RNA–Protein interactions for RNA: ENST00000256474.2

VHL-201, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VHL, Length 3,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-201ENST00000256474 PAX8Q06710 450 aa10.37□□□□□ -0.75
VHL-201ENST00000256474 FAM110DQ8TAY7 271 aaPredicted RBP10.37□□□□□ -0.75
VHL-201ENST00000256474 NBL1P41271 181 aa10.37□□□□□ -0.75
VHL-201ENST00000256474 PAX2Q02962 417 aa10.37□□□□□ -0.75
VHL-201ENST00000256474 TRBV6-1A0A0K0K1D8 114 aa10.37□□□□□ -0.75
VHL-201ENST00000256474 FAM74A4Q5TZK3 123 aa10.37□□□□□ -0.75
VHL-201ENST00000256474 BOD1L2Q8IYS8 172 aa10.37□□□□□ -0.75
VHL-201ENST00000256474 RPL39LQ96EH5 51 aaKnown RBP10.37□□□□□ -0.75
VHL-201ENST00000256474 HIST1H4GQ99525 98 aa10.37□□□□□ -0.75
VHL-201ENST00000256474 CHAC1Q9BUX1 264 aa10.37□□□□□ -0.75
VHL-201ENST00000256474 FABP2P12104 132 aa10.36□□□□□ -0.75
VHL-201ENST00000256474 PRR9Q5T870 116 aa10.36□□□□□ -0.75
VHL-201ENST00000256474 ZFAND3Q9H8U3 227 aa10.36□□□□□ -0.75
VHL-201ENST00000256474 NXT2Q9NPJ8 142 aaKnown RBP10.36□□□□□ -0.75
VHL-201ENST00000256474 TRAV41A0A0B4J266 112 aa10.36□□□□□ -0.75
VHL-201ENST00000256474 DPM2O94777 84 aa10.36□□□□□ -0.75
VHL-201ENST00000256474 SMIM13P0DJ93 91 aa10.36□□□□□ -0.75
VHL-201ENST00000256474 MINOS1Q5TGZ0 78 aa10.36□□□□□ -0.75
VHL-201ENST00000256474 MINOS1-NBL1R4GNA1 71 aa10.36□□□□□ -0.75
VHL-201ENST00000256474 AKAP9Q99996 3911 aa10.36□□□□□ -0.75
VHL-201ENST00000256474 C9orf118A6NHY6 69 aa10.36□□□□□ -0.75
VHL-201ENST00000256474 GNRH2O43555 120 aa10.36□□□□□ -0.75
VHL-201ENST00000256474 ODF1Q14990 250 aa10.36□□□□□ -0.75
VHL-201ENST00000256474 SIRPDQ9H106 197 aa10.36□□□□□ -0.75
VHL-201ENST00000256474 SAMD5Q5TGI4 173 aa10.35□□□□□ -0.75
VHL-201ENST00000256474 AMTNQ6UX39 209 aa10.35□□□□□ -0.75
VHL-201ENST00000256474 AGRNO00468 2067 aa10.35□□□□□ -0.75
VHL-201ENST00000256474 UBE2E1P51965 193 aa10.35□□□□□ -0.75
VHL-201ENST00000256474 SMAGPQ0VAQ4 97 aa10.35□□□□□ -0.75
VHL-201ENST00000256474 TMEM95Q3KNT9 176 aa10.35□□□□□ -0.75
VHL-201ENST00000256474 OR10J6PQ8NGY7 276 aa10.35□□□□□ -0.75
VHL-201ENST00000256474 SLC50A1Q9BRV3 221 aa10.35□□□□□ -0.75
VHL-201ENST00000256474 NACAE9PAV3 2078 aa10.35□□□□□ -0.75
VHL-201ENST00000256474 ITPR1Q14643 2758 aa10.35□□□□□ -0.75
VHL-201ENST00000256474 CLPSL1A2RUU4 121 aa10.35□□□□□ -0.75
VHL-201ENST00000256474 SCGB3A1Q96QR1 104 aa10.35□□□□□ -0.75
VHL-201ENST00000256474 TRAV8-2A0A0B4J237 113 aa10.34□□□□□ -0.75
VHL-201ENST00000256474 CENPVL3A0A0U1RRI6 287 aa10.34□□□□□ -0.75
VHL-201ENST00000256474 C19orf84I3L1E1 186 aa10.34□□□□□ -0.75
VHL-201ENST00000256474 PPBPP02775 128 aa10.34□□□□□ -0.75
VHL-201ENST00000256474 BLCAPP62952 87 aa10.34□□□□□ -0.75
VHL-201ENST00000256474 LAGE3Q14657 143 aa10.34□□□□□ -0.75
VHL-201ENST00000256474 C11orf71Q6IPW1 123 aa10.34□□□□□ -0.75
VHL-201ENST00000256474 C20orf173Q96LM9 149 aa10.34□□□□□ -0.75
VHL-201ENST00000256474 EDN2P20800 178 aa10.34□□□□□ -0.75
VHL-201ENST00000256474 CDKN1BP46527 198 aa10.34□□□□□ -0.75
VHL-201ENST00000256474 Q8N6K4 173 aa10.34□□□□□ -0.75
VHL-201ENST00000256474 OR9G4Q8NGQ1 327 aa10.34□□□□□ -0.75
VHL-201ENST00000256474 CYSLTR1Q9Y271 337 aa10.34□□□□□ -0.75
VHL-201ENST00000256474 U3KQK5 164 aa10.34□□□□□ -0.75
VHL-201ENST00000256474 TRBV25-1A0A075B6N4 114 aa10.34□□□□□ -0.75
VHL-201ENST00000256474 H3BUX3 64 aa10.34□□□□□ -0.75
VHL-201ENST00000256474 TGFAP01135 160 aa10.34□□□□□ -0.75
VHL-201ENST00000256474 MAPK1IP1LQ8NDC0 245 aa10.34□□□□□ -0.75
VHL-201ENST00000256474 FLNCQ14315 2725 aa10.34□□□□□ -0.75
VHL-201ENST00000256474 A0A087WWL8 130 aa10.33□□□□□ -0.76
VHL-201ENST00000256474 SCGB1D4Q6XE38 83 aa10.33□□□□□ -0.76
VHL-201ENST00000256474 MAPKAPK5-AS1Q8N8E1 139 aa10.33□□□□□ -0.76
VHL-201ENST00000256474 OR4X2Q8NGF9 303 aa10.33□□□□□ -0.76
VHL-201ENST00000256474 OR1N2Q8NGR9 330 aa10.33□□□□□ -0.76
VHL-201ENST00000256474 PKD1L2Q7Z442 2459 aa10.33□□□□□ -0.76
VHL-201ENST00000256474 H3BRM9 83 aa10.33□□□□□ -0.76
VHL-201ENST00000256474 GNLYP22749 145 aa10.33□□□□□ -0.76
VHL-201ENST00000256474 ANXA2RQ3ZCQ2 193 aa10.33□□□□□ -0.76
VHL-201ENST00000256474 Q6ZS46 218 aa10.33□□□□□ -0.76
VHL-201ENST00000256474 ABCA12Q86UK0 2595 aa10.33□□□□□ -0.76
VHL-201ENST00000256474 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.32□□□□□ -0.76
VHL-201ENST00000256474 IGHV4-38-2P0DP08 117 aa10.32□□□□□ -0.76
VHL-201ENST00000256474 JPT2Q9H910 190 aa10.32□□□□□ -0.76
VHL-201ENST00000256474 DUX5Q96PT3 197 aa10.32□□□□□ -0.76
VHL-201ENST00000256474 LRRK2Q5S007 2527 aa10.32□□□□□ -0.76
VHL-201ENST00000256474 CD300EQ496F6 205 aaPredicted RBP10.32□□□□□ -0.76
VHL-201ENST00000256474 ADAMTSL5Q6ZMM2 481 aa10.32□□□□□ -0.76
VHL-201ENST00000256474 Q8N8P6 123 aa10.32□□□□□ -0.76
VHL-201ENST00000256474 LINC01559Q495D7 138 aa10.31□□□□□ -0.76
VHL-201ENST00000256474 ZNF575Q86XF7 245 aa10.31□□□□□ -0.76
VHL-201ENST00000256474 NRGNQ92686 78 aa10.31□□□□□ -0.76
VHL-201ENST00000256474 A0A1W2PPM0 123 aa10.31□□□□□ -0.76
VHL-201ENST00000256474 DPF1Q92782 380 aa10.31□□□□□ -0.76
VHL-201ENST00000256474 GTSF1LQ9H1H1 148 aa10.31□□□□□ -0.76
VHL-201ENST00000256474 SRSF1Q07955 248 aaKnown RBP eCLIP10.31□□□□□ -0.762e-8■■□□□ 13.7
VHL-201ENST00000256474 FBXL19-AS1Q494R0 122 aa10.31□□□□□ -0.76
VHL-201ENST00000256474 OOSP1A8MZH6 123 aa10.3□□□□□ -0.76
VHL-201ENST00000256474 ATP5LO75964 103 aa10.3□□□□□ -0.76
VHL-201ENST00000256474 RAB9AP51151 201 aa10.3□□□□□ -0.76
VHL-201ENST00000256474 LMO4P61968 165 aa10.3□□□□□ -0.76
VHL-201ENST00000256474 C5orf56Q8N8D9 126 aa10.3□□□□□ -0.76
VHL-201ENST00000256474 ZNF256Q9Y2P7 627 aaPredicted RBP10.3□□□□□ -0.76
VHL-201ENST00000256474 K7EP34 96 aa10.3□□□□□ -0.76
VHL-201ENST00000256474 ASIPP42127 132 aa10.3□□□□□ -0.76
VHL-201ENST00000256474 TRAV12-2A0A075B6T6 113 aa10.3□□□□□ -0.76
VHL-201ENST00000256474 TRAV12-3A0A0B4J271 114 aa10.3□□□□□ -0.76
VHL-201ENST00000256474 OR11H12B2RN74 326 aa10.3□□□□□ -0.76
VHL-201ENST00000256474 SRSF9Q13242 221 aaKnown RBP eCLIP10.3□□□□□ -0.761e-11■□□□□ 9.1
VHL-201ENST00000256474 OR11H1Q8NG94 326 aa10.3□□□□□ -0.76
VHL-201ENST00000256474 OR11H2Q8NH07 326 aa10.3□□□□□ -0.76
VHL-201ENST00000256474 LINC00477Q96M19 166 aa10.3□□□□□ -0.76
VHL-201ENST00000256474 HHLA3Q9XRX5 114 aa10.3□□□□□ -0.76
VHL-201ENST00000256474 IGHV4-61A0A0C4DH41 118 aa10.29□□□□□ -0.76
VHL-201ENST00000256474 IGHV7-4-1A0A0J9YVY3 117 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms