RNA–Protein interactions for RNA: ENST00000222402.7

UBE2D4-201, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2D4, Length 3,974 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-201ENST00000222402 DPF1Q92782 380 aa11.52□□□□□ -0.57
UBE2D4-201ENST00000222402 ZFAND3Q9H8U3 227 aa11.52□□□□□ -0.57
UBE2D4-201ENST00000222402 SNRPD3P62318 126 aaKnown RBP11.51□□□□□ -0.57
UBE2D4-201ENST00000222402 LINC01559Q495D7 138 aa11.51□□□□□ -0.57
UBE2D4-201ENST00000222402 K7ERU9 68 aa11.51□□□□□ -0.57
UBE2D4-201ENST00000222402 NDUFA4O00483 81 aa11.51□□□□□ -0.57
UBE2D4-201ENST00000222402 KALRNO60229 2985 aa11.51□□□□□ -0.57
UBE2D4-201ENST00000222402 TRBV12-3P01733 135 aa11.51□□□□□ -0.57
UBE2D4-201ENST00000222402 SMIM13P0DJ93 91 aa11.51□□□□□ -0.57
UBE2D4-201ENST00000222402 SRSF9Q13242 221 aaKnown RBP eCLIP11.51□□□□□ -0.57
UBE2D4-201ENST00000222402 Q8N8P6 123 aa11.51□□□□□ -0.57
UBE2D4-201ENST00000222402 POLQO75417 2590 aa11.51□□□□□ -0.57
UBE2D4-201ENST00000222402 ZFHX4Q86UP3 3567 aa11.51□□□□□ -0.57
UBE2D4-201ENST00000222402 PCP2Q8IVA1 136 aa11.51□□□□□ -0.57
UBE2D4-201ENST00000222402 DAZ1Q9NQZ3 744 aaKnown RBP11.51□□□□□ -0.57
UBE2D4-201ENST00000222402 MAP1AP78559 2803 aaPredicted RBP11.5□□□□□ -0.57
UBE2D4-201ENST00000222402 PKD1L2Q7Z442 2459 aa11.5□□□□□ -0.57
UBE2D4-201ENST00000222402 IGLC6P0CF74 106 aa11.5□□□□□ -0.57
UBE2D4-201ENST00000222402 PCP4P48539 62 aa11.5□□□□□ -0.57
UBE2D4-201ENST00000222402 UNQ9165/PRO28630Q6UXU0 137 aa11.5□□□□□ -0.57
UBE2D4-201ENST00000222402 TMEM8BA6NDV4 472 aa11.5□□□□□ -0.57
UBE2D4-201ENST00000222402 ZNF56Q15929 161 aa11.5□□□□□ -0.57
UBE2D4-201ENST00000222402 PSMG4Q5JS54 123 aa11.5□□□□□ -0.57
UBE2D4-201ENST00000222402 DPH3P1Q9H4G8 78 aa11.5□□□□□ -0.57
UBE2D4-201ENST00000222402 NHP2Q9NX24 153 aaKnown RBP11.5□□□□□ -0.57
UBE2D4-201ENST00000222402 IGHV4-30-2A0A087WSY4 118 aa11.5□□□□□ -0.57
UBE2D4-201ENST00000222402 ANXA2RQ3ZCQ2 193 aa11.5□□□□□ -0.57
UBE2D4-201ENST00000222402 LRRK2Q5S007 2527 aa11.49□□□□□ -0.57
UBE2D4-201ENST00000222402 COX6B1P14854 86 aa11.49□□□□□ -0.57
UBE2D4-201ENST00000222402 KIR3DS1Q14943 382 aa11.49□□□□□ -0.57
UBE2D4-201ENST00000222402 KIR2DL4Q99706 377 aa11.49□□□□□ -0.57
UBE2D4-201ENST00000222402 SONP18583 2426 aaKnown RBP11.49□□□□□ -0.57
UBE2D4-201ENST00000222402 TRAV12-3A0A0B4J271 114 aa11.49□□□□□ -0.57
UBE2D4-201ENST00000222402 IGKV3D-20A0A0C4DH25 116 aa11.49□□□□□ -0.57
UBE2D4-201ENST00000222402 ORMDL2Q53FV1 153 aa11.49□□□□□ -0.57
UBE2D4-201ENST00000222402 WNK1Q9H4A3 2382 aa11.49□□□□□ -0.57
UBE2D4-201ENST00000222402 TMEM95Q3KNT9 176 aa11.49□□□□□ -0.57
UBE2D4-201ENST00000222402 DEFB125Q8N687 156 aa11.48□□□□□ -0.57
UBE2D4-201ENST00000222402 DUX5Q96PT3 197 aa11.48□□□□□ -0.57
UBE2D4-201ENST00000222402 SMPXQ9UHP9 88 aa11.48□□□□□ -0.57
UBE2D4-201ENST00000222402 ZNF256Q9Y2P7 627 aaPredicted RBP11.48□□□□□ -0.57
UBE2D4-201ENST00000222402 SPCS1Q9Y6A9 102 aa11.48□□□□□ -0.57
UBE2D4-201ENST00000222402 NDUFS8O00217 210 aa11.48□□□□□ -0.57
UBE2D4-201ENST00000222402 C16orf54Q6UWD8 224 aa11.48□□□□□ -0.57
UBE2D4-201ENST00000222402 MRPL35Q9NZE8 188 aaKnown RBP11.48□□□□□ -0.57
UBE2D4-201ENST00000222402 HERVK_113P61574 105 aa11.47□□□□□ -0.57
UBE2D4-201ENST00000222402 MRPL53Q96EL3 112 aaKnown RBP11.47□□□□□ -0.57
UBE2D4-201ENST00000222402 SETD2Q9BYW2 2564 aaPredicted RBP11.47□□□□□ -0.57
UBE2D4-201ENST00000222402 TTTY13Q9BZ97 58 aa11.47□□□□□ -0.57
UBE2D4-201ENST00000222402 SYT8Q8NBV8 401 aa11.47□□□□□ -0.57
UBE2D4-201ENST00000222402 NRGNQ92686 78 aa11.46□□□□□ -0.57
UBE2D4-201ENST00000222402 CHTOPQ9Y3Y2 248 aaKnown RBP11.46□□□□□ -0.57
UBE2D4-201ENST00000222402 PPP1R17O96001 155 aa11.46□□□□□ -0.57
UBE2D4-201ENST00000222402 SUMO2P61956 95 aaKnown RBP11.46□□□□□ -0.57
UBE2D4-201ENST00000222402 LRBAP50851 2863 aa11.46□□□□□ -0.58
UBE2D4-201ENST00000222402 A0A087WWL8 130 aa11.46□□□□□ -0.58
UBE2D4-201ENST00000222402 GNRH2O43555 120 aa11.46□□□□□ -0.58
UBE2D4-201ENST00000222402 GAS8-AS1O95177 125 aa11.46□□□□□ -0.58
UBE2D4-201ENST00000222402 C10orf105Q8TEF2 133 aa11.46□□□□□ -0.58
UBE2D4-201ENST00000222402 TAX1BP3O14907 124 aa11.45□□□□□ -0.58
UBE2D4-201ENST00000222402 C9orf47Q6ZRZ4 202 aa11.45□□□□□ -0.58
UBE2D4-201ENST00000222402 CSTL1Q9H114 145 aa11.45□□□□□ -0.58
UBE2D4-201ENST00000222402 IGF1P05019 195 aa11.45□□□□□ -0.58
UBE2D4-201ENST00000222402 SMIM2Q9BVW6 85 aa11.45□□□□□ -0.58
UBE2D4-201ENST00000222402 NEGR1Q7Z3B1 354 aa11.45□□□□□ -0.58
UBE2D4-201ENST00000222402 MRAP2Q96G30 205 aa11.45□□□□□ -0.58
UBE2D4-201ENST00000222402 SPOCK3Q9BQ16 436 aa11.44□□□□□ -0.58
UBE2D4-201ENST00000222402 CHAC1Q9BUX1 264 aa11.44□□□□□ -0.58
UBE2D4-201ENST00000222402 C2CD3Q4AC94 2353 aa11.44□□□□□ -0.58
UBE2D4-201ENST00000222402 IGHV7-4-1A0A0J9YVY3 117 aa11.44□□□□□ -0.58
UBE2D4-201ENST00000222402 TMEM170BQ5T4T1 132 aa11.44□□□□□ -0.58
UBE2D4-201ENST00000222402 GAGE12BA1L429 117 aa11.44□□□□□ -0.58
UBE2D4-201ENST00000222402 CLPSL1A2RUU4 121 aa11.44□□□□□ -0.58
UBE2D4-201ENST00000222402 AJUBAQ96IF1 538 aa11.44□□□□□ -0.58
UBE2D4-201ENST00000222402 JMJD8Q96S16 334 aa11.44□□□□□ -0.58
UBE2D4-201ENST00000222402 C11orf21Q9P2W6 132 aa11.44□□□□□ -0.58
UBE2D4-201ENST00000222402 CYSLTR1Q9Y271 337 aa11.44□□□□□ -0.58
UBE2D4-201ENST00000222402 TRAV8-2A0A0B4J237 113 aa11.43□□□□□ -0.58
UBE2D4-201ENST00000222402 SYNJ2BPP57105 145 aa11.43□□□□□ -0.58
UBE2D4-201ENST00000222402 DYNLRB2Q8TF09 96 aa11.43□□□□□ -0.58
UBE2D4-201ENST00000222402 EMP1P54849 157 aa11.43□□□□□ -0.58
UBE2D4-201ENST00000222402 Q6ZQT7 251 aa11.43□□□□□ -0.58
UBE2D4-201ENST00000222402 RNF185Q96GF1 192 aa11.43□□□□□ -0.58
UBE2D4-201ENST00000222402 U3KQK5 164 aa11.43□□□□□ -0.58
UBE2D4-201ENST00000222402 H7C1H1 209 aa11.43□□□□□ -0.58
UBE2D4-201ENST00000222402 IGHV4-59P01825 116 aa11.43□□□□□ -0.58
UBE2D4-201ENST00000222402 LENEPQ9Y5L5 61 aa11.43□□□□□ -0.58
UBE2D4-201ENST00000222402 CD300EQ496F6 205 aaPredicted RBP11.42□□□□□ -0.58
UBE2D4-201ENST00000222402 C2orf66Q6UXQ4 117 aa11.42□□□□□ -0.58
UBE2D4-201ENST00000222402 PLNP26678 52 aa11.42□□□□□ -0.58
UBE2D4-201ENST00000222402 RPL39LQ96EH5 51 aaKnown RBP11.42□□□□□ -0.58
UBE2D4-201ENST00000222402 TRAV12-2A0A075B6T6 113 aa11.42□□□□□ -0.58
UBE2D4-201ENST00000222402 IGHG2P01859 326 aa11.42□□□□□ -0.58
UBE2D4-201ENST00000222402 IGHG4P01861 327 aa11.42□□□□□ -0.58
UBE2D4-201ENST00000222402 SRSF2Q01130 221 aaKnown RBP11.42□□□□□ -0.58
UBE2D4-201ENST00000222402 SAMD5Q5TGI4 173 aa11.42□□□□□ -0.58
UBE2D4-201ENST00000222402 NOTCH2Q04721 2471 aa11.41□□□□□ -0.58
UBE2D4-201ENST00000222402 SAMD13Q5VXD3 122 aa11.41□□□□□ -0.58
UBE2D4-201ENST00000222402 C20orf173Q96LM9 149 aa11.41□□□□□ -0.58
UBE2D4-201ENST00000222402 BOD1L2Q8IYS8 172 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 97.2 ms