RNA–Protein interactions for RNA: ENST00000219281.7

USB1-201, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USB1, Length 2,282 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-201ENST00000219281 H3BVH4 76 aa13.19□□□□□ -0.3
USB1-201ENST00000219281 PRR9Q5T870 116 aa13.19□□□□□ -0.3
USB1-201ENST00000219281 TMEM219Q86XT9 240 aa13.19□□□□□ -0.3
USB1-201ENST00000219281 C5orf56Q8N8D9 126 aa13.19□□□□□ -0.3
USB1-201ENST00000219281 LINC00527Q9UJ94 153 aa13.19□□□□□ -0.3
USB1-201ENST00000219281 ACACBO00763 2458 aa13.19□□□□□ -0.3
USB1-201ENST00000219281 J3KRW8 73 aa13.18□□□□□ -0.3
USB1-201ENST00000219281 NPFFO15130 113 aa13.18□□□□□ -0.3
USB1-201ENST00000219281 LMO4P61968 165 aa13.18□□□□□ -0.3
USB1-201ENST00000219281 BPESC1Q9GZL8 116 aa13.18□□□□□ -0.3
USB1-201ENST00000219281 IGF1P05019 195 aa13.18□□□□□ -0.3
USB1-201ENST00000219281 SAMD5Q5TGI4 173 aa13.18□□□□□ -0.3
USB1-201ENST00000219281 ZFHX3Q15911 3703 aa13.17□□□□□ -0.3
USB1-201ENST00000219281 IGHV4-4A0A075B6R2 117 aa13.17□□□□□ -0.3
USB1-201ENST00000219281 C20orf173Q96LM9 149 aa13.17□□□□□ -0.3
USB1-201ENST00000219281 K7ERJ3 54 aa13.16□□□□□ -0.3
USB1-201ENST00000219281 FABP2P12104 132 aa13.16□□□□□ -0.3
USB1-201ENST00000219281 SRSF1Q07955 248 aaKnown RBP eCLIP13.16□□□□□ -0.3
USB1-201ENST00000219281 SPRY2O43597 315 aa13.16□□□□□ -0.3
USB1-201ENST00000219281 CACNA1BQ00975 2339 aa13.15□□□□□ -0.3
USB1-201ENST00000219281 IGHV3OR16-10A0A075B7F0 116 aa13.15□□□□□ -0.3
USB1-201ENST00000219281 MAPKAPK5-AS1Q8N8E1 139 aa13.15□□□□□ -0.3
USB1-201ENST00000219281 OR5A1Q8NGJ0 315 aa13.15□□□□□ -0.3
USB1-201ENST00000219281 A0A087WX48 190 aa13.15□□□□□ -0.3
USB1-201ENST00000219281 TRAV41A0A0B4J266 112 aa13.15□□□□□ -0.3
USB1-201ENST00000219281 FLNCQ14315 2725 aa13.15□□□□□ -0.3
USB1-201ENST00000219281 K7EMI3 77 aa13.14□□□□□ -0.31
USB1-201ENST00000219281 GLMPQ8WWB7 406 aa13.14□□□□□ -0.31
USB1-201ENST00000219281 CEND1Q8N111 149 aa13.14□□□□□ -0.31
USB1-201ENST00000219281 NHP2Q9NX24 153 aaKnown RBP13.14□□□□□ -0.31
USB1-201ENST00000219281 IGHV4-39P01824 125 aa13.13□□□□□ -0.31
USB1-201ENST00000219281 ARL3P36405 182 aa13.13□□□□□ -0.31
USB1-201ENST00000219281 C9orf139Q6ZV77 190 aa13.13□□□□□ -0.31
USB1-201ENST00000219281 NEGR1Q7Z3B1 354 aa13.13□□□□□ -0.31
USB1-201ENST00000219281 MRAP2Q96G30 205 aa13.13□□□□□ -0.31
USB1-201ENST00000219281 G3V4G9 280 aa13.13□□□□□ -0.31
USB1-201ENST00000219281 M0R381 172 aa13.13□□□□□ -0.31
USB1-201ENST00000219281 HLA-DRB4P13762 266 aa13.13□□□□□ -0.31
USB1-201ENST00000219281 RIPPLY3P57055 190 aa13.13□□□□□ -0.31
USB1-201ENST00000219281 DEFB1P60022 68 aa13.13□□□□□ -0.31
USB1-201ENST00000219281 PHLDA1Q8WV24 401 aaPredicted RBP13.13□□□□□ -0.31
USB1-201ENST00000219281 SMIM2Q9BVW6 85 aa13.13□□□□□ -0.31
USB1-201ENST00000219281 TM2D2Q9BX73 214 aa13.13□□□□□ -0.31
USB1-201ENST00000219281 CSTL1Q9H114 145 aa13.13□□□□□ -0.31
USB1-201ENST00000219281 HLA-DRB4X5D2U9 266 aa13.13□□□□□ -0.31
USB1-201ENST00000219281 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.12□□□□□ -0.31
USB1-201ENST00000219281 TRBV12-3P01733 135 aa13.12□□□□□ -0.31
USB1-201ENST00000219281 UNQ9165/PRO28630Q6UXU0 137 aa13.12□□□□□ -0.31
USB1-201ENST00000219281 KLK15Q9H2R5 256 aa13.12□□□□□ -0.31
USB1-201ENST00000219281 MOB4Q9Y3A3 225 aa13.12□□□□□ -0.31
USB1-201ENST00000219281 CELSR1Q9NYQ6 3014 aa13.12□□□□□ -0.31
USB1-201ENST00000219281 USP9XQ93008 2570 aaPredicted RBP13.11□□□□□ -0.31
USB1-201ENST00000219281 FAM223BA6NKX1 122 aa13.11□□□□□ -0.31
USB1-201ENST00000219281 FAM223AQ8IWN6 122 aa13.11□□□□□ -0.31
USB1-201ENST00000219281 C19orf54Q5BKX5 351 aa13.11□□□□□ -0.31
USB1-201ENST00000219281 GPHB5Q86YW7 130 aa13.11□□□□□ -0.31
USB1-201ENST00000219281 ZFAND2AQ8N6M9 145 aa13.11□□□□□ -0.31
USB1-201ENST00000219281 SPG11Q96JI7 2443 aa13.1□□□□□ -0.31
USB1-201ENST00000219281 PLNP26678 52 aa13.1□□□□□ -0.31
USB1-201ENST00000219281 LINC00477Q96M19 166 aa13.1□□□□□ -0.31
USB1-201ENST00000219281 LENEPQ9Y5L5 61 aa13.1□□□□□ -0.31
USB1-201ENST00000219281 S100A4P26447 101 aaKnown RBP13.1□□□□□ -0.31
USB1-201ENST00000219281 OR10J6PQ8NGY7 276 aa13.1□□□□□ -0.31
USB1-201ENST00000219281 RASL10AQ92737 203 aa13.1□□□□□ -0.31
USB1-201ENST00000219281 DOPEY1Q5JWR5 2465 aa13.09□□□□□ -0.31
USB1-201ENST00000219281 H7C1H1 209 aa13.09□□□□□ -0.31
USB1-201ENST00000219281 C14orf178Q8N769 122 aaPredicted RBP13.09□□□□□ -0.31
USB1-201ENST00000219281 RPL39LQ96EH5 51 aaKnown RBP13.09□□□□□ -0.31
USB1-201ENST00000219281 TRAV21A0A0B4J279 112 aa13.09□□□□□ -0.31
USB1-201ENST00000219281 SUMO2P61956 95 aaKnown RBP13.09□□□□□ -0.31
USB1-201ENST00000219281 SCGB3A1Q96QR1 104 aa13.09□□□□□ -0.31
USB1-201ENST00000219281 F8VRH5 84 aa13.08□□□□□ -0.32
USB1-201ENST00000219281 ASIPP42127 132 aa13.08□□□□□ -0.32
USB1-201ENST00000219281 ANXA2RQ3ZCQ2 193 aa13.08□□□□□ -0.32
USB1-201ENST00000219281 ORMDL2Q53FV1 153 aa13.08□□□□□ -0.32
USB1-201ENST00000219281 BRD3OSQ6XYD6 125 aa13.08□□□□□ -0.32
USB1-201ENST00000219281 ATP6V0BQ99437 205 aa13.08□□□□□ -0.32
USB1-201ENST00000219281 TRAV12-1A0A0B4J245 112 aa13.08□□□□□ -0.32
USB1-201ENST00000219281 OVOL1O14753 267 aa13.08□□□□□ -0.32
USB1-201ENST00000219281 RPL11P62913 178 aaKnown RBP13.08□□□□□ -0.32
USB1-201ENST00000219281 TOMM6Q96B49 74 aa13.08□□□□□ -0.32
USB1-201ENST00000219281 DPH3P1Q9H4G8 78 aa13.08□□□□□ -0.32
USB1-201ENST00000219281 CHTOPQ9Y3Y2 248 aaKnown RBP13.08□□□□□ -0.32
USB1-201ENST00000219281 PHLDA3Q9Y5J5 127 aa13.08□□□□□ -0.32
USB1-201ENST00000219281 CRYBG3Q68DQ2 2970 aa13.07□□□□□ -0.32
USB1-201ENST00000219281 SOCS3O14543 225 aa13.07□□□□□ -0.32
USB1-201ENST00000219281 MGPP08493 103 aa13.07□□□□□ -0.32
USB1-201ENST00000219281 RNASE4P34096 147 aaKnown RBP13.07□□□□□ -0.32
USB1-201ENST00000219281 HIST1H4GQ99525 98 aa13.07□□□□□ -0.32
USB1-201ENST00000219281 ABCA2Q9BZC7 2435 aa13.07□□□□□ -0.32
USB1-201ENST00000219281 IGKV3-7A0A075B6H7 116 aa13.06□□□□□ -0.32
USB1-201ENST00000219281 F6UB75 175 aa13.06□□□□□ -0.32
USB1-201ENST00000219281 NDUFA4O00483 81 aa13.06□□□□□ -0.32
USB1-201ENST00000219281 IGHV3-11P01762 117 aa13.06□□□□□ -0.32
USB1-201ENST00000219281 MAP1AP78559 2803 aaPredicted RBP13.06□□□□□ -0.32
USB1-201ENST00000219281 IGLL5B9A064 214 aa13.06□□□□□ -0.32
USB1-201ENST00000219281 GNRH2O43555 120 aa13.06□□□□□ -0.32
USB1-201ENST00000219281 CRIP2P52943 208 aaPredicted RBP13.06□□□□□ -0.32
USB1-201ENST00000219281 TAL2Q16559 108 aa13.06□□□□□ -0.32
USB1-201ENST00000219281 C20orf78Q9BR46 151 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms