RNA–Protein interactions for RNA: ENST00000582092.1

SS18-220, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best)

Gene SS18, Length 215 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-220ENST00000582092 TMSB15BA0A087X1C1 80 aa7.05□□□□□ -1.28
SS18-220ENST00000582092 TRAV8-2A0A0B4J237 113 aa7.05□□□□□ -1.28
SS18-220ENST00000582092 A0A1B0GW15 77 aa7.05□□□□□ -1.28
SS18-220ENST00000582092 UBE2CO00762 179 aa7.05□□□□□ -1.28
SS18-220ENST00000582092 SH2D1AO60880 128 aa7.05□□□□□ -1.28
SS18-220ENST00000582092 CRISP2P16562 243 aa7.05□□□□□ -1.28
SS18-220ENST00000582092 TFPI2P48307 235 aa7.05□□□□□ -1.28
SS18-220ENST00000582092 HBBP68871 147 aa7.05□□□□□ -1.28
SS18-220ENST00000582092 HIST1H1AQ02539 215 aaPredicted RBP7.05□□□□□ -1.28
SS18-220ENST00000582092 PRR31Q5SQ13 230 aa7.05□□□□□ -1.28
SS18-220ENST00000582092 EBLN2Q6P2I7 272 aa7.05□□□□□ -1.28
SS18-220ENST00000582092 LINC00322Q6ZN03 302 aaPredicted RBP7.05□□□□□ -1.28
SS18-220ENST00000582092 C9orf47Q6ZRZ4 202 aa7.05□□□□□ -1.28
SS18-220ENST00000582092 BAGE3Q86Y29 109 aa7.05□□□□□ -1.28
SS18-220ENST00000582092 Q8TAT8 98 aa7.05□□□□□ -1.28
SS18-220ENST00000582092 AGPAT4-IT1Q9H0P7 198 aa7.05□□□□□ -1.28
SS18-220ENST00000582092 LENEPQ9Y5L5 61 aa7.05□□□□□ -1.28
SS18-220ENST00000582092 A0A1B0GUT8 65 aa7.04□□□□□ -1.28
SS18-220ENST00000582092 A0A1W2PRX2 142 aa7.04□□□□□ -1.28
SS18-220ENST00000582092 C2orf70A6NJV1 201 aa7.04□□□□□ -1.28
SS18-220ENST00000582092 A8MWP6 167 aa7.04□□□□□ -1.28
SS18-220ENST00000582092 PRAC2D3DTV9 90 aa7.04□□□□□ -1.28
SS18-220ENST00000582092 GPX1P07203 203 aa7.04□□□□□ -1.28
SS18-220ENST00000582092 SLURP1P55000 103 aa7.04□□□□□ -1.28
SS18-220ENST00000582092 KLF5Q13887 457 aaPredicted RBP7.04□□□□□ -1.28
SS18-220ENST00000582092 TCTEX1D4Q5JR98 221 aa7.04□□□□□ -1.28
SS18-220ENST00000582092 WIPF2Q8TF74 440 aaPredicted RBP7.04□□□□□ -1.28
SS18-220ENST00000582092 MS4A6AQ9H2W1 248 aa7.04□□□□□ -1.28
SS18-220ENST00000582092 TSSC4Q9Y5U2 329 aaPredicted RBP7.04□□□□□ -1.28
SS18-220ENST00000582092 TMEM213A2RRL7 107 aa7.03□□□□□ -1.28
SS18-220ENST00000582092 NPIPB6E9PJ23 425 aa7.03□□□□□ -1.28
SS18-220ENST00000582092 DUSP14O95147 198 aaKnown RBP7.03□□□□□ -1.28
SS18-220ENST00000582092 GZMBP10144 247 aa7.03□□□□□ -1.28
SS18-220ENST00000582092 PROK1P58294 105 aa7.03□□□□□ -1.28
SS18-220ENST00000582092 DEFB136Q30KP8 78 aa7.03□□□□□ -1.28
SS18-220ENST00000582092 PDZD11Q5EBL8 140 aa7.03□□□□□ -1.28
SS18-220ENST00000582092 TMEM136Q6ZRR5 245 aa7.03□□□□□ -1.28
SS18-220ENST00000582092 SMIM15Q7Z3B0 74 aa7.03□□□□□ -1.28
SS18-220ENST00000582092 COX8CQ7Z4L0 72 aa7.03□□□□□ -1.28
SS18-220ENST00000582092 OR8A1Q8NGG7 326 aa7.03□□□□□ -1.28
SS18-220ENST00000582092 CITED1Q99966 193 aa7.03□□□□□ -1.28
SS18-220ENST00000582092 J3KRW8 73 aa7.02□□□□□ -1.29
SS18-220ENST00000582092 LEPP41159 167 aa7.02□□□□□ -1.29
SS18-220ENST00000582092 PSMG4Q5JS54 123 aa7.02□□□□□ -1.29
SS18-220ENST00000582092 C11orf44Q8N8P7 122 aa7.02□□□□□ -1.29
SS18-220ENST00000582092 FER1L6-AS1Q8NA97 138 aa7.02□□□□□ -1.29
SS18-220ENST00000582092 OR9G4Q8NGQ1 327 aa7.02□□□□□ -1.29
SS18-220ENST00000582092 TMEM18Q96B42 140 aa7.02□□□□□ -1.29
SS18-220ENST00000582092 C20orf173Q96LM9 149 aa7.02□□□□□ -1.29
SS18-220ENST00000582092 SELENOKQ9Y6D0 94 aa7.02□□□□□ -1.29
SS18-220ENST00000582092 TRAV21A0A0B4J279 112 aa7.01□□□□□ -1.29
SS18-220ENST00000582092 F2Z2F3 143 aa7.01□□□□□ -1.29
SS18-220ENST00000582092 CCL24O00175 119 aa7.01□□□□□ -1.29
SS18-220ENST00000582092 ZNF688P0C7X2 276 aa7.01□□□□□ -1.29
SS18-220ENST00000582092 ZNF705DP0CH99 300 aaPredicted RBP7.01□□□□□ -1.29
SS18-220ENST00000582092 ZNF705BP0CI00 300 aaPredicted RBP7.01□□□□□ -1.29
SS18-220ENST00000582092 CD28P10747 220 aa7.01□□□□□ -1.29
SS18-220ENST00000582092 TSPOP30536 169 aa7.01□□□□□ -1.29
SS18-220ENST00000582092 RNASE4P34096 147 aaKnown RBP7.01□□□□□ -1.29
SS18-220ENST00000582092 CRIP1P50238 77 aa7.01□□□□□ -1.29
SS18-220ENST00000582092 SSTP61278 116 aa7.01□□□□□ -1.29
SS18-220ENST00000582092 KIAA1644Q3SXP7 199 aa7.01□□□□□ -1.29
SS18-220ENST00000582092 LYZL1Q6UWQ5 148 aa7.01□□□□□ -1.29
SS18-220ENST00000582092 C18orf65Q6ZTR6 163 aa7.01□□□□□ -1.29
SS18-220ENST00000582092 GTSF1Q8WW33 167 aa7.01□□□□□ -1.29
SS18-220ENST00000582092 DUX3Q96PT4 197 aa7.01□□□□□ -1.29
SS18-220ENST00000582092 GPR61Q9BZJ8 451 aa7.01□□□□□ -1.29
SS18-220ENST00000582092 NAGKQ9UJ70 344 aa7.01□□□□□ -1.29
SS18-220ENST00000582092 WNK1Q9H4A3 2382 aa7.01□□□□□ -1.29
SS18-220ENST00000582092 FBN3Q75N90 2809 aa7□□□□□ -1.29
SS18-220ENST00000582092 TRBV7-9A0A0J9YWB2 115 aa7□□□□□ -1.29
SS18-220ENST00000582092 GRIFINA4D1Z8 144 aa7□□□□□ -1.29
SS18-220ENST00000582092 SOCS3O14543 225 aa7□□□□□ -1.29
SS18-220ENST00000582092 FABP4P15090 132 aa7□□□□□ -1.29
SS18-220ENST00000582092 S100A4P26447 101 aaKnown RBP7□□□□□ -1.29
SS18-220ENST00000582092 SRIP30626 198 aa7□□□□□ -1.29
SS18-220ENST00000582092 FOXA3P55318 350 aaPredicted RBP7□□□□□ -1.29
SS18-220ENST00000582092 TWIST1Q15672 202 aa7□□□□□ -1.29
SS18-220ENST00000582092 OR10J3Q5JRS4 329 aa7□□□□□ -1.29
SS18-220ENST00000582092 HIST3H2BBQ8N257 126 aa7□□□□□ -1.29
SS18-220ENST00000582092 DLX4Q92988 240 aaPredicted RBP7□□□□□ -1.29
SS18-220ENST00000582092 SAMD10Q9BYL1 202 aa7□□□□□ -1.29
SS18-220ENST00000582092 TENM1Q9UKZ4 2725 aa7□□□□□ -1.29
SS18-220ENST00000582092 OR4C46A6NHA9 309 aa6.99□□□□□ -1.29
SS18-220ENST00000582092 K7EQG2 157 aa6.99□□□□□ -1.29
SS18-220ENST00000582092 PHOX2AO14813 284 aa6.99□□□□□ -1.29
SS18-220ENST00000582092 ARMS2P0C7Q2 107 aa6.99□□□□□ -1.29
SS18-220ENST00000582092 ZNF80P51504 273 aaPredicted RBP6.99□□□□□ -1.29
SS18-220ENST00000582092 CMC4P56277 68 aaPredicted RBP6.99□□□□□ -1.29
SS18-220ENST00000582092 Q0VG73 95 aa6.99□□□□□ -1.29
SS18-220ENST00000582092 LINC01559Q495D7 138 aa6.99□□□□□ -1.29
SS18-220ENST00000582092 COA6Q5JTJ3 125 aaKnown RBP6.99□□□□□ -1.29
SS18-220ENST00000582092 OR10D4PQ8NGN7 298 aa6.99□□□□□ -1.29
SS18-220ENST00000582092 DCANP1Q8TF63 244 aa6.99□□□□□ -1.29
SS18-220ENST00000582092 CITED2Q99967 270 aaPredicted RBP6.99□□□□□ -1.29
SS18-220ENST00000582092 SSBP4Q9BWG4 385 aaPredicted RBP6.99□□□□□ -1.29
SS18-220ENST00000582092 TRAV2A0A0B4J234 112 aa6.98□□□□□ -1.29
SS18-220ENST00000582092 A0A1B0GXF2 115 aa6.98□□□□□ -1.29
SS18-220ENST00000582092 F6UB75 175 aa6.98□□□□□ -1.29
SS18-220ENST00000582092 FRMD6-AS1P0C7T7 363 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms