RNA–Protein interactions for RNA: ENST00000617103.4

CLTCL1-209, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,859 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-209ENST00000617103 TRACP01848 142 aa8.49□□□□□ -1.05
CLTCL1-209ENST00000617103 PIP4P2Q8N4L2 257 aa8.49□□□□□ -1.05
CLTCL1-209ENST00000617103 RNF166Q96A37 237 aaPredicted RBP8.49□□□□□ -1.05
CLTCL1-209ENST00000617103 PROK2Q9HC23 129 aa8.49□□□□□ -1.05
CLTCL1-209ENST00000617103 MED13LQ71F56 2210 aa8.49□□□□□ -1.05
CLTCL1-209ENST00000617103 C8orf86Q6ZUL3 223 aa8.49□□□□□ -1.05
CLTCL1-209ENST00000617103 ANKRD29Q8N6D5 301 aa8.49□□□□□ -1.05
CLTCL1-209ENST00000617103 TRBV25-1A0A075B6N4 114 aa8.49□□□□□ -1.05
CLTCL1-209ENST00000617103 A0A0G2JNJ9 132 aa8.49□□□□□ -1.05
CLTCL1-209ENST00000617103 LINC01545Q5VT33 79 aa8.49□□□□□ -1.05
CLTCL1-209ENST00000617103 SPANXCQ9NY87 97 aa8.49□□□□□ -1.05
CLTCL1-209ENST00000617103 Q9UFV3 132 aa8.49□□□□□ -1.05
CLTCL1-209ENST00000617103 LTBP1Q14766 1721 aa8.48□□□□□ -1.05
CLTCL1-209ENST00000617103 BRD3OSQ6XYD6 125 aa8.48□□□□□ -1.05
CLTCL1-209ENST00000617103 SH2D6Q7Z4S9 175 aa8.48□□□□□ -1.05
CLTCL1-209ENST00000617103 ABCA4P78363 2273 aa8.48□□□□□ -1.05
CLTCL1-209ENST00000617103 INS-IGF2F8WCM5 200 aa8.48□□□□□ -1.05
CLTCL1-209ENST00000617103 CFC1BP0CG36 223 aa8.48□□□□□ -1.05
CLTCL1-209ENST00000617103 CFC1P0CG37 223 aa8.48□□□□□ -1.05
CLTCL1-209ENST00000617103 ANXA2RQ3ZCQ2 193 aa8.48□□□□□ -1.05
CLTCL1-209ENST00000617103 PCNX1Q96RV3 2341 aa8.48□□□□□ -1.05
CLTCL1-209ENST00000617103 IGLL5B9A064 214 aa8.48□□□□□ -1.05
CLTCL1-209ENST00000617103 SAA4P35542 130 aa8.48□□□□□ -1.05
CLTCL1-209ENST00000617103 SS18Q15532 418 aa8.48□□□□□ -1.05
CLTCL1-209ENST00000617103 ZNF503-AS2A6NEH8 195 aa8.48□□□□□ -1.05
CLTCL1-209ENST00000617103 ATP6V0E1O15342 81 aa8.48□□□□□ -1.05
CLTCL1-209ENST00000617103 THADAQ6YHU6 1953 aa8.47□□□□□ -1.05
CLTCL1-209ENST00000617103 KNCNA6PVL3 124 aa8.47□□□□□ -1.05
CLTCL1-209ENST00000617103 TPSG1Q9NRR2 321 aa8.47□□□□□ -1.05
CLTCL1-209ENST00000617103 PRSS29PA6NIE9 313 aa8.47□□□□□ -1.05
CLTCL1-209ENST00000617103 K7EMI3 77 aa8.47□□□□□ -1.05
CLTCL1-209ENST00000617103 IGHG4P01861 327 aa8.47□□□□□ -1.05
CLTCL1-209ENST00000617103 ANKRD39Q53RE8 183 aa8.47□□□□□ -1.05
CLTCL1-209ENST00000617103 LYPD6Q86Y78 171 aa8.47□□□□□ -1.05
CLTCL1-209ENST00000617103 SCRT2Q9NQ03 307 aa8.47□□□□□ -1.05
CLTCL1-209ENST00000617103 CHD3Q12873 2000 aaKnown RBP8.47□□□□□ -1.05
CLTCL1-209ENST00000617103 FOXI2Q6ZQN5 318 aa8.47□□□□□ -1.05
CLTCL1-209ENST00000617103 SHISA9B4DS77 424 aa8.47□□□□□ -1.05
CLTCL1-209ENST00000617103 SSC4DQ8WTU2 575 aa8.47□□□□□ -1.05
CLTCL1-209ENST00000617103 LOXP28300 417 aaPredicted RBP8.46□□□□□ -1.05
CLTCL1-209ENST00000617103 DUX4L9Q6RFH8 374 aaPredicted RBP8.46□□□□□ -1.05
CLTCL1-209ENST00000617103 C11orf44Q8N8P7 122 aa8.46□□□□□ -1.05
CLTCL1-209ENST00000617103 UBE2E2Q96LR5 201 aa8.46□□□□□ -1.05
CLTCL1-209ENST00000617103 MSRB2Q9Y3D2 182 aa8.46□□□□□ -1.05
CLTCL1-209ENST00000617103 ZSWIM8A7E2V4 1837 aa8.46□□□□□ -1.05
CLTCL1-209ENST00000617103 IGHV1OR15-1A0A075B7D0 117 aa8.46□□□□□ -1.06
CLTCL1-209ENST00000617103 DEFB131AP59861 70 aa8.46□□□□□ -1.06
CLTCL1-209ENST00000617103 ZNF491Q8N8L2 437 aa8.46□□□□□ -1.06
CLTCL1-209ENST00000617103 E7EQL1 145 aa8.46□□□□□ -1.06
CLTCL1-209ENST00000617103 TAX1BP3O14907 124 aa8.46□□□□□ -1.06
CLTCL1-209ENST00000617103 SPINK13Q1W4C9 94 aa8.46□□□□□ -1.06
CLTCL1-209ENST00000617103 ZNF493Q6ZR52 646 aa8.46□□□□□ -1.06
CLTCL1-209ENST00000617103 LINC00173Q6ZV60 143 aa8.46□□□□□ -1.06
CLTCL1-209ENST00000617103 SS18L2Q9UHA2 77 aa8.46□□□□□ -1.06
CLTCL1-209ENST00000617103 MALRD1Q5VYJ5 2156 aa8.46□□□□□ -1.06
CLTCL1-209ENST00000617103 B4DSR2 109 aa8.45□□□□□ -1.06
CLTCL1-209ENST00000617103 TEX36Q5VZQ5 186 aa8.45□□□□□ -1.06
CLTCL1-209ENST00000617103 Q6ZS92 163 aa8.45□□□□□ -1.06
CLTCL1-209ENST00000617103 TSC2P49815 1807 aa8.45□□□□□ -1.06
CLTCL1-209ENST00000617103 LY6HO94772 140 aa8.45□□□□□ -1.06
CLTCL1-209ENST00000617103 CRYBA4P53673 196 aa8.45□□□□□ -1.06
CLTCL1-209ENST00000617103 EGR2P11161 476 aaPredicted RBP8.45□□□□□ -1.06
CLTCL1-209ENST00000617103 SYNJ2BPP57105 145 aa8.45□□□□□ -1.06
CLTCL1-209ENST00000617103 DSCR9P59020 149 aa8.45□□□□□ -1.06
CLTCL1-209ENST00000617103 HAMPP81172 84 aa8.45□□□□□ -1.06
CLTCL1-209ENST00000617103 ATRXP46100 2492 aa8.45□□□□□ -1.06
CLTCL1-209ENST00000617103 PLXNA4Q9HCM2 1894 aa8.45□□□□□ -1.06
CLTCL1-209ENST00000617103 PFN2P35080 140 aa8.45□□□□□ -1.06
CLTCL1-209ENST00000617103 UBE2E1P51965 193 aa8.45□□□□□ -1.06
CLTCL1-209ENST00000617103 TRAV13-2A0A0B4J235 113 aa8.44□□□□□ -1.06
CLTCL1-209ENST00000617103 SRSF2Q01130 221 aaKnown RBP8.44□□□□□ -1.06
CLTCL1-209ENST00000617103 TMEM126AQ9H061 195 aa8.44□□□□□ -1.06
CLTCL1-209ENST00000617103 F8WEM9 126 aa8.44□□□□□ -1.06
CLTCL1-209ENST00000617103 G3V318 75 aa8.44□□□□□ -1.06
CLTCL1-209ENST00000617103 C17orf77Q96MU5 243 aa8.44□□□□□ -1.06
CLTCL1-209ENST00000617103 KLK9Q9UKQ9 250 aa8.44□□□□□ -1.06
CLTCL1-209ENST00000617103 WDR90Q96KV7 1748 aa8.44□□□□□ -1.06
CLTCL1-209ENST00000617103 NDUFA4O00483 81 aa8.43□□□□□ -1.06
CLTCL1-209ENST00000617103 IGLV3-9A0A075B6K5 115 aa8.43□□□□□ -1.06
CLTCL1-209ENST00000617103 IGLV1-44P01699 117 aa8.43□□□□□ -1.06
CLTCL1-209ENST00000617103 ACYP1P07311 99 aa8.43□□□□□ -1.06
CLTCL1-209ENST00000617103 WFDC2Q14508 124 aa8.43□□□□□ -1.06
CLTCL1-209ENST00000617103 HIGD1BQ9P298 99 aa8.43□□□□□ -1.06
CLTCL1-209ENST00000617103 TEN1Q86WV5 123 aa8.43□□□□□ -1.06
CLTCL1-209ENST00000617103 Q6ZSR3 168 aa8.42□□□□□ -1.06
CLTCL1-209ENST00000617103 SMIM20Q8N5G0 67 aa8.42□□□□□ -1.06
CLTCL1-209ENST00000617103 IGHV1-69DA0A0B4J2H0 117 aa8.42□□□□□ -1.06
CLTCL1-209ENST00000617103 DIAPH2-AS1Q14236 149 aa8.42□□□□□ -1.06
CLTCL1-209ENST00000617103 RPL35AP18077 110 aaKnown RBP8.42□□□□□ -1.06
CLTCL1-209ENST00000617103 FXYD2P54710 66 aa8.42□□□□□ -1.06
CLTCL1-209ENST00000617103 IGF2BP2-AS1Q96M15 143 aa8.42□□□□□ -1.06
CLTCL1-209ENST00000617103 RLFQ13129 1914 aa8.42□□□□□ -1.06
CLTCL1-209ENST00000617103 IGHV3-16A0A0C4DH30 117 aa8.42□□□□□ -1.06
CLTCL1-209ENST00000617103 HERVK_113P63121 156 aa8.42□□□□□ -1.06
CLTCL1-209ENST00000617103 BPESC1Q9GZL8 116 aa8.42□□□□□ -1.06
CLTCL1-209ENST00000617103 AGPAT4-IT1Q9H0P7 198 aa8.42□□□□□ -1.06
CLTCL1-209ENST00000617103 RHOHQ15669 191 aa8.41□□□□□ -1.06
CLTCL1-209ENST00000617103 LENEPQ9Y5L5 61 aa8.41□□□□□ -1.06
CLTCL1-209ENST00000617103 HELZP42694 1942 aaKnown RBP8.41□□□□□ -1.06
CLTCL1-209ENST00000617103 DYNAPQ8N1N2 210 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms