RNA–Protein interactions for RNA: ENST00000620996.4

VTA1-205, Transcript of vesicle trafficking 1, humanhuman

TSL 3 BASIC

Gene VTA1, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-205ENST00000620996 NPFFR1Q9GZQ6 430 aa7.64□□□□□ -1.19
VTA1-205ENST00000620996 TRAV8-6A0A0B4J262 113 aa7.63□□□□□ -1.19
VTA1-205ENST00000620996 IZUMO1RA6ND01 250 aa7.63□□□□□ -1.19
VTA1-205ENST00000620996 IGLV2-11P01706 119 aa7.63□□□□□ -1.19
VTA1-205ENST00000620996 PAFAH1B2P68402 229 aa7.63□□□□□ -1.19
VTA1-205ENST00000620996 NUP35Q8NFH5 326 aa7.63□□□□□ -1.19
VTA1-205ENST00000620996 VGLL1Q99990 258 aa7.63□□□□□ -1.19
VTA1-205ENST00000620996 FLNAP21333 2647 aaKnown RBP7.63□□□□□ -1.19
VTA1-205ENST00000620996 SMIM27A0A1W2PRY6 76 aa7.63□□□□□ -1.19
VTA1-205ENST00000620996 SRD5A1P18405 259 aa7.63□□□□□ -1.19
VTA1-205ENST00000620996 FAM231DQ6ZW35 169 aa7.63□□□□□ -1.19
VTA1-205ENST00000620996 A8MWL6 223 aa7.63□□□□□ -1.19
VTA1-205ENST00000620996 H3BUA1 57 aa7.63□□□□□ -1.19
VTA1-205ENST00000620996 TM4SF20Q53R12 229 aa7.63□□□□□ -1.19
VTA1-205ENST00000620996 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.63□□□□□ -1.19
VTA1-205ENST00000620996 TSKUQ8WUA8 353 aa7.63□□□□□ -1.19
VTA1-205ENST00000620996 MLST8Q9BVC4 326 aa7.63□□□□□ -1.19
VTA1-205ENST00000620996 YAE1D1Q9NRH1 226 aa7.63□□□□□ -1.19
VTA1-205ENST00000620996 MXRA5Q9NR99 2828 aa7.63□□□□□ -1.19
VTA1-205ENST00000620996 TRAV9-1A0A075B6T8 112 aa7.62□□□□□ -1.19
VTA1-205ENST00000620996 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.62□□□□□ -1.19
VTA1-205ENST00000620996 GAGE10A6NGK3 116 aa7.62□□□□□ -1.19
VTA1-205ENST00000620996 PRAC2D3DTV9 90 aa7.62□□□□□ -1.19
VTA1-205ENST00000620996 TAX1BP3O14907 124 aa7.62□□□□□ -1.19
VTA1-205ENST00000620996 ODF1Q14990 250 aa7.62□□□□□ -1.19
VTA1-205ENST00000620996 MBD6Q96DN6 1003 aa7.62□□□□□ -1.19
VTA1-205ENST00000620996 SSBP4Q9BWG4 385 aaPredicted RBP7.62□□□□□ -1.19
VTA1-205ENST00000620996 PEF1Q9UBV8 284 aaKnown RBP7.62□□□□□ -1.19
VTA1-205ENST00000620996 TP53TG3Q9ULZ0 132 aa7.62□□□□□ -1.19
VTA1-205ENST00000620996 HECTD1Q9ULT8 2610 aa7.62□□□□□ -1.19
VTA1-205ENST00000620996 J3KRW8 73 aa7.62□□□□□ -1.19
VTA1-205ENST00000620996 NDUFA4O00483 81 aa7.62□□□□□ -1.19
VTA1-205ENST00000620996 C8orf86Q6ZUL3 223 aa7.62□□□□□ -1.19
VTA1-205ENST00000620996 WFDC3Q8IUB2 231 aa7.62□□□□□ -1.19
VTA1-205ENST00000620996 SNAI2O43623 268 aa7.61□□□□□ -1.19
VTA1-205ENST00000620996 IGLV1-40P01703 118 aa7.61□□□□□ -1.19
VTA1-205ENST00000620996 HIST2H2BDQ6DRA6 164 aa7.61□□□□□ -1.19
VTA1-205ENST00000620996 KLHDC1Q8N7A1 406 aa7.61□□□□□ -1.19
VTA1-205ENST00000620996 NDFIP1Q9BT67 221 aa7.61□□□□□ -1.19
VTA1-205ENST00000620996 NOTCH2Q04721 2471 aa7.61□□□□□ -1.19
VTA1-205ENST00000620996 ESDP10768 282 aa7.61□□□□□ -1.19
VTA1-205ENST00000620996 CTRLP40313 264 aa7.61□□□□□ -1.19
VTA1-205ENST00000620996 LINC00310P59036 64 aa7.61□□□□□ -1.19
VTA1-205ENST00000620996 GCN1Q92616 2671 aaKnown RBP7.61□□□□□ -1.19
VTA1-205ENST00000620996 ACANP16112 2415 aa7.61□□□□□ -1.19
VTA1-205ENST00000620996 APCSP02743 223 aa7.61□□□□□ -1.19
VTA1-205ENST00000620996 EDN2P20800 178 aa7.61□□□□□ -1.19
VTA1-205ENST00000620996 HERV-K104P63124 156 aa7.61□□□□□ -1.19
VTA1-205ENST00000620996 KLK9Q2XQG4 91 aa7.61□□□□□ -1.19
VTA1-205ENST00000620996 FAM106AQ4KMX7 169 aa7.61□□□□□ -1.19
VTA1-205ENST00000620996 SLC50A1Q9BRV3 221 aa7.61□□□□□ -1.19
VTA1-205ENST00000620996 ZNF492Q9P255 531 aa7.61□□□□□ -1.19
VTA1-205ENST00000620996 KLK9Q9UKQ9 250 aa7.61□□□□□ -1.19
VTA1-205ENST00000620996 ITPR2Q14571 2701 aa7.61□□□□□ -1.19
VTA1-205ENST00000620996 G3V4G9 280 aa7.6□□□□□ -1.19
VTA1-205ENST00000620996 H0Y8G0 127 aa7.6□□□□□ -1.19
VTA1-205ENST00000620996 FSHBP01225 129 aa7.6□□□□□ -1.19
VTA1-205ENST00000620996 TMEM136Q6ZRR5 245 aa7.6□□□□□ -1.19
VTA1-205ENST00000620996 TIMM8BQ9Y5J9 83 aaPredicted RBP7.6□□□□□ -1.19
VTA1-205ENST00000620996 MYO9AB2RTY4 2548 aa7.6□□□□□ -1.19
VTA1-205ENST00000620996 C19orf71A6NCJ1 209 aa7.6□□□□□ -1.19
VTA1-205ENST00000620996 GTSF1Q8WW33 167 aa7.6□□□□□ -1.19
VTA1-205ENST00000620996 RHPN1-AS1Q9BWJ2 59 aa7.6□□□□□ -1.19
VTA1-205ENST00000620996 GNB1LQ9BYB4 327 aa7.6□□□□□ -1.19
VTA1-205ENST00000620996 ZNF702PQ9H963 129 aa7.6□□□□□ -1.19
VTA1-205ENST00000620996 A0A1W2PS18 150 aa7.6□□□□□ -1.19
VTA1-205ENST00000620996 FAM181BA6NEQ2 426 aa7.6□□□□□ -1.19
VTA1-205ENST00000620996 IGHG4P01861 327 aa7.6□□□□□ -1.19
VTA1-205ENST00000620996 C3orf79P0CE67 100 aa7.6□□□□□ -1.19
VTA1-205ENST00000620996 SRIP30626 198 aa7.6□□□□□ -1.19
VTA1-205ENST00000620996 TCTAP57738 103 aa7.6□□□□□ -1.19
VTA1-205ENST00000620996 CFHR3Q02985 330 aa7.6□□□□□ -1.19
VTA1-205ENST00000620996 GTF2H5Q6ZYL4 71 aa7.6□□□□□ -1.19
VTA1-205ENST00000620996 AP1S3Q96PC3 154 aa7.6□□□□□ -1.19
VTA1-205ENST00000620996 FASNP49327 2511 aaKnown RBP7.59□□□□□ -1.19
VTA1-205ENST00000620996 TMEM189A5PLL7 270 aa7.59□□□□□ -1.19
VTA1-205ENST00000620996 SH2D1AO60880 128 aa7.59□□□□□ -1.19
VTA1-205ENST00000620996 HLA-DQA1P01909 254 aa7.59□□□□□ -1.19
VTA1-205ENST00000620996 ORM1P02763 201 aa7.59□□□□□ -1.19
VTA1-205ENST00000620996 PSMB8P28062 276 aa7.59□□□□□ -1.19
VTA1-205ENST00000620996 DEFB1P60022 68 aa7.59□□□□□ -1.19
VTA1-205ENST00000620996 TMEM78Q5T7P6 136 aa7.59□□□□□ -1.19
VTA1-205ENST00000620996 TMEM190Q8WZ59 177 aa7.59□□□□□ -1.19
VTA1-205ENST00000620996 PRR25Q96S07 402 aa7.59□□□□□ -1.19
VTA1-205ENST00000620996 MT-ND6P03923 174 aa7.59□□□□□ -1.19
VTA1-205ENST00000620996 FAM162BQ5T6X4 162 aa7.59□□□□□ -1.19
VTA1-205ENST00000620996 C9orf139Q6ZV77 190 aa7.59□□□□□ -1.19
VTA1-205ENST00000620996 C11orf44Q8N8P7 122 aa7.59□□□□□ -1.19
VTA1-205ENST00000620996 RAB37Q96AX2 223 aa7.59□□□□□ -1.19
VTA1-205ENST00000620996 SIGMAR1Q99720 223 aa7.59□□□□□ -1.19
VTA1-205ENST00000620996 DAZ1Q9NQZ3 744 aaKnown RBP7.59□□□□□ -1.19
VTA1-205ENST00000620996 A0A087X0K7 114 aa7.58□□□□□ -1.2
VTA1-205ENST00000620996 A0A1B0GW15 77 aa7.58□□□□□ -1.2
VTA1-205ENST00000620996 ZNF253O75346 499 aa7.58□□□□□ -1.2
VTA1-205ENST00000620996 CRIP1P50238 77 aa7.58□□□□□ -1.2
VTA1-205ENST00000620996 SYNJ2BPP57105 145 aa7.58□□□□□ -1.2
VTA1-205ENST00000620996 DEFB136Q30KP8 78 aa7.58□□□□□ -1.2
VTA1-205ENST00000620996 RBPMS2Q6ZRY4 209 aaKnown RBP7.58□□□□□ -1.2
VTA1-205ENST00000620996 BOD1L2Q8IYS8 172 aa7.58□□□□□ -1.2
VTA1-205ENST00000620996 GLMPQ8WWB7 406 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 123.1 ms