RNA–Protein interactions for RNA: ENST00000636549.1

CACNA1A-227, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,792 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-227ENST00000636549 DOPEY2Q9Y3R5 2298 aa14.18□□□□□ -0.14
CACNA1A-227ENST00000636549 COX7B2Q8TF08 81 aa14.18□□□□□ -0.14
CACNA1A-227ENST00000636549 FAM110AQ9BQ89 295 aa14.18□□□□□ -0.14
CACNA1A-227ENST00000636549 C3orf79P0CE67 100 aa14.17□□□□□ -0.14
CACNA1A-227ENST00000636549 ZNF124Q15973 351 aa14.17□□□□□ -0.14
CACNA1A-227ENST00000636549 NDUFA12Q9UI09 145 aa14.17□□□□□ -0.14
CACNA1A-227ENST00000636549 DOCK8Q8NF50 2099 aa14.17□□□□□ -0.14
CACNA1A-227ENST00000636549 PFN1P07737 140 aaKnown RBP14.17□□□□□ -0.14
CACNA1A-227ENST00000636549 GBF1Q92538 1859 aa14.17□□□□□ -0.14
CACNA1A-227ENST00000636549 CYYR1Q96J86 154 aa14.17□□□□□ -0.14
CACNA1A-227ENST00000636549 ICOSQ9Y6W8 199 aa14.17□□□□□ -0.14
CACNA1A-227ENST00000636549 PLXND1Q9Y4D7 1925 aa14.17□□□□□ -0.14
CACNA1A-227ENST00000636549 A0A1B0GW64 132 aa14.17□□□□□ -0.14
CACNA1A-227ENST00000636549 C15orf62A8K5M9 175 aa14.17□□□□□ -0.14
CACNA1A-227ENST00000636549 PRSS33Q8NF86 280 aa14.17□□□□□ -0.14
CACNA1A-227ENST00000636549 ZNF134P52741 427 aa14.17□□□□□ -0.14
CACNA1A-227ENST00000636549 HIST1H2BLQ99880 126 aa14.17□□□□□ -0.14
CACNA1A-227ENST00000636549 LY6G6FQ5SQ64 297 aa14.16□□□□□ -0.14
CACNA1A-227ENST00000636549 TMEM14BQ9NUH8 114 aa14.16□□□□□ -0.14
CACNA1A-227ENST00000636549 CEP250Q9BV73 2442 aa14.16□□□□□ -0.14
CACNA1A-227ENST00000636549 MED12Q93074 2177 aa14.16□□□□□ -0.14
CACNA1A-227ENST00000636549 MRPL51Q4U2R6 128 aaKnown RBP14.15□□□□□ -0.14
CACNA1A-227ENST00000636549 KLF2Q9Y5W3 355 aaPredicted RBP14.15□□□□□ -0.14
CACNA1A-227ENST00000636549 TSC2P49815 1807 aa14.15□□□□□ -0.14
CACNA1A-227ENST00000636549 DAND5Q8N907 189 aa14.15□□□□□ -0.14
CACNA1A-227ENST00000636549 CARHSP1Q9Y2V2 147 aaKnown RBP14.15□□□□□ -0.14
CACNA1A-227ENST00000636549 WISP1O95388 367 aa14.15□□□□□ -0.14
CACNA1A-227ENST00000636549 HRCT1Q6UXD1 115 aa14.15□□□□□ -0.14
CACNA1A-227ENST00000636549 LINC01551Q86U37 167 aa14.15□□□□□ -0.14
CACNA1A-227ENST00000636549 KLK5Q9Y337 293 aaPredicted RBP14.15□□□□□ -0.14
CACNA1A-227ENST00000636549 LINC01549A6NIU2 74 aa14.15□□□□□ -0.14
CACNA1A-227ENST00000636549 AMBPP02760 352 aa14.15□□□□□ -0.14
CACNA1A-227ENST00000636549 RBM3P98179 157 aaKnown RBP14.15□□□□□ -0.14
CACNA1A-227ENST00000636549 PNRC2Q9NPJ4 139 aaKnown RBP14.15□□□□□ -0.14
CACNA1A-227ENST00000636549 PTPRDP23468 1912 aa14.15□□□□□ -0.14
CACNA1A-227ENST00000636549 RETNQ9HD89 108 aa14.14□□□□□ -0.15
CACNA1A-227ENST00000636549 GREB1LQ9C091 1923 aaPredicted RBP14.14□□□□□ -0.15
CACNA1A-227ENST00000636549 IGKV1-6A0A0C4DH72 117 aa14.14□□□□□ -0.15
CACNA1A-227ENST00000636549 CARD19Q96LW7 228 aa14.14□□□□□ -0.15
CACNA1A-227ENST00000636549 IGHV7-4-1A0A0J9YVY3 117 aa14.14□□□□□ -0.15
CACNA1A-227ENST00000636549 FGF16O43320 207 aa14.14□□□□□ -0.15
CACNA1A-227ENST00000636549 A8MWP6 167 aa14.14□□□□□ -0.15
CACNA1A-227ENST00000636549 SVIPQ8NHG7 77 aa14.14□□□□□ -0.15
CACNA1A-227ENST00000636549 BTCP35070 178 aa14.13□□□□□ -0.15
CACNA1A-227ENST00000636549 IGLV3-32A0A0A0MS00 114 aa14.13□□□□□ -0.15
CACNA1A-227ENST00000636549 B3GALT5-AS1P59052 145 aa14.13□□□□□ -0.15
CACNA1A-227ENST00000636549 WDR90Q96KV7 1748 aa14.13□□□□□ -0.15
CACNA1A-227ENST00000636549 IGLV2-18A0A075B6J9 118 aa14.13□□□□□ -0.15
CACNA1A-227ENST00000636549 VPREB3Q9UKI3 123 aa14.13□□□□□ -0.15
CACNA1A-227ENST00000636549 LCTP09848 1927 aa14.13□□□□□ -0.15
CACNA1A-227ENST00000636549 PRR25Q96S07 402 aa14.13□□□□□ -0.15
CACNA1A-227ENST00000636549 SBF1O95248 1867 aa14.13□□□□□ -0.15
CACNA1A-227ENST00000636549 LYPD3O95274 346 aa14.12□□□□□ -0.15
CACNA1A-227ENST00000636549 CRYBA4P53673 196 aa14.12□□□□□ -0.15
CACNA1A-227ENST00000636549 HIGD2BQ4VC39 106 aa14.12□□□□□ -0.15
CACNA1A-227ENST00000636549 A0A0J9YWU9 116 aa14.12□□□□□ -0.15
CACNA1A-227ENST00000636549 IGLV2-33A0A075B6J2 118 aaPredicted RBP14.12□□□□□ -0.15
CACNA1A-227ENST00000636549 RNF5Q99942 180 aa14.12□□□□□ -0.15
CACNA1A-227ENST00000636549 RHOHQ15669 191 aa14.11□□□□□ -0.15
CACNA1A-227ENST00000636549 MRPL53Q96EL3 112 aaKnown RBP14.11□□□□□ -0.15
CACNA1A-227ENST00000636549 TMEM141Q96I45 108 aa14.11□□□□□ -0.15
CACNA1A-227ENST00000636549 SPRNQ5BIV9 151 aa14.11□□□□□ -0.15
CACNA1A-227ENST00000636549 Q9H8V8 135 aa14.11□□□□□ -0.15
CACNA1A-227ENST00000636549 DOCK11Q5JSL3 2073 aa14.11□□□□□ -0.15
CACNA1A-227ENST00000636549 NDUFA4O00483 81 aa14.11□□□□□ -0.15
CACNA1A-227ENST00000636549 UBE2CO00762 179 aa14.11□□□□□ -0.15
CACNA1A-227ENST00000636549 IGHV4-61A0A0C4DH41 118 aa14.1□□□□□ -0.15
CACNA1A-227ENST00000636549 IGKV4-1P06312 121 aa14.1□□□□□ -0.15
CACNA1A-227ENST00000636549 SPART-AS1P0CW21 52 aa14.1□□□□□ -0.15
CACNA1A-227ENST00000636549 BLCAPP62952 87 aa14.1□□□□□ -0.15
CACNA1A-227ENST00000636549 Q6ZRM9 215 aa14.1□□□□□ -0.15
CACNA1A-227ENST00000636549 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.1□□□□□ -0.15
CACNA1A-227ENST00000636549 ACYP1P07311 99 aa14.1□□□□□ -0.15
CACNA1A-227ENST00000636549 ZNF503-AS2A6NEH8 195 aa14.09□□□□□ -0.15
CACNA1A-227ENST00000636549 C17orf58Q2M2W7 97 aa14.09□□□□□ -0.15
CACNA1A-227ENST00000636549 J3QLI3 93 aa14.09□□□□□ -0.15
CACNA1A-227ENST00000636549 DEFB1P60022 68 aa14.09□□□□□ -0.15
CACNA1A-227ENST00000636549 IGLV3-9A0A075B6K5 115 aa14.08□□□□□ -0.15
CACNA1A-227ENST00000636549 FAM231BA6NCW3 169 aa14.08□□□□□ -0.16
CACNA1A-227ENST00000636549 IGHG2P01859 326 aa14.08□□□□□ -0.16
CACNA1A-227ENST00000636549 SPTBN1Q01082 2364 aaKnown RBP14.08□□□□□ -0.16
CACNA1A-227ENST00000636549 ZC2HC1AQ96GY0 325 aa14.08□□□□□ -0.16
CACNA1A-227ENST00000636549 RALGAPA2Q2PPJ7 1873 aa14.08□□□□□ -0.16
CACNA1A-227ENST00000636549 HIST3H2BBQ8N257 126 aa14.07□□□□□ -0.16
CACNA1A-227ENST00000636549 IGKV3D-7A0A0C4DH55 119 aa14.07□□□□□ -0.16
CACNA1A-227ENST00000636549 FAM104BQ5XKR9 115 aa14.07□□□□□ -0.16
CACNA1A-227ENST00000636549 KLK12Q9UKR0 248 aa14.07□□□□□ -0.16
CACNA1A-227ENST00000636549 MRPL27Q9P0M9 148 aaKnown RBP14.07□□□□□ -0.16
CACNA1A-227ENST00000636549 HERVK_113P63121 156 aa14.07□□□□□ -0.16
CACNA1A-227ENST00000636549 Q6ZR03 302 aa14.07□□□□□ -0.16
CACNA1A-227ENST00000636549 RPL39LQ96EH5 51 aaKnown RBP14.06□□□□□ -0.16
CACNA1A-227ENST00000636549 GATA1P15976 413 aaPredicted RBP14.06□□□□□ -0.16
CACNA1A-227ENST00000636549 ATP6V0E2Q8NHE4 81 aa14.06□□□□□ -0.16
CACNA1A-227ENST00000636549 Q8N8P6 123 aa14.06□□□□□ -0.16
CACNA1A-227ENST00000636549 RITA1Q96K30 269 aa14.06□□□□□ -0.16
CACNA1A-227ENST00000636549 SEC61GP60059 68 aa14.05□□□□□ -0.16
CACNA1A-227ENST00000636549 NMSQ5H8A3 153 aa14.05□□□□□ -0.16
CACNA1A-227ENST00000636549 ORMDL1Q9P0S3 153 aa14.05□□□□□ -0.16
CACNA1A-227ENST00000636549 DYNAPQ8N1N2 210 aa14.05□□□□□ -0.16
CACNA1A-227ENST00000636549 TRAV13-2A0A0B4J235 113 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 122.2 ms