RNA–Protein interactions for RNA: ENST00000621181.4

CLK1-215, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best) BASIC

Gene CLK1, Length 1,843 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-215ENST00000621181 PVRIGQ6DKI7 326 aa5.69□□□□□ -1.5
CLK1-215ENST00000621181 Q6ZTC4 211 aa5.69□□□□□ -1.5
CLK1-215ENST00000621181 STHQ8IWL8 128 aa5.69□□□□□ -1.5
CLK1-215ENST00000621181 TMEM256Q8N2U0 113 aa5.69□□□□□ -1.5
CLK1-215ENST00000621181 Q8NAQ8 132 aa5.69□□□□□ -1.5
CLK1-215ENST00000621181 SSBP4Q9BWG4 385 aaPredicted RBP5.69□□□□□ -1.5
CLK1-215ENST00000621181 PRO1933Q9H354 126 aa5.69□□□□□ -1.5
CLK1-215ENST00000621181 TRAPPC1Q9Y5R8 145 aa5.69□□□□□ -1.5
CLK1-215ENST00000621181 V9GYV3 84 aa5.69□□□□□ -1.5
CLK1-215ENST00000621181 TRAV10A0A0B4J240 114 aa5.68□□□□□ -1.5
CLK1-215ENST00000621181 A0A1B0GVY2 172 aa5.68□□□□□ -1.5
CLK1-215ENST00000621181 GGTLC3B5MD39 225 aa5.68□□□□□ -1.5
CLK1-215ENST00000621181 DEFB131AP59861 70 aa5.68□□□□□ -1.5
CLK1-215ENST00000621181 MLANAQ16655 118 aa5.68□□□□□ -1.5
CLK1-215ENST00000621181 TCF24Q7RTU0 167 aa5.68□□□□□ -1.5
CLK1-215ENST00000621181 TMEM18Q96B42 140 aa5.68□□□□□ -1.5
CLK1-215ENST00000621181 MISP3Q96FF7 219 aa5.68□□□□□ -1.5
CLK1-215ENST00000621181 MS4A6AQ9H2W1 248 aa5.68□□□□□ -1.5
CLK1-215ENST00000621181 ENY2Q9NPA8 101 aa5.68□□□□□ -1.5
CLK1-215ENST00000621181 TMEM167BQ9NRX6 74 aa5.68□□□□□ -1.5
CLK1-215ENST00000621181 FKBP11Q9NYL4 201 aa5.68□□□□□ -1.5
CLK1-215ENST00000621181 AGRNO00468 2067 aa5.68□□□□□ -1.5
CLK1-215ENST00000621181 PKHD1P08F94 4074 aa5.68□□□□□ -1.5
CLK1-215ENST00000621181 IGHV4-28A0A0C4DH34 117 aa5.67□□□□□ -1.5
CLK1-215ENST00000621181 GNG7O60262 68 aa5.67□□□□□ -1.5
CLK1-215ENST00000621181 MT-CO2P00403 227 aa5.67□□□□□ -1.5
CLK1-215ENST00000621181 RBMY1A1P0DJD3 496 aaKnown RBP5.67□□□□□ -1.5
CLK1-215ENST00000621181 RBMY1CP0DJD4 496 aa5.67□□□□□ -1.5
CLK1-215ENST00000621181 MIFP14174 115 aa5.67□□□□□ -1.5
CLK1-215ENST00000621181 OR10J1P30954 320 aa5.67□□□□□ -1.5
CLK1-215ENST00000621181 MFAP4P55083 255 aa5.67□□□□□ -1.5
CLK1-215ENST00000621181 RBMY1FQ15415 496 aaKnown RBP5.67□□□□□ -1.5
CLK1-215ENST00000621181 PQLC2Q6ZP29 291 aa5.67□□□□□ -1.5
CLK1-215ENST00000621181 IGF2BP2-AS1Q96M15 143 aa5.67□□□□□ -1.5
CLK1-215ENST00000621181 UHRF2Q96PU4 802 aa5.67□□□□□ -1.5
CLK1-215ENST00000621181 RABAC1Q9UI14 185 aa5.67□□□□□ -1.5
CLK1-215ENST00000621181 RYR1P21817 5038 aa5.67□□□□□ -1.5
CLK1-215ENST00000621181 IGKV1D-37A0A075B6S9 117 aa5.67□□□□□ -1.5
CLK1-215ENST00000621181 TMEM238LA0A1B0GVL6 79 aa5.67□□□□□ -1.5
CLK1-215ENST00000621181 A0A1W2PRE2 83 aa5.67□□□□□ -1.5
CLK1-215ENST00000621181 TSTD3H0UI37 97 aa5.67□□□□□ -1.5
CLK1-215ENST00000621181 M0R2N4 97 aa5.67□□□□□ -1.5
CLK1-215ENST00000621181 SLC17A3O00476 420 aa5.67□□□□□ -1.5
CLK1-215ENST00000621181 IGHV3-48P01763 117 aa5.67□□□□□ -1.5
CLK1-215ENST00000621181 P0DMU3 169 aa5.67□□□□□ -1.5
CLK1-215ENST00000621181 FAM231AP0DMU4 169 aa5.67□□□□□ -1.5
CLK1-215ENST00000621181 FAM231CP0DMU5 169 aa5.67□□□□□ -1.5
CLK1-215ENST00000621181 GATA2P23769 480 aaPredicted RBP5.67□□□□□ -1.5
CLK1-215ENST00000621181 CENPWQ5EE01 88 aa5.67□□□□□ -1.5
CLK1-215ENST00000621181 POM121L12Q8N7R1 296 aa5.67□□□□□ -1.5
CLK1-215ENST00000621181 THAP8Q8NA92 274 aa5.67□□□□□ -1.5
CLK1-215ENST00000621181 ZNF414Q96IQ9 312 aa5.67□□□□□ -1.5
CLK1-215ENST00000621181 C2orf88Q9BSF0 95 aa5.67□□□□□ -1.5
CLK1-215ENST00000621181 NDUFAF3Q9BU61 184 aa5.67□□□□□ -1.5
CLK1-215ENST00000621181 OSTCQ9NRP0 149 aa5.67□□□□□ -1.5
CLK1-215ENST00000621181 DEFB131BA0A096LNP1 70 aa5.66□□□□□ -1.5
CLK1-215ENST00000621181 IGHV3-66A0A0C4DH42 116 aa5.66□□□□□ -1.5
CLK1-215ENST00000621181 CRYBB3P26998 211 aa5.66□□□□□ -1.5
CLK1-215ENST00000621181 Q0VG73 95 aa5.66□□□□□ -1.5
CLK1-215ENST00000621181 OR5I1Q13606 314 aa5.66□□□□□ -1.5
CLK1-215ENST00000621181 MORN5Q5VZ52 161 aa5.66□□□□□ -1.5
CLK1-215ENST00000621181 ZNF600Q6ZNG1 722 aa5.66□□□□□ -1.5
CLK1-215ENST00000621181 TXN2Q99757 166 aa5.66□□□□□ -1.5
CLK1-215ENST00000621181 SLC25A2Q9BXI2 301 aa5.66□□□□□ -1.5
CLK1-215ENST00000621181 MRPL32Q9BYC8 188 aaKnown RBP5.66□□□□□ -1.5
CLK1-215ENST00000621181 FNDC4Q9H6D8 234 aaPredicted RBP5.66□□□□□ -1.5
CLK1-215ENST00000621181 HELTA6NFD8 242 aa5.65□□□□□ -1.5
CLK1-215ENST00000621181 I3L2K1 104 aa5.65□□□□□ -1.5
CLK1-215ENST00000621181 ISLRO14498 428 aa5.65□□□□□ -1.5
CLK1-215ENST00000621181 RTL8CO15255 209 aa5.65□□□□□ -1.5
CLK1-215ENST00000621181 APOHP02749 345 aaPredicted RBP5.65□□□□□ -1.5
CLK1-215ENST00000621181 ZNF90Q03938 601 aa5.65□□□□□ -1.5
CLK1-215ENST00000621181 IQCJQ1A5X6 159 aa5.65□□□□□ -1.5
CLK1-215ENST00000621181 PATE2Q6UY27 113 aa5.65□□□□□ -1.5
CLK1-215ENST00000621181 GNB1LQ9BYB4 327 aa5.65□□□□□ -1.5
CLK1-215ENST00000621181 CLEC5AQ9NY25 188 aa5.65□□□□□ -1.5
CLK1-215ENST00000621181 MRPL36Q9P0J6 103 aaKnown RBP5.65□□□□□ -1.5
CLK1-215ENST00000621181 TRAV2A0A0B4J234 112 aa5.64□□□□□ -1.51
CLK1-215ENST00000621181 TRAV5A0A0B4J249 113 aa5.64□□□□□ -1.51
CLK1-215ENST00000621181 SMIM27A0A1W2PRY6 76 aa5.64□□□□□ -1.51
CLK1-215ENST00000621181 GIG44P09565 113 aaPredicted RBP5.64□□□□□ -1.51
CLK1-215ENST00000621181 GNG4P50150 75 aa5.64□□□□□ -1.51
CLK1-215ENST00000621181 TAS2R45P59539 299 aa5.64□□□□□ -1.51
CLK1-215ENST00000621181 LBHQ53QV2 105 aaPredicted RBP5.64□□□□□ -1.51
CLK1-215ENST00000621181 C1orf194Q5T5A4 169 aa5.64□□□□□ -1.51
CLK1-215ENST00000621181 MORN3Q6PF18 240 aaPredicted RBP5.64□□□□□ -1.51
CLK1-215ENST00000621181 TOMM20LQ6UXN7 152 aa5.64□□□□□ -1.51
CLK1-215ENST00000621181 TMEM136Q6ZRR5 245 aa5.64□□□□□ -1.51
CLK1-215ENST00000621181 TRPT1Q86TN4 253 aaKnown RBP5.64□□□□□ -1.51
CLK1-215ENST00000621181 STXBP6Q8NFX7 210 aa5.64□□□□□ -1.51
CLK1-215ENST00000621181 DNAJC4Q9NNZ3 241 aa5.64□□□□□ -1.51
CLK1-215ENST00000621181 A0A1B0GV90 55 aa5.64□□□□□ -1.51
CLK1-215ENST00000621181 GRIFINA4D1Z8 144 aa5.64□□□□□ -1.51
CLK1-215ENST00000621181 F2Z2F3 143 aa5.64□□□□□ -1.51
CLK1-215ENST00000621181 ZNF688P0C7X2 276 aa5.64□□□□□ -1.51
CLK1-215ENST00000621181 TAS2R60P59551 318 aa5.64□□□□□ -1.51
CLK1-215ENST00000621181 Q8N976 141 aa5.64□□□□□ -1.51
CLK1-215ENST00000621181 RNASE7Q9H1E1 156 aaKnown RBP5.64□□□□□ -1.51
CLK1-215ENST00000621181 NAGKQ9UJ70 344 aa5.64□□□□□ -1.51
CLK1-215ENST00000621181 CELA1Q9UNI1 258 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms