RNA–Protein interactions for RNA: ENST00000585121.5

SS18-225, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-225ENST00000585121 OR2G3Q8NGZ4 309 aa8.72□□□□□ -1.01
SS18-225ENST00000585121 RXFP4Q8TDU9 374 aa8.72□□□□□ -1.01
SS18-225ENST00000585121 Q9H3A6 140 aa8.72□□□□□ -1.01
SS18-225ENST00000585121 GAGE12BA1L429 117 aa8.71□□□□□ -1.01
SS18-225ENST00000585121 RBAKDNA6NC62 111 aa8.71□□□□□ -1.01
SS18-225ENST00000585121 M0R2N4 97 aa8.71□□□□□ -1.01
SS18-225ENST00000585121 GAGE7O76087 117 aa8.71□□□□□ -1.01
SS18-225ENST00000585121 GAGE12FP0CL80 117 aa8.71□□□□□ -1.01
SS18-225ENST00000585121 GAGE12GP0CL81 117 aa8.71□□□□□ -1.01
SS18-225ENST00000585121 GAGE12IP0CL82 117 aa8.71□□□□□ -1.01
SS18-225ENST00000585121 CRISP2P16562 243 aa8.71□□□□□ -1.01
SS18-225ENST00000585121 ZNF138P52744 262 aa8.71□□□□□ -1.01
SS18-225ENST00000585121 DAZ2Q13117 558 aaKnown RBP8.71□□□□□ -1.01
SS18-225ENST00000585121 BTN1A1Q13410 526 aa8.71□□□□□ -1.01
SS18-225ENST00000585121 OR5I1Q13606 314 aa8.71□□□□□ -1.01
SS18-225ENST00000585121 LGALS9BQ3B8N2 356 aa8.71□□□□□ -1.01
SS18-225ENST00000585121 FAM74A1Q5RGS3 127 aa8.71□□□□□ -1.01
SS18-225ENST00000585121 FAM19A4Q96LR4 140 aa8.71□□□□□ -1.01
SS18-225ENST00000585121 VGLL1Q99990 258 aa8.71□□□□□ -1.01
SS18-225ENST00000585121 LINC00467Q9BRT7 94 aa8.71□□□□□ -1.01
SS18-225ENST00000585121 ZNF492Q9P255 531 aa8.71□□□□□ -1.01
SS18-225ENST00000585121 TRBV7-9A0A0J9YWB2 115 aa8.7□□□□□ -1.02
SS18-225ENST00000585121 ZNF324O75467 553 aaPredicted RBP8.7□□□□□ -1.02
SS18-225ENST00000585121 ANXA2RQ3ZCQ2 193 aa8.7□□□□□ -1.02
SS18-225ENST00000585121 DPPA3Q6W0C5 159 aa8.7□□□□□ -1.02
SS18-225ENST00000585121 PQLC2Q6ZP29 291 aa8.7□□□□□ -1.02
SS18-225ENST00000585121 CMTM2Q8TAZ6 248 aa8.7□□□□□ -1.02
SS18-225ENST00000585121 SH3BGRL3Q9H299 93 aa8.7□□□□□ -1.02
SS18-225ENST00000585121 IGLV2-18A0A075B6J9 118 aa8.7□□□□□ -1.02
SS18-225ENST00000585121 MBP02144 154 aa8.7□□□□□ -1.02
SS18-225ENST00000585121 CCL18P55774 89 aa8.7□□□□□ -1.02
SS18-225ENST00000585121 LINC00612Q8N6U2 182 aa8.7□□□□□ -1.02
SS18-225ENST00000585121 OR10G4Q8NGN3 311 aa8.7□□□□□ -1.02
SS18-225ENST00000585121 OR10G9Q8NGN4 311 aa8.7□□□□□ -1.02
SS18-225ENST00000585121 OR10G7Q8NGN6 311 aa8.7□□□□□ -1.02
SS18-225ENST00000585121 ZNF503Q96F45 646 aa8.7□□□□□ -1.02
SS18-225ENST00000585121 OTORQ9NRC9 128 aa8.7□□□□□ -1.02
SS18-225ENST00000585121 GSN-AS1Q9NRJ2 163 aa8.7□□□□□ -1.02
SS18-225ENST00000585121 HECTD4Q9Y4D8 3996 aa8.69□□□□□ -1.02
SS18-225ENST00000585121 DNAH2Q9P225 4427 aa8.69□□□□□ -1.02
SS18-225ENST00000585121 TRGV2A0A075B6R0 118 aa8.69□□□□□ -1.02
SS18-225ENST00000585121 IGHV1OR15-1A0A075B7D0 117 aa8.69□□□□□ -1.02
SS18-225ENST00000585121 SOHLH1Q5JUK2 328 aa8.69□□□□□ -1.02
SS18-225ENST00000585121 AKR1C8PQ5T2L2 129 aa8.69□□□□□ -1.02
SS18-225ENST00000585121 SLC7A5P1Q8MH63 180 aa8.69□□□□□ -1.02
SS18-225ENST00000585121 ZFAND2AQ8N6M9 145 aa8.69□□□□□ -1.02
SS18-225ENST00000585121 LYPD6BQ8NI32 183 aa8.69□□□□□ -1.02
SS18-225ENST00000585121 TRGV1A0A0A0MS02 117 aa8.68□□□□□ -1.02
SS18-225ENST00000585121 PGPA6NDG6 321 aa8.68□□□□□ -1.02
SS18-225ENST00000585121 DIRC3C9JPN6 131 aa8.68□□□□□ -1.02
SS18-225ENST00000585121 RAB2AP61019 212 aa8.68□□□□□ -1.02
SS18-225ENST00000585121 LCE2DQ5TA82 110 aaPredicted RBP8.68□□□□□ -1.02
SS18-225ENST00000585121 Q8TAT8 98 aa8.68□□□□□ -1.02
SS18-225ENST00000585121 PCNPQ8WW12 178 aaKnown RBP8.68□□□□□ -1.02
SS18-225ENST00000585121 LENEPQ9Y5L5 61 aa8.68□□□□□ -1.02
SS18-225ENST00000585121 DNAH17Q9UFH2 4485 aa8.68□□□□□ -1.02
SS18-225ENST00000585121 TRAV26-1A0A087WT03 109 aa8.67□□□□□ -1.02
SS18-225ENST00000585121 CDC34P49427 236 aaPredicted RBP8.67□□□□□ -1.02
SS18-225ENST00000585121 IBA57Q5T440 356 aaKnown RBP8.67□□□□□ -1.02
SS18-225ENST00000585121 Q6ZTI0 123 aa8.67□□□□□ -1.02
SS18-225ENST00000585121 RPH3ALQ9UNE2 315 aa8.67□□□□□ -1.02
SS18-225ENST00000585121 A0A0J9YY99 117 aa8.66□□□□□ -1.02
SS18-225ENST00000585121 EIF3GO75821 320 aaKnown RBP eCLIP8.66□□□□□ -1.02
SS18-225ENST00000585121 TCL1AP56279 114 aa8.66□□□□□ -1.02
SS18-225ENST00000585121 PRR9Q5T870 116 aa8.66□□□□□ -1.02
SS18-225ENST00000585121 ARL6IP6Q8N6S5 226 aa8.66□□□□□ -1.02
SS18-225ENST00000585121 C11orf72Q8NBR9 251 aa8.66□□□□□ -1.02
SS18-225ENST00000585121 RAB19A4D1S5 217 aa8.65□□□□□ -1.02
SS18-225ENST00000585121 PRSS29PA6NIE9 313 aa8.65□□□□□ -1.02
SS18-225ENST00000585121 H3BNG1 76 aa8.65□□□□□ -1.02
SS18-225ENST00000585121 TEX46H3BTG2 121 aa8.65□□□□□ -1.02
SS18-225ENST00000585121 HMGB3O15347 200 aaKnown RBP8.65□□□□□ -1.02
SS18-225ENST00000585121 ATP6V1G1O75348 118 aa8.65□□□□□ -1.02
SS18-225ENST00000585121 H2AFB1P0C5Y9 115 aa8.65□□□□□ -1.02
SS18-225ENST00000585121 ZNF415Q09FC8 603 aa8.65□□□□□ -1.02
SS18-225ENST00000585121 Q6ZR54 194 aa8.65□□□□□ -1.02
SS18-225ENST00000585121 GOLT1AQ6ZVE7 132 aa8.65□□□□□ -1.02
SS18-225ENST00000585121 FAM213BQ8TBF2 198 aa8.65□□□□□ -1.02
SS18-225ENST00000585121 TMPRSS5Q9H3S3 457 aa8.65□□□□□ -1.02
SS18-225ENST00000585121 KLF12Q9Y4X4 402 aa8.65□□□□□ -1.02
SS18-225ENST00000585121 TRAV1-1A0A0B4J248 108 aa8.64□□□□□ -1.03
SS18-225ENST00000585121 SPINK4O60575 86 aa8.64□□□□□ -1.03
SS18-225ENST00000585121 ARL14EPLP0DKL9 152 aa8.64□□□□□ -1.03
SS18-225ENST00000585121 HOXA5P20719 270 aa8.64□□□□□ -1.03
SS18-225ENST00000585121 S100A1P23297 94 aa8.64□□□□□ -1.03
SS18-225ENST00000585121 FHITP49789 147 aa8.64□□□□□ -1.03
SS18-225ENST00000585121 C1orf134Q5TEV5 83 aa8.64□□□□□ -1.03
SS18-225ENST00000585121 FAM159AQ6UWV7 190 aa8.64□□□□□ -1.03
SS18-225ENST00000585121 COMMD7Q86VX2 200 aa8.64□□□□□ -1.03
SS18-225ENST00000585121 MBD3L1Q8WWY6 194 aa8.64□□□□□ -1.03
SS18-225ENST00000585121 C18orf15Q96N68 181 aa8.64□□□□□ -1.03
SS18-225ENST00000585121 ACTR3CQ9C0K3 210 aaPredicted RBP8.64□□□□□ -1.03
SS18-225ENST00000585121 TP53TG3Q9ULZ0 132 aa8.64□□□□□ -1.03
SS18-225ENST00000585121 FAT2Q9NYQ8 4349 aa8.64□□□□□ -1.03
SS18-225ENST00000585121 TRGV11A0A075B6L2 103 aa8.64□□□□□ -1.03
SS18-225ENST00000585121 SERTM2A0A1B0GWG4 89 aa8.64□□□□□ -1.03
SS18-225ENST00000585121 K7EQM0 130 aa8.64□□□□□ -1.03
SS18-225ENST00000585121 RTL8CO15255 209 aa8.64□□□□□ -1.03
SS18-225ENST00000585121 STAG3L2P0CL84 134 aa8.64□□□□□ -1.03
SS18-225ENST00000585121 STAG3L3P0CL85 134 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms