RNA–Protein interactions for RNA: ENST00000618441.5

MATR3-227, Transcript of matrin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MATR3, Length 4,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-227ENST00000618441 C19orf71A6NCJ1 209 aa9.72□□□□□ -0.85
MATR3-227ENST00000618441 TAL2Q16559 108 aa9.72□□□□□ -0.85
MATR3-227ENST00000618441 LINC01559Q495D7 138 aa9.72□□□□□ -0.85
MATR3-227ENST00000618441 MORN3Q6PF18 240 aaPredicted RBP9.72□□□□□ -0.85
MATR3-227ENST00000618441 OR11H6Q8NGC7 330 aa9.72□□□□□ -0.85
MATR3-227ENST00000618441 OR4C13Q8NGP0 309 aa9.72□□□□□ -0.85
MATR3-227ENST00000618441 ANKRD11Q6UB99 2663 aaPredicted RBP9.71□□□□□ -0.85
MATR3-227ENST00000618441 ACACBO00763 2458 aa9.71□□□□□ -0.85
MATR3-227ENST00000618441 TRGV8A0A0C4DH27 118 aa9.71□□□□□ -0.85
MATR3-227ENST00000618441 NBR2O15453 112 aa9.71□□□□□ -0.85
MATR3-227ENST00000618441 RNASE2P10153 161 aaKnown RBP9.71□□□□□ -0.85
MATR3-227ENST00000618441 MEOX1P50221 254 aa9.71□□□□□ -0.85
MATR3-227ENST00000618441 FOXC1Q12948 553 aa9.71□□□□□ -0.85
MATR3-227ENST00000618441 ATP1A1-AS1Q5TC04 95 aa9.71□□□□□ -0.85
MATR3-227ENST00000618441 KLHL30-AS1Q8NEE0 82 aa9.71□□□□□ -0.85
MATR3-227ENST00000618441 C7orf69Q9H7B7 122 aa9.71□□□□□ -0.85
MATR3-227ENST00000618441 MRPL36Q9P0J6 103 aaKnown RBP9.71□□□□□ -0.85
MATR3-227ENST00000618441 PCOLCEQ15113 449 aa9.71□□□□□ -0.86
MATR3-227ENST00000618441 TMEM78Q5T7P6 136 aa9.71□□□□□ -0.86
MATR3-227ENST00000618441 S4R3C0 116 aa9.71□□□□□ -0.86
MATR3-227ENST00000618441 TLN1Q9Y490 2541 aaKnown RBP9.71□□□□□ -0.86
MATR3-227ENST00000618441 MPV17P39210 176 aa9.71□□□□□ -0.86
MATR3-227ENST00000618441 C17orf77Q96MU5 243 aa9.71□□□□□ -0.86
MATR3-227ENST00000618441 GFRA4Q9GZZ7 299 aa9.71□□□□□ -0.86
MATR3-227ENST00000618441 HHLA3Q9XRX5 114 aa9.71□□□□□ -0.86
MATR3-227ENST00000618441 IGHV3-72A0A0B4J1Y9 119 aa9.7□□□□□ -0.86
MATR3-227ENST00000618441 OOSP1A8MZH6 123 aa9.7□□□□□ -0.86
MATR3-227ENST00000618441 TNFRSF13BO14836 293 aaPredicted RBP9.7□□□□□ -0.86
MATR3-227ENST00000618441 SAA1P0DJI8 122 aaPredicted RBP9.7□□□□□ -0.86
MATR3-227ENST00000618441 HERVK_113P61574 105 aa9.7□□□□□ -0.86
MATR3-227ENST00000618441 C1orf229Q6ZS94 237 aaPredicted RBP9.7□□□□□ -0.86
MATR3-227ENST00000618441 TMEM75Q8N9X5 138 aa9.7□□□□□ -0.86
MATR3-227ENST00000618441 PRCDQ00LT1 54 aa9.7□□□□□ -0.86
MATR3-227ENST00000618441 WI2-2373I1.2A0A1W2PRP0 233 aa9.7□□□□□ -0.86
MATR3-227ENST00000618441 SRRM4A7MD48 611 aaKnown RBP9.7□□□□□ -0.86
MATR3-227ENST00000618441 ATP6V0E2Q8NHE4 81 aa9.7□□□□□ -0.86
MATR3-227ENST00000618441 MLST8Q9BVC4 326 aa9.7□□□□□ -0.86
MATR3-227ENST00000618441 SLC25A16P16260 332 aa9.69□□□□□ -0.86
MATR3-227ENST00000618441 DGAT2L7PQ6IED9 249 aa9.69□□□□□ -0.86
MATR3-227ENST00000618441 DOPEY2Q9Y3R5 2298 aa9.69□□□□□ -0.86
MATR3-227ENST00000618441 LYZL6O75951 148 aa9.69□□□□□ -0.86
MATR3-227ENST00000618441 SUB1P53999 127 aaKnown RBP eCLIP9.69□□□□□ -0.863e-8■■■□□ 18
MATR3-227ENST00000618441 ADORA2A-AS1P86434 159 aa9.69□□□□□ -0.86
MATR3-227ENST00000618441 TMEM14BQ9NUH8 114 aa9.69□□□□□ -0.86
MATR3-227ENST00000618441 C21orf62Q9NYP8 219 aa9.69□□□□□ -0.86
MATR3-227ENST00000618441 FOXA2Q9Y261 457 aaPredicted RBP9.69□□□□□ -0.86
MATR3-227ENST00000618441 ADAMTS20P59510 1910 aa9.69□□□□□ -0.86
MATR3-227ENST00000618441 IGLV3-32A0A0A0MS00 114 aa9.69□□□□□ -0.86
MATR3-227ENST00000618441 TEX49A0A1B0GTD5 131 aa9.69□□□□□ -0.86
MATR3-227ENST00000618441 EIF4EBP1Q13541 118 aaPredicted RBP9.69□□□□□ -0.86
MATR3-227ENST00000618441 Q8TAT8 98 aa9.69□□□□□ -0.86
MATR3-227ENST00000618441 DMXL2Q8TDJ6 3036 aa9.69□□□□□ -0.86
MATR3-227ENST00000618441 TRAV26-2A0A0B4J265 109 aa9.68□□□□□ -0.86
MATR3-227ENST00000618441 LY6G6EA0A0G2JKS1 128 aa9.68□□□□□ -0.86
MATR3-227ENST00000618441 CRIP2P52943 208 aaPredicted RBP9.68□□□□□ -0.86
MATR3-227ENST00000618441 MRPL53Q96EL3 112 aaKnown RBP9.68□□□□□ -0.86
MATR3-227ENST00000618441 U3KQA8 63 aa9.68□□□□□ -0.86
MATR3-227ENST00000618441 UPK2O00526 184 aa9.68□□□□□ -0.86
MATR3-227ENST00000618441 IGFL4Q6B9Z1 124 aa9.68□□□□□ -0.86
MATR3-227ENST00000618441 OR10J6PQ8NGY7 276 aa9.68□□□□□ -0.86
MATR3-227ENST00000618441 C17orf82Q86X59 251 aaPredicted RBP9.68□□□□□ -0.86
MATR3-227ENST00000618441 FAM57AQ8TBR7 257 aa9.68□□□□□ -0.86
MATR3-227ENST00000618441 HIGD1AQ9Y241 93 aa9.68□□□□□ -0.86
MATR3-227ENST00000618441 ZNF256Q9Y2P7 627 aaPredicted RBP9.68□□□□□ -0.86
MATR3-227ENST00000618441 A0A1W2PPI3 338 aa9.67□□□□□ -0.86
MATR3-227ENST00000618441 ZMAT4Q9H898 229 aa9.67□□□□□ -0.86
MATR3-227ENST00000618441 E7EUB6 86 aa9.67□□□□□ -0.86
MATR3-227ENST00000618441 J3KT08 172 aa9.67□□□□□ -0.86
MATR3-227ENST00000618441 KIR2DS2P43631 304 aa9.67□□□□□ -0.86
MATR3-227ENST00000618441 C6orf226Q5I0X4 101 aa9.67□□□□□ -0.86
MATR3-227ENST00000618441 SPINK14Q6IE38 97 aa9.67□□□□□ -0.86
MATR3-227ENST00000618441 FAM236AA0A1B0GUQ0 79 aa9.67□□□□□ -0.86
MATR3-227ENST00000618441 FAM236BA0A1B0GV22 79 aa9.67□□□□□ -0.86
MATR3-227ENST00000618441 CD7P09564 240 aa9.67□□□□□ -0.86
MATR3-227ENST00000618441 PMVKQ15126 192 aa9.67□□□□□ -0.86
MATR3-227ENST00000618441 GGNQ86UU5 652 aa9.67□□□□□ -0.86
MATR3-227ENST00000618441 SLC25A39Q9BZJ4 359 aaPredicted RBP9.67□□□□□ -0.86
MATR3-227ENST00000618441 ATMQ13315 3056 aa9.67□□□□□ -0.86
MATR3-227ENST00000618441 TCF15Q12870 199 aa9.66□□□□□ -0.86
MATR3-227ENST00000618441 PTPRQQ9UMZ3 2332 aa9.66□□□□□ -0.86
MATR3-227ENST00000618441 CRYGBP07316 175 aa9.66□□□□□ -0.86
MATR3-227ENST00000618441 PLEKHB2Q96CS7 222 aa9.66□□□□□ -0.86
MATR3-227ENST00000618441 PRADC1Q9BSG0 188 aa9.66□□□□□ -0.86
MATR3-227ENST00000618441 IGHV3OR16-8A0A075B7F1 116 aa9.66□□□□□ -0.86
MATR3-227ENST00000618441 H3BS24 57 aa9.66□□□□□ -0.86
MATR3-227ENST00000618441 CD177Q8N6Q3 437 aa9.66□□□□□ -0.86
MATR3-227ENST00000618441 Q8N1Y9 231 aa9.66□□□□□ -0.86
MATR3-227ENST00000618441 PRB3Q04118 309 aaPredicted RBP9.65□□□□□ -0.86
MATR3-227ENST00000618441 ZNF714Q96N38 554 aa9.65□□□□□ -0.86
MATR3-227ENST00000618441 IGHV3-64A0A075B6Q5 118 aa9.65□□□□□ -0.86
MATR3-227ENST00000618441 IGKV2-40A0A087WW87 121 aaPredicted RBP9.65□□□□□ -0.86
MATR3-227ENST00000618441 IGKV2D-40P01614 121 aaPredicted RBP9.65□□□□□ -0.86
MATR3-227ENST00000618441 CNEP1R1Q8N9A8 125 aa9.65□□□□□ -0.86
MATR3-227ENST00000618441 SCGB3A1Q96QR1 104 aa9.65□□□□□ -0.86
MATR3-227ENST00000618441 TRGV9Q99603 122 aa9.65□□□□□ -0.86
MATR3-227ENST00000618441 ZFHX4Q86UP3 3567 aa9.65□□□□□ -0.87
MATR3-227ENST00000618441 SRD5A1P18405 259 aa9.65□□□□□ -0.87
MATR3-227ENST00000618441 CEP192Q8TEP8 1941 aa9.64□□□□□ -0.87
MATR3-227ENST00000618441 SH2D1AO60880 128 aa9.64□□□□□ -0.87
MATR3-227ENST00000618441 KRTAP27-1Q3LI81 207 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 186 ms