RNA–Protein interactions for RNA: ENST00000639695.1

RFC1-217, Transcript of replication factor C subunit 1, humanhuman

TSL 5 BASIC

Gene RFC1, Length 867 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-217ENST00000639695 LINC00311Q8N616 119 aa2.84□□□□□ -1.95
RFC1-217ENST00000639695 S100A13Q99584 98 aa2.84□□□□□ -1.95
RFC1-217ENST00000639695 ZFP30Q9Y2G7 519 aa2.84□□□□□ -1.95
RFC1-217ENST00000639695 LY96Q9Y6Y9 160 aa2.84□□□□□ -1.95
RFC1-217ENST00000639695 ZNF142P52746 1687 aaPredicted RBP2.84□□□□□ -1.95
RFC1-217ENST00000639695 PREX1Q8TCU6 1659 aa2.84□□□□□ -1.95
RFC1-217ENST00000639695 PARP4Q9UKK3 1724 aaKnown RBP2.84□□□□□ -1.96
RFC1-217ENST00000639695 NFAT5O94916 1531 aa2.83□□□□□ -1.96
RFC1-217ENST00000639695 CPS1P31327 1500 aa2.83□□□□□ -1.96
RFC1-217ENST00000639695 AGLP35573 1532 aa2.83□□□□□ -1.96
RFC1-217ENST00000639695 ARHGAP5Q13017 1502 aa2.83□□□□□ -1.96
RFC1-217ENST00000639695 SHPRHQ149N8 1683 aa2.83□□□□□ -1.96
RFC1-217ENST00000639695 LAMB4A4D0S4 1761 aa2.83□□□□□ -1.96
RFC1-217ENST00000639695 A0A096LPI6 279 aa2.83□□□□□ -1.96
RFC1-217ENST00000639695 BRS3P32247 399 aa2.83□□□□□ -1.96
RFC1-217ENST00000639695 RRAS2P62070 204 aaPredicted RBP2.83□□□□□ -1.96
RFC1-217ENST00000639695 HBBP68871 147 aa2.83□□□□□ -1.96
RFC1-217ENST00000639695 NEDD8Q15843 81 aa2.83□□□□□ -1.96
RFC1-217ENST00000639695 Q5BKY6 102 aa2.83□□□□□ -1.96
RFC1-217ENST00000639695 COL5A1-AS1Q5SY13 56 aa2.83□□□□□ -1.96
RFC1-217ENST00000639695 ZNF418Q8TF45 676 aaPredicted RBP2.83□□□□□ -1.96
RFC1-217ENST00000639695 TCEAL2Q9H3H9 227 aaPredicted RBP2.83□□□□□ -1.96
RFC1-217ENST00000639695 SMCO4Q9NRQ5 59 aa2.83□□□□□ -1.96
RFC1-217ENST00000639695 CASKIN1Q8WXD9 1431 aa2.83□□□□□ -1.96
RFC1-217ENST00000639695 USP32Q8NFA0 1604 aa2.82□□□□□ -1.96
RFC1-217ENST00000639695 KNDC1Q76NI1 1749 aa2.82□□□□□ -1.96
RFC1-217ENST00000639695 PTPRFP10586 1907 aa2.82□□□□□ -1.96
RFC1-217ENST00000639695 A0A0G2JND7 137 aa2.82□□□□□ -1.96
RFC1-217ENST00000639695 F6UZH7 168 aa2.82□□□□□ -1.96
RFC1-217ENST00000639695 OR1I1O60431 355 aa2.82□□□□□ -1.96
RFC1-217ENST00000639695 IGF2P01344 180 aa2.82□□□□□ -1.96
RFC1-217ENST00000639695 MT-ND4LP03901 98 aa2.82□□□□□ -1.96
RFC1-217ENST00000639695 POLR2HP52434 150 aaKnown RBP2.82□□□□□ -1.96
RFC1-217ENST00000639695 DCDP81605 110 aaKnown RBP2.82□□□□□ -1.96
RFC1-217ENST00000639695 EIF3IQ13347 325 aaKnown RBP2.82□□□□□ -1.96
RFC1-217ENST00000639695 HMGN3Q15651 99 aa2.82□□□□□ -1.96
RFC1-217ENST00000639695 REG4Q9BYZ8 158 aa2.82□□□□□ -1.96
RFC1-217ENST00000639695 OTORQ9NRC9 128 aa2.82□□□□□ -1.96
RFC1-217ENST00000639695 NAT8BQ9UHF3 227 aa2.82□□□□□ -1.96
RFC1-217ENST00000639695 RNF11Q9Y3C5 154 aa2.82□□□□□ -1.96
RFC1-217ENST00000639695 MED31Q9Y3C7 131 aa2.82□□□□□ -1.96
RFC1-217ENST00000639695 FN1P02751 2386 aaKnown RBP2.82□□□□□ -1.96
RFC1-217ENST00000639695 IQGAP3Q86VI3 1631 aa2.82□□□□□ -1.96
RFC1-217ENST00000639695 USP54Q70EL1 1684 aa2.82□□□□□ -1.96
RFC1-217ENST00000639695 LAMB1P07942 1786 aa2.82□□□□□ -1.96
RFC1-217ENST00000639695 SCN11AQ9UI33 1791 aa2.82□□□□□ -1.96
RFC1-217ENST00000639695 NUP98P52948 1817 aa2.82□□□□□ -1.96
RFC1-217ENST00000639695 MYO5AQ9Y4I1 1855 aaKnown RBP2.82□□□□□ -1.96
RFC1-217ENST00000639695 TRGV2A0A075B6R0 118 aa2.81□□□□□ -1.96
RFC1-217ENST00000639695 GABARAPH6UMI1 98 aa2.81□□□□□ -1.96
RFC1-217ENST00000639695 NDUFA6P56556 154 aa2.81□□□□□ -1.96
RFC1-217ENST00000639695 ZNF720Q7Z2F6 126 aa2.81□□□□□ -1.96
RFC1-217ENST00000639695 OR2T35Q8NGX2 323 aa2.81□□□□□ -1.96
RFC1-217ENST00000639695 CARD19Q96LW7 228 aa2.81□□□□□ -1.96
RFC1-217ENST00000639695 CCDC115Q96NT0 180 aa2.81□□□□□ -1.96
RFC1-217ENST00000639695 RETNLBQ9BQ08 111 aa2.81□□□□□ -1.96
RFC1-217ENST00000639695 BCL9LQ86UU0 1499 aa2.81□□□□□ -1.96
RFC1-217ENST00000639695 NEXMIFQ5QGS0 1516 aa2.81□□□□□ -1.96
RFC1-217ENST00000639695 GLI2P10070 1586 aa2.81□□□□□ -1.96
RFC1-217ENST00000639695 KIAA0556O60303 1618 aa2.81□□□□□ -1.96
RFC1-217ENST00000639695 CLTCQ00610 1675 aaKnown RBP2.81□□□□□ -1.96
RFC1-217ENST00000639695 FMN2Q9NZ56 1722 aa2.81□□□□□ -1.96
RFC1-217ENST00000639695 LTN1O94822 1766 aa2.81□□□□□ -1.96
RFC1-217ENST00000639695 PCNX2A6NKB5 2137 aa2.81□□□□□ -1.96
RFC1-217ENST00000639695 FER1L6Q2WGJ9 1857 aa2.8□□□□□ -1.96
RFC1-217ENST00000639695 CDC42BPGQ6DT37 1551 aa2.8□□□□□ -1.96
RFC1-217ENST00000639695 EDC4Q6P2E9 1401 aaKnown RBP2.8□□□□□ -1.96
RFC1-217ENST00000639695 TRAV12-1A0A0B4J245 112 aa2.8□□□□□ -1.96
RFC1-217ENST00000639695 TRBV6-5A0A0K0K1A5 114 aa2.8□□□□□ -1.96
RFC1-217ENST00000639695 C17orf112F2Z3M2 114 aa2.8□□□□□ -1.96
RFC1-217ENST00000639695 K7ERJ3 54 aa2.8□□□□□ -1.96
RFC1-217ENST00000639695 RER1O15258 196 aa2.8□□□□□ -1.96
RFC1-217ENST00000639695 MAXP61244 160 aa2.8□□□□□ -1.96
RFC1-217ENST00000639695 UBA52P62987 128 aaKnown RBP2.8□□□□□ -1.96
RFC1-217ENST00000639695 KLRD1Q13241 179 aa2.8□□□□□ -1.96
RFC1-217ENST00000639695 IQCJQ1A5X6 159 aa2.8□□□□□ -1.96
RFC1-217ENST00000639695 PYY3Q5JQD4 70 aa2.8□□□□□ -1.96
RFC1-217ENST00000639695 FAM74A1Q5RGS3 127 aa2.8□□□□□ -1.96
RFC1-217ENST00000639695 NCMAPQ5T1S8 102 aa2.8□□□□□ -1.96
RFC1-217ENST00000639695 Q6ZRN7 208 aaPredicted RBP2.8□□□□□ -1.96
RFC1-217ENST00000639695 PHF5AQ7RTV0 110 aaKnown RBP2.8□□□□□ -1.96
RFC1-217ENST00000639695 Q8IYB0 196 aa2.8□□□□□ -1.96
RFC1-217ENST00000639695 TMEM254Q8TBM7 123 aa2.8□□□□□ -1.96
RFC1-217ENST00000639695 Q96M85 177 aa2.8□□□□□ -1.96
RFC1-217ENST00000639695 SPANXCQ9NY87 97 aa2.8□□□□□ -1.96
RFC1-217ENST00000639695 EML6Q6ZMW3 1958 aa2.8□□□□□ -1.96
RFC1-217ENST00000639695 MROH2AA6NES4 1674 aa2.79□□□□□ -1.96
RFC1-217ENST00000639695 ABCC1P33527 1531 aa2.79□□□□□ -1.96
RFC1-217ENST00000639695 C10orf71Q711Q0 1435 aa2.79□□□□□ -1.96
RFC1-217ENST00000639695 TRAV30A0A087WSZ9 112 aa2.79□□□□□ -1.96
RFC1-217ENST00000639695 C2orf70A6NJV1 201 aa2.79□□□□□ -1.96
RFC1-217ENST00000639695 OVOL1O14753 267 aa2.79□□□□□ -1.96
RFC1-217ENST00000639695 LYZL6O75951 148 aa2.79□□□□□ -1.96
RFC1-217ENST00000639695 NMBP08949 121 aa2.79□□□□□ -1.96
RFC1-217ENST00000639695 FABP2P12104 132 aa2.79□□□□□ -1.96
RFC1-217ENST00000639695 CMPK1P30085 196 aa2.79□□□□□ -1.96
RFC1-217ENST00000639695 SDC2P34741 201 aa2.79□□□□□ -1.96
RFC1-217ENST00000639695 CDK6Q00534 326 aa2.79□□□□□ -1.96
RFC1-217ENST00000639695 PDE6HQ13956 83 aa2.79□□□□□ -1.96
RFC1-217ENST00000639695 OCIAD2Q56VL3 154 aa2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms