RNA–Protein interactions for RNA: ENST00000618902.1

SHMT1-211, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 5 BASIC

Gene SHMT1, Length 378 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-211ENST00000618902 LINC00528Q8N1L1 170 aa3.97□□□□□ -1.77
SHMT1-211ENST00000618902 C5orf17Q8NAS9 161 aa3.97□□□□□ -1.77
SHMT1-211ENST00000618902 NHLRC2Q8NBF2 726 aa3.97□□□□□ -1.77
SHMT1-211ENST00000618902 DAZAP1Q96EP5 407 aaKnown RBP3.97□□□□□ -1.77
SHMT1-211ENST00000618902 KCNS1Q96KK3 526 aa3.97□□□□□ -1.77
SHMT1-211ENST00000618902 IGF2BP2-AS1Q96M15 143 aa3.97□□□□□ -1.77
SHMT1-211ENST00000618902 NDFIP1Q9BT67 221 aa3.97□□□□□ -1.77
SHMT1-211ENST00000618902 DERL1Q9BUN8 251 aa3.97□□□□□ -1.77
SHMT1-211ENST00000618902 VAMP8Q9BV40 100 aa3.97□□□□□ -1.77
SHMT1-211ENST00000618902 C21orf62Q9NYP8 219 aa3.97□□□□□ -1.77
SHMT1-211ENST00000618902 UQCR10Q9UDW1 63 aa3.97□□□□□ -1.77
SHMT1-211ENST00000618902 UFC1Q9Y3C8 167 aa3.97□□□□□ -1.77
SHMT1-211ENST00000618902 SELENOKQ9Y6D0 94 aa3.97□□□□□ -1.77
SHMT1-211ENST00000618902 IGKV1D-37A0A075B6S9 117 aa3.96□□□□□ -1.78
SHMT1-211ENST00000618902 IGKV1OR2-108A0A075B7D4 117 aa3.96□□□□□ -1.78
SHMT1-211ENST00000618902 IGHV3OR16-8A0A075B7F1 116 aa3.96□□□□□ -1.78
SHMT1-211ENST00000618902 TMEM213A2RRL7 107 aa3.96□□□□□ -1.78
SHMT1-211ENST00000618902 K7EIL1 84 aa3.96□□□□□ -1.78
SHMT1-211ENST00000618902 K7EN84 100 aa3.96□□□□□ -1.78
SHMT1-211ENST00000618902 NDUFA4O00483 81 aa3.96□□□□□ -1.78
SHMT1-211ENST00000618902 PEX7O00628 323 aa3.96□□□□□ -1.78
SHMT1-211ENST00000618902 TCAPO15273 167 aa3.96□□□□□ -1.78
SHMT1-211ENST00000618902 CRXO43186 299 aaPredicted RBP3.96□□□□□ -1.78
SHMT1-211ENST00000618902 ZNF324O75467 553 aaPredicted RBP3.96□□□□□ -1.78
SHMT1-211ENST00000618902 SERF1AO75920 110 aa3.96□□□□□ -1.78
SHMT1-211ENST00000618902 LINC00614P0C842 121 aa3.96□□□□□ -1.78
SHMT1-211ENST00000618902 GP9P14770 177 aa3.96□□□□□ -1.78
SHMT1-211ENST00000618902 ARL3P36405 182 aa3.96□□□□□ -1.78
SHMT1-211ENST00000618902 UBE2L3P68036 154 aaKnown RBP3.96□□□□□ -1.78
SHMT1-211ENST00000618902 OR5I1Q13606 314 aa3.96□□□□□ -1.78
SHMT1-211ENST00000618902 TM4SF20Q53R12 229 aa3.96□□□□□ -1.78
SHMT1-211ENST00000618902 DEFB121Q5J5C9 76 aa3.96□□□□□ -1.78
SHMT1-211ENST00000618902 COL5A1-AS1Q5SY13 56 aa3.96□□□□□ -1.78
SHMT1-211ENST00000618902 OR2D3Q8NGH3 330 aa3.96□□□□□ -1.78
SHMT1-211ENST00000618902 NPIPB3Q92617 1050 aa3.96□□□□□ -1.78
SHMT1-211ENST00000618902 ZNF503Q96F45 646 aa3.96□□□□□ -1.78
SHMT1-211ENST00000618902 FAM167A-AS1Q96KT0 104 aa3.96□□□□□ -1.78
SHMT1-211ENST00000618902 NEU1Q99519 415 aa3.96□□□□□ -1.78
SHMT1-211ENST00000618902 ATG101Q9BSB4 218 aa3.96□□□□□ -1.78
SHMT1-211ENST00000618902 MLST8Q9BVC4 326 aa3.96□□□□□ -1.78
SHMT1-211ENST00000618902 SLC25A2Q9BXI2 301 aa3.96□□□□□ -1.78
SHMT1-211ENST00000618902 PRO1933Q9H354 126 aa3.96□□□□□ -1.78
SHMT1-211ENST00000618902 ZMAT4Q9H898 229 aa3.96□□□□□ -1.78
SHMT1-211ENST00000618902 OTORQ9NRC9 128 aa3.96□□□□□ -1.78
SHMT1-211ENST00000618902 MRPS16Q9Y3D3 137 aaKnown RBP3.96□□□□□ -1.78
SHMT1-211ENST00000618902 WI2-2373I1.2A0A1W2PRP0 233 aa3.95□□□□□ -1.78
SHMT1-211ENST00000618902 A0A1W2PS18 150 aa3.95□□□□□ -1.78
SHMT1-211ENST00000618902 C2orf70A6NJV1 201 aa3.95□□□□□ -1.78
SHMT1-211ENST00000618902 DIRC3C9JPN6 131 aa3.95□□□□□ -1.78
SHMT1-211ENST00000618902 SLC17A3O00476 420 aa3.95□□□□□ -1.78
SHMT1-211ENST00000618902 ZNF207O43670 478 aaKnown RBP3.95□□□□□ -1.78
SHMT1-211ENST00000618902 HSBP1O75506 76 aa3.95□□□□□ -1.78
SHMT1-211ENST00000618902 LTAP01374 205 aa3.95□□□□□ -1.78
SHMT1-211ENST00000618902 IGLV2-8P01709 118 aa3.95□□□□□ -1.78
SHMT1-211ENST00000618902 IGLC1P0CG04 106 aa3.95□□□□□ -1.78
SHMT1-211ENST00000618902 MGST1P10620 155 aaKnown RBP3.95□□□□□ -1.78
SHMT1-211ENST00000618902 BTF3P20290 206 aaKnown RBP3.95□□□□□ -1.78
SHMT1-211ENST00000618902 CBLN1P23435 193 aa3.95□□□□□ -1.78
SHMT1-211ENST00000618902 AMTP48728 403 aa3.95□□□□□ -1.78
SHMT1-211ENST00000618902 MFAP4P55083 255 aa3.95□□□□□ -1.78
SHMT1-211ENST00000618902 PDE6HQ13956 83 aa3.95□□□□□ -1.78
SHMT1-211ENST00000618902 Q56UQ5 140 aa3.95□□□□□ -1.78
SHMT1-211ENST00000618902 ZNF705AQ6ZN79 300 aaPredicted RBP3.95□□□□□ -1.78
SHMT1-211ENST00000618902 Q6ZWC4 215 aa3.95□□□□□ -1.78
SHMT1-211ENST00000618902 LINC00305Q7Z4B0 112 aa3.95□□□□□ -1.78
SHMT1-211ENST00000618902 BPIFA4PQ86YQ2 179 aa3.95□□□□□ -1.78
SHMT1-211ENST00000618902 TMEM256Q8N2U0 113 aa3.95□□□□□ -1.78
SHMT1-211ENST00000618902 NUDT10Q8NFP7 164 aa3.95□□□□□ -1.78
SHMT1-211ENST00000618902 FXYD5Q96DB9 178 aa3.95□□□□□ -1.78
SHMT1-211ENST00000618902 NUDT11Q96G61 164 aa3.95□□□□□ -1.78
SHMT1-211ENST00000618902 PMCHL2Q9BQD1 86 aa3.95□□□□□ -1.78
SHMT1-211ENST00000618902 MS4A6AQ9H2W1 248 aa3.95□□□□□ -1.78
SHMT1-211ENST00000618902 NRN1Q9NPD7 142 aa3.95□□□□□ -1.78
SHMT1-211ENST00000618902 DAZ1Q9NQZ3 744 aaKnown RBP3.95□□□□□ -1.78
SHMT1-211ENST00000618902 TRAV9-2A0A087WT02 112 aa3.94□□□□□ -1.78
SHMT1-211ENST00000618902 IGHV3-49A0A0A0MS15 119 aa3.94□□□□□ -1.78
SHMT1-211ENST00000618902 TRAV2A0A0B4J234 112 aa3.94□□□□□ -1.78
SHMT1-211ENST00000618902 A0A1B0GV90 55 aa3.94□□□□□ -1.78
SHMT1-211ENST00000618902 PGPA6NDG6 321 aa3.94□□□□□ -1.78
SHMT1-211ENST00000618902 GGTLC3B5MD39 225 aa3.94□□□□□ -1.78
SHMT1-211ENST00000618902 NPIPB6E9PJ23 425 aa3.94□□□□□ -1.78
SHMT1-211ENST00000618902 P01737 135 aa3.94□□□□□ -1.78
SHMT1-211ENST00000618902 APOHP02749 345 aaPredicted RBP3.94□□□□□ -1.78
SHMT1-211ENST00000618902 SLC25A5P05141 298 aaKnown RBP3.94□□□□□ -1.78
SHMT1-211ENST00000618902 HBBP68871 147 aa3.94□□□□□ -1.78
SHMT1-211ENST00000618902 PSG9Q00887 426 aa3.94□□□□□ -1.78
SHMT1-211ENST00000618902 RIGQ13278 110 aa3.94□□□□□ -1.78
SHMT1-211ENST00000618902 ZNF124Q15973 351 aa3.94□□□□□ -1.78
SHMT1-211ENST00000618902 SAPCD1Q5SSQ6 148 aa3.94□□□□□ -1.78
SHMT1-211ENST00000618902 SAMD13Q5VXD3 122 aa3.94□□□□□ -1.78
SHMT1-211ENST00000618902 SPATA31B1PQ5VZV4 182 aa3.94□□□□□ -1.78
SHMT1-211ENST00000618902 PATE2Q6UY27 113 aa3.94□□□□□ -1.78
SHMT1-211ENST00000618902 RBPMS2Q6ZRY4 209 aaKnown RBP3.94□□□□□ -1.78
SHMT1-211ENST00000618902 COX8CQ7Z4L0 72 aa3.94□□□□□ -1.78
SHMT1-211ENST00000618902 SPATA12Q7Z6I5 190 aa3.94□□□□□ -1.78
SHMT1-211ENST00000618902 GATD1Q8NB37 220 aa3.94□□□□□ -1.78
SHMT1-211ENST00000618902 NUP35Q8NFH5 326 aa3.94□□□□□ -1.78
SHMT1-211ENST00000618902 IL17DQ8TAD2 202 aa3.94□□□□□ -1.78
SHMT1-211ENST00000618902 WWC2-AS2Q96NR7 200 aa3.94□□□□□ -1.78
SHMT1-211ENST00000618902 PRR25Q96S07 402 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 98.2 ms