aa13.88□□□□□ -0.19
NOTCH3-201ENST00000263388 WFDC9Q8NEX5 89 aa13.88□□□□□ -0.19
NOTCH3-201ENST00000263388 WT1-ASQ06250 92 aa13.88□□□□□ -0.19
NOTCH3-201ENST00000263388 MRPL53Q96EL3 112 aaKnown RBP13.88□□□□□ -0.19
NOTCH3-201ENST00000263388 TRAV12-2A0A075B6T6 113 aa13.88□□□□□ -0.19
NOTCH3-201ENST00000263388 E9PQ18 207 aa13.88□□□□□ -0.19
NOTCH3-201ENST00000263388 C15orf65H3BRN8 121 aa13.88□□□□□ -0.19
NOTCH3-201ENST00000263388 LTAP01374 205 aa13.88□□□□□ -0.19
NOTCH3-201ENST00000263388 ZNF726P1Q15940 193 aa13.88□□□□□ -0.19
NOTCH3-201ENST00000263388 ANXA2RQ3ZCQ2 193 aa13.88□□□□□ -0.19
NOTCH3-201ENST00000263388 IGFL3Q6UXB1 125 aa13.88□□□□□ -0.19
NOTCH3-201ENST00000263388 SMIM20Q8N5G0 67 aa13.87□□□□□ -0.19
NOTCH3-201ENST00000263388 G3V318 75 aa13.87□□□□□ -0.19
NOTCH3-201ENST00000263388 K7ENP7 123 aa13.87□□□□□ -0.19
NOTCH3-201ENST00000263388 WIPF2Q8TF74 440 aaPredicted RBP13.87□□□□□ -0.19
NOTCH3-201ENST00000263388 RNF223E7ERA6 249 aa13.87□□□□□ -0.19
NOTCH3-201ENST00000263388 NPSP0C0P6 89 aa13.86□□□□□ -0.19
NOTCH3-201ENST00000263388 PRSS47A8MTI9 375 aa13.86□□□□□ -0.19
NOTCH3-201ENST00000263388 LENEPQ9Y5L5 61 aa13.86□□□□□ -0.19
NOTCH3-201ENST00000263388 C2CD3Q4AC94 2353 aa13.86□□□□□ -0.19
NOTCH3-201ENST00000263388 IGHV7-4-1A0A0J9YVY3 117 aa13.86□□□□□ -0.19
NOTCH3-201ENST00000263388 K7ERJ3 54 aa13.86□□□□□ -0.19
NOTCH3-201ENST00000263388 ANGP03950 147 aaKnown RBP13.86□□□□□ -0.19
NOTCH3-201ENST00000263388 H3BUA1 57 aa13.85□□□□□ -0.19
NOTCH3-201ENST00000263388 NDUFS7O75251 213 aa13.85□□□□□ -0.19
NOTCH3-201ENST00000263388 SEC61GP60059 68 aa13.85□□□□□ -0.19
NOTCH3-201ENST00000263388 HERV-K104P63124 156 aa13.85□□□□□ -0.19
NOTCH3-201ENST00000263388 BAALC-AS2P0C853 105 aa13.85□□□□□ -0.19
NOTCH3-201ENST00000263388 WDR86Q86TI4 376 aa13.85□□□□□ -0.19
NOTCH3-201ENST00000263388 C1orf147Q96MC9 270 aaPredicted RBP13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 137.2 ms