RNA–Protein interactions for RNA: ENST00000617198.4

DDX1-207, Transcript of DEAD-box helicase 1, humanhuman

TSL 1 (best) BASIC

Gene DDX1, Length 2,257 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1-207ENST00000617198 SIRPDQ9H106 197 aa13.46□□□□□ -0.26
DDX1-207ENST00000617198 SAP30O75446 220 aa13.45□□□□□ -0.26
DDX1-207ENST00000617198 FOXC1Q12948 553 aa13.45□□□□□ -0.26
DDX1-207ENST00000617198 DPM2O94777 84 aa13.44□□□□□ -0.26
DDX1-207ENST00000617198 TRGV3P03979 118 aa13.44□□□□□ -0.26
DDX1-207ENST00000617198 TM4SF20Q53R12 229 aa13.44□□□□□ -0.26
DDX1-207ENST00000617198 TMEM78Q5T7P6 136 aa13.44□□□□□ -0.26
DDX1-207ENST00000617198 CLEC19AQ6UXS0 136 aa13.44□□□□□ -0.26
DDX1-207ENST00000617198 CCDC140Q96MF4 163 aa13.44□□□□□ -0.26
DDX1-207ENST00000617198 MEGF9Q9H1U4 602 aa13.44□□□□□ -0.26
DDX1-207ENST00000617198 SMIM13P0DJ93 91 aa13.44□□□□□ -0.26
DDX1-207ENST00000617198 NBL1P41271 181 aa13.44□□□□□ -0.26
DDX1-207ENST00000617198 ADORA2A-AS1P86434 159 aa13.44□□□□□ -0.26
DDX1-207ENST00000617198 OR5A1Q8NGJ0 315 aa13.44□□□□□ -0.26
DDX1-207ENST00000617198 TTTY13Q9BZ97 58 aa13.44□□□□□ -0.26
DDX1-207ENST00000617198 SPCS1Q9Y6A9 102 aa13.44□□□□□ -0.26
DDX1-207ENST00000617198 IGHV3OR16-13A0A075B7E8 117 aa13.43□□□□□ -0.26
DDX1-207ENST00000617198 IGHV3-74A0A0B4J1X5 117 aa13.43□□□□□ -0.26
DDX1-207ENST00000617198 SMIM17P0DL12 118 aa13.43□□□□□ -0.26
DDX1-207ENST00000617198 GCSHP23434 173 aa13.43□□□□□ -0.26
DDX1-207ENST00000617198 MRPL53Q96EL3 112 aaKnown RBP13.43□□□□□ -0.26
DDX1-207ENST00000617198 CHAC1Q9BUX1 264 aa13.43□□□□□ -0.26
DDX1-207ENST00000617198 SELENOKQ9Y6D0 94 aa13.43□□□□□ -0.26
DDX1-207ENST00000617198 TRAV8-2A0A0B4J237 113 aa13.43□□□□□ -0.26
DDX1-207ENST00000617198 IGHV7-4-1A0A0J9YVY3 117 aa13.43□□□□□ -0.26
DDX1-207ENST00000617198 PRSS47A8MTI9 375 aa13.43□□□□□ -0.26
DDX1-207ENST00000617198 GTSCR1Q86UQ5 136 aa13.43□□□□□ -0.26
DDX1-207ENST00000617198 TMEM8BA6NDV4 472 aa13.42□□□□□ -0.26
DDX1-207ENST00000617198 FXYD2P54710 66 aa13.42□□□□□ -0.26
DDX1-207ENST00000617198 ZC2HC1BQ5TFG8 222 aa13.42□□□□□ -0.26
DDX1-207ENST00000617198 NRACQ8N912 160 aa13.42□□□□□ -0.26
DDX1-207ENST00000617198 EEF1AKMT3Q96AZ1 226 aa13.42□□□□□ -0.26
DDX1-207ENST00000617198 METTL26Q96S19 204 aa13.42□□□□□ -0.26
DDX1-207ENST00000617198 HIF1ANQ9NWT6 349 aa13.42□□□□□ -0.26
DDX1-207ENST00000617198 FABP2P12104 132 aa13.42□□□□□ -0.26
DDX1-207ENST00000617198 UBE2E1P51965 193 aa13.42□□□□□ -0.26
DDX1-207ENST00000617198 C8orf86Q6ZUL3 223 aa13.42□□□□□ -0.26
DDX1-207ENST00000617198 AJUBAQ96IF1 538 aa13.42□□□□□ -0.26
DDX1-207ENST00000617198 CSTL1Q9H114 145 aa13.42□□□□□ -0.26
DDX1-207ENST00000617198 TLN1Q9Y490 2541 aaKnown RBP13.41□□□□□ -0.26
DDX1-207ENST00000617198 TRBV25-1A0A075B6N4 114 aa13.41□□□□□ -0.26
DDX1-207ENST00000617198 LAGE3Q14657 143 aa13.41□□□□□ -0.26
DDX1-207ENST00000617198 SAMD5Q5TGI4 173 aa13.41□□□□□ -0.26
DDX1-207ENST00000617198 MYOZ3Q8TDC0 251 aa13.41□□□□□ -0.26
DDX1-207ENST00000617198 UFC1Q9Y3C8 167 aa13.41□□□□□ -0.26
DDX1-207ENST00000617198 IGHV3-49A0A0A0MS15 119 aa13.41□□□□□ -0.26
DDX1-207ENST00000617198 G3V318 75 aa13.41□□□□□ -0.26
DDX1-207ENST00000617198 HLA-DRB4P13762 266 aa13.41□□□□□ -0.26
DDX1-207ENST00000617198 C9orf47Q6ZRZ4 202 aa13.41□□□□□ -0.26
DDX1-207ENST00000617198 NEGR1Q7Z3B1 354 aa13.41□□□□□ -0.26
DDX1-207ENST00000617198 HLA-DRB4X5D2U9 266 aa13.41□□□□□ -0.26
DDX1-207ENST00000617198 TRBV7-1A0A0A6YYK4 115 aa13.4□□□□□ -0.26
DDX1-207ENST00000617198 TRAV26-2A0A0B4J265 109 aa13.4□□□□□ -0.26
DDX1-207ENST00000617198 TMEM160Q9NX00 188 aa13.4□□□□□ -0.26
DDX1-207ENST00000617198 IGHV4-4A0A075B6R2 117 aa13.39□□□□□ -0.27
DDX1-207ENST00000617198 TRAV40A0A0B4J280 105 aa13.39□□□□□ -0.27
DDX1-207ENST00000617198 G3V4G9 280 aa13.39□□□□□ -0.27
DDX1-207ENST00000617198 ZNF207O43670 478 aaKnown RBP13.39□□□□□ -0.27
DDX1-207ENST00000617198 SAA4P35542 130 aa13.39□□□□□ -0.27
DDX1-207ENST00000617198 MRPL35Q9NZE8 188 aaKnown RBP13.39□□□□□ -0.27
DDX1-207ENST00000617198 WNK2Q9Y3S1 2297 aa13.39□□□□□ -0.27
DDX1-207ENST00000617198 LINC01548A6NM66 108 aa13.39□□□□□ -0.27
DDX1-207ENST00000617198 SPANXN1Q5VSR9 72 aa13.39□□□□□ -0.27
DDX1-207ENST00000617198 U3KQE9 123 aa13.38□□□□□ -0.27
DDX1-207ENST00000617198 TM2D2Q9BX73 214 aa13.38□□□□□ -0.27
DDX1-207ENST00000617198 SPTBN2O15020 2390 aa13.37□□□□□ -0.27
DDX1-207ENST00000617198 SRSF1Q07955 248 aaKnown RBP eCLIP13.37□□□□□ -0.27
DDX1-207ENST00000617198 Q6ZQT7 251 aa13.37□□□□□ -0.27
DDX1-207ENST00000617198 CEND1Q8N111 149 aa13.37□□□□□ -0.27
DDX1-207ENST00000617198 HRNRQ86YZ3 2850 aaPredicted RBP13.37□□□□□ -0.27
DDX1-207ENST00000617198 A0A087WX48 190 aa13.37□□□□□ -0.27
DDX1-207ENST00000617198 CENPVL3A0A0U1RRI6 287 aa13.37□□□□□ -0.27
DDX1-207ENST00000617198 K7ERJ3 54 aa13.36□□□□□ -0.27
DDX1-207ENST00000617198 PHLDA1Q8WV24 401 aaPredicted RBP13.36□□□□□ -0.27
DDX1-207ENST00000617198 C16orf92Q96LL3 132 aa13.36□□□□□ -0.27
DDX1-207ENST00000617198 PTPRQQ9UMZ3 2332 aa13.36□□□□□ -0.27
DDX1-207ENST00000617198 MRAP2Q96G30 205 aa13.36□□□□□ -0.27
DDX1-207ENST00000617198 RELNP78509 3460 aa13.35□□□□□ -0.27
DDX1-207ENST00000617198 H3BVH4 76 aa13.35□□□□□ -0.27
DDX1-207ENST00000617198 RIPPLY3P57055 190 aa13.35□□□□□ -0.27
DDX1-207ENST00000617198 ATP5G2Q06055 141 aa13.35□□□□□ -0.27
DDX1-207ENST00000617198 NHP2Q9NX24 153 aaKnown RBP13.35□□□□□ -0.27
DDX1-207ENST00000617198 PLNP26678 52 aa13.34□□□□□ -0.27
DDX1-207ENST00000617198 EFNA4P52798 201 aa13.34□□□□□ -0.27
DDX1-207ENST00000617198 MAPKAPK5-AS1Q8N8E1 139 aa13.34□□□□□ -0.27
DDX1-207ENST00000617198 LENEPQ9Y5L5 61 aa13.34□□□□□ -0.27
DDX1-207ENST00000617198 PRR9Q5T870 116 aa13.34□□□□□ -0.27
DDX1-207ENST00000617198 C5orf56Q8N8D9 126 aa13.34□□□□□ -0.27
DDX1-207ENST00000617198 SMIM2Q9BVW6 85 aa13.34□□□□□ -0.27
DDX1-207ENST00000617198 A0A1W2PPR1 153 aa13.33□□□□□ -0.28
DDX1-207ENST00000617198 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.33□□□□□ -0.28
DDX1-207ENST00000617198 C9orf139Q6ZV77 190 aa13.33□□□□□ -0.28
DDX1-207ENST00000617198 KLRB1Q12918 225 aa13.33□□□□□ -0.28
DDX1-207ENST00000617198 TAL2Q16559 108 aa13.33□□□□□ -0.28
DDX1-207ENST00000617198 GLMPQ8WWB7 406 aa13.33□□□□□ -0.28
DDX1-207ENST00000617198 NPFFO15130 113 aa13.32□□□□□ -0.28
DDX1-207ENST00000617198 ATP6V0BQ99437 205 aa13.32□□□□□ -0.28
DDX1-207ENST00000617198 TRAV12-1A0A0B4J245 112 aa13.32□□□□□ -0.28
DDX1-207ENST00000617198 ITLN2Q8WWU7 325 aaPredicted RBP13.32□□□□□ -0.28
DDX1-207ENST00000617198 C20orf173Q96LM9 149 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms