RNA–Protein interactions for RNA: ENST00000253193.8

LRP3-201, Transcript of LDL receptor related protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRP3, Length 3,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP3-201ENST00000253193 MRPL35Q9NZE8 188 aaKnown RBP14.18□□□□□ -0.14
LRP3-201ENST00000253193 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP14.17□□□□□ -0.14
LRP3-201ENST00000253193 SRSF1Q07955 248 aaKnown RBP eCLIP14.17□□□□□ -0.14
LRP3-201ENST00000253193 CSTL1Q9H114 145 aa14.17□□□□□ -0.14
LRP3-201ENST00000253193 H3BUX3 64 aa14.17□□□□□ -0.14
LRP3-201ENST00000253193 BOD1L2Q8IYS8 172 aa14.17□□□□□ -0.14
LRP3-201ENST00000253193 HIST1H4GQ99525 98 aa14.17□□□□□ -0.14
LRP3-201ENST00000253193 TRBV12-3P01733 135 aa14.17□□□□□ -0.14
LRP3-201ENST00000253193 ASIPP42127 132 aa14.17□□□□□ -0.14
LRP3-201ENST00000253193 ATP5J2P56134 94 aa14.16□□□□□ -0.14
LRP3-201ENST00000253193 Q8N8P6 123 aa14.16□□□□□ -0.14
LRP3-201ENST00000253193 C9orf118A6NHY6 69 aa14.15□□□□□ -0.14
LRP3-201ENST00000253193 LMO4P61968 165 aa14.15□□□□□ -0.14
LRP3-201ENST00000253193 UNQ9165/PRO28630Q6UXU0 137 aa14.15□□□□□ -0.14
LRP3-201ENST00000253193 GATD1Q8NB37 220 aa14.15□□□□□ -0.14
LRP3-201ENST00000253193 C5orf56Q8N8D9 126 aa14.15□□□□□ -0.14
LRP3-201ENST00000253193 K7ERJ3 54 aa14.15□□□□□ -0.14
LRP3-201ENST00000253193 CHAC1Q9BUX1 264 aa14.15□□□□□ -0.14
LRP3-201ENST00000253193 COL12A1Q99715 3063 aa14.14□□□□□ -0.15
LRP3-201ENST00000253193 IGKV2D-26A0A0A0MRZ7 120 aa14.14□□□□□ -0.15
LRP3-201ENST00000253193 TRAV21A0A0B4J279 112 aa14.14□□□□□ -0.15
LRP3-201ENST00000253193 FAM74A4Q5TZK3 123 aa14.14□□□□□ -0.15
LRP3-201ENST00000253193 UFSP1Q6NVU6 142 aa14.14□□□□□ -0.15
LRP3-201ENST00000253193 CLEC2AQ6UVW9 174 aa14.14□□□□□ -0.15
LRP3-201ENST00000253193 C9orf139Q6ZV77 190 aa14.14□□□□□ -0.15
LRP3-201ENST00000253193 PIMREGQ9BSJ6 248 aa14.14□□□□□ -0.15
LRP3-201ENST00000253193 NPFFR1Q9GZQ6 430 aa14.14□□□□□ -0.15
LRP3-201ENST00000253193 CLPSL1A2RUU4 121 aa14.14□□□□□ -0.15
LRP3-201ENST00000253193 H3BRM9 83 aa14.14□□□□□ -0.15
LRP3-201ENST00000253193 HTN1P15515 57 aa14.14□□□□□ -0.15
LRP3-201ENST00000253193 SCGB1D4Q6XE38 83 aa14.14□□□□□ -0.15
LRP3-201ENST00000253193 MYO18BQ8IUG5 2567 aa14.14□□□□□ -0.15
LRP3-201ENST00000253193 PIEZO1Q92508 2521 aa14.13□□□□□ -0.15
LRP3-201ENST00000253193 ODF1Q14990 250 aa14.13□□□□□ -0.15
LRP3-201ENST00000253193 SAMD5Q5TGI4 173 aa14.13□□□□□ -0.15
LRP3-201ENST00000253193 TRAV8-2A0A0B4J237 113 aa14.13□□□□□ -0.15
LRP3-201ENST00000253193 RBAKDNA6NC62 111 aa14.13□□□□□ -0.15
LRP3-201ENST00000253193 CCL19Q99731 98 aa14.13□□□□□ -0.15
LRP3-201ENST00000253193 NEGR1Q7Z3B1 354 aa14.12□□□□□ -0.15
LRP3-201ENST00000253193 ADAMTSL5Q6ZMM2 481 aa14.12□□□□□ -0.15
LRP3-201ENST00000253193 IGHV1-69DA0A0B4J2H0 117 aa14.12□□□□□ -0.15
LRP3-201ENST00000253193 OR11H12B2RN74 326 aa14.12□□□□□ -0.15
LRP3-201ENST00000253193 C19orf84I3L1E1 186 aa14.12□□□□□ -0.15
LRP3-201ENST00000253193 IGHV1-69P01742 117 aa14.12□□□□□ -0.15
LRP3-201ENST00000253193 OR11H1Q8NG94 326 aa14.12□□□□□ -0.15
LRP3-201ENST00000253193 OR11H2Q8NH07 326 aa14.12□□□□□ -0.15
LRP3-201ENST00000253193 DPF1Q92782 380 aa14.12□□□□□ -0.15
LRP3-201ENST00000253193 BLCAPP62952 87 aa14.11□□□□□ -0.15
LRP3-201ENST00000253193 ANXA2RQ3ZCQ2 193 aa14.11□□□□□ -0.15
LRP3-201ENST00000253193 RHPN1-AS1Q9BWJ2 59 aa14.11□□□□□ -0.15
LRP3-201ENST00000253193 GNRH2O43555 120 aa14.11□□□□□ -0.15
LRP3-201ENST00000253193 USP9XQ93008 2570 aaPredicted RBP14.11□□□□□ -0.15
LRP3-201ENST00000253193 POLQO75417 2590 aa14.11□□□□□ -0.15
LRP3-201ENST00000253193 IGHV4-38-2P0DP08 117 aa14.11□□□□□ -0.15
LRP3-201ENST00000253193 FAM159AQ6UWV7 190 aa14.1□□□□□ -0.15
LRP3-201ENST00000253193 IGHV4-61A0A0C4DH41 118 aa14.1□□□□□ -0.15
LRP3-201ENST00000253193 K7EP34 96 aa14.1□□□□□ -0.15
LRP3-201ENST00000253193 IGHV4-39P01824 125 aa14.1□□□□□ -0.15
LRP3-201ENST00000253193 FXYD2P54710 66 aa14.1□□□□□ -0.15
LRP3-201ENST00000253193 EMP1P54849 157 aa14.1□□□□□ -0.15
LRP3-201ENST00000253193 LINC00477Q96M19 166 aa14.1□□□□□ -0.15
LRP3-201ENST00000253193 FAM223BA6NKX1 122 aa14.1□□□□□ -0.15
LRP3-201ENST00000253193 FAM223AQ8IWN6 122 aa14.1□□□□□ -0.15
LRP3-201ENST00000253193 RPL39LQ96EH5 51 aaKnown RBP14.1□□□□□ -0.15
LRP3-201ENST00000253193 SRSF9Q13242 221 aaKnown RBP eCLIP14.09□□□□□ -0.15
LRP3-201ENST00000253193 SMPXQ9UHP9 88 aa14.09□□□□□ -0.15
LRP3-201ENST00000253193 TRBV25-1A0A075B6N4 114 aa14.09□□□□□ -0.15
LRP3-201ENST00000253193 C20orf173Q96LM9 149 aa14.09□□□□□ -0.15
LRP3-201ENST00000253193 SFTA2Q6UW10 78 aa14.09□□□□□ -0.15
LRP3-201ENST00000253193 CHTOPQ9Y3Y2 248 aaKnown RBP14.09□□□□□ -0.15
LRP3-201ENST00000253193 ZFHX3Q15911 3703 aa14.09□□□□□ -0.15
LRP3-201ENST00000253193 OVOL1O14753 267 aa14.08□□□□□ -0.15
LRP3-201ENST00000253193 SUMO2P61956 95 aaKnown RBP14.08□□□□□ -0.16
LRP3-201ENST00000253193 PRR9Q5T870 116 aa14.08□□□□□ -0.16
LRP3-201ENST00000253193 C9orf47Q6ZRZ4 202 aa14.08□□□□□ -0.16
LRP3-201ENST00000253193 SMIM2Q9BVW6 85 aa14.08□□□□□ -0.16
LRP3-201ENST00000253193 DPH3P1Q9H4G8 78 aa14.08□□□□□ -0.16
LRP3-201ENST00000253193 CD7P09564 240 aa14.07□□□□□ -0.16
LRP3-201ENST00000253193 MYO9AB2RTY4 2548 aa14.07□□□□□ -0.16
LRP3-201ENST00000253193 A0A087WWL8 130 aa14.07□□□□□ -0.16
LRP3-201ENST00000253193 A0A1W2PPM0 123 aa14.07□□□□□ -0.16
LRP3-201ENST00000253193 SIVA1O15304 175 aa14.07□□□□□ -0.16
LRP3-201ENST00000253193 ORMDL2Q53FV1 153 aa14.07□□□□□ -0.16
LRP3-201ENST00000253193 ZNF575Q86XF7 245 aa14.07□□□□□ -0.16
LRP3-201ENST00000253193 CENPEQ02224 2701 aa14.07□□□□□ -0.16
LRP3-201ENST00000253193 TLN2Q9Y4G6 2542 aa14.07□□□□□ -0.16
LRP3-201ENST00000253193 COX8CQ7Z4L0 72 aa14.06□□□□□ -0.16
LRP3-201ENST00000253193 CYSLTR1Q9Y271 337 aa14.06□□□□□ -0.16
LRP3-201ENST00000253193 TRAV12-3A0A0B4J271 114 aa14.06□□□□□ -0.16
LRP3-201ENST00000253193 G3V4G9 280 aa14.06□□□□□ -0.16
LRP3-201ENST00000253193 TMEM95Q3KNT9 176 aa14.06□□□□□ -0.16
LRP3-201ENST00000253193 IGHV7-4-1A0A0J9YVY3 117 aa14.05□□□□□ -0.16
LRP3-201ENST00000253193 TMEM238C9JI98 176 aa14.05□□□□□ -0.16
LRP3-201ENST00000253193 ZNF688P0C7X2 276 aa14.05□□□□□ -0.16
LRP3-201ENST00000253193 ID1P41134 155 aa14.05□□□□□ -0.16
LRP3-201ENST00000253193 ITLN2Q8WWU7 325 aaPredicted RBP14.05□□□□□ -0.16
LRP3-201ENST00000253193 HRNRQ86YZ3 2850 aaPredicted RBP14.05□□□□□ -0.16
LRP3-201ENST00000253193 SRSF2Q01130 221 aaKnown RBP14.05□□□□□ -0.16
LRP3-201ENST00000253193 CD300EQ496F6 205 aaPredicted RBP14.05□□□□□ -0.16
LRP3-201ENST00000253193 H7C1H1 209 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms