RNA–Protein interactions for RNA: ENST00000577664.5

CDK5RAP3-204, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 568 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-204ENST00000577664 UBE2CO00762 179 aa8.14□□□□□ -1.11
CDK5RAP3-204ENST00000577664 CRXO43186 299 aaPredicted RBP8.14□□□□□ -1.11
CDK5RAP3-204ENST00000577664 TSPOP30536 169 aa8.14□□□□□ -1.11
CDK5RAP3-204ENST00000577664 AKR1C3P42330 323 aa8.14□□□□□ -1.11
CDK5RAP3-204ENST00000577664 CDKN1BP46527 198 aa8.14□□□□□ -1.11
CDK5RAP3-204ENST00000577664 TMEM183AQ8IXX5 376 aa8.14□□□□□ -1.11
CDK5RAP3-204ENST00000577664 ZFAND2AQ8N6M9 145 aa8.14□□□□□ -1.11
CDK5RAP3-204ENST00000577664 IGF2BP2-AS1Q96M15 143 aa8.14□□□□□ -1.11
CDK5RAP3-204ENST00000577664 C20orf144Q9BQM9 153 aa8.14□□□□□ -1.11
CDK5RAP3-204ENST00000577664 CSTL1Q9H114 145 aa8.14□□□□□ -1.11
CDK5RAP3-204ENST00000577664 PARLQ9H300 379 aa8.14□□□□□ -1.11
CDK5RAP3-204ENST00000577664 TRBV20OR9-2A0A075B6H5 130 aa8.13□□□□□ -1.11
CDK5RAP3-204ENST00000577664 TRAV34A0A0B4J273 112 aa8.13□□□□□ -1.11
CDK5RAP3-204ENST00000577664 IGLV2-8P01709 118 aa8.13□□□□□ -1.11
CDK5RAP3-204ENST00000577664 LEPP41159 167 aa8.13□□□□□ -1.11
CDK5RAP3-204ENST00000577664 UBE2G1P62253 170 aa8.13□□□□□ -1.11
CDK5RAP3-204ENST00000577664 COMMD7Q86VX2 200 aa8.13□□□□□ -1.11
CDK5RAP3-204ENST00000577664 CSNK1G2-AS1Q8NCQ2 148 aa8.13□□□□□ -1.11
CDK5RAP3-204ENST00000577664 OR4B1Q8NGF8 309 aa8.13□□□□□ -1.11
CDK5RAP3-204ENST00000577664 DERL1Q9BUN8 251 aa8.13□□□□□ -1.11
CDK5RAP3-204ENST00000577664 C1QTNF4Q9BXJ3 329 aa8.13□□□□□ -1.11
CDK5RAP3-204ENST00000577664 TUBA4BQ9H853 241 aa8.13□□□□□ -1.11
CDK5RAP3-204ENST00000577664 TMEM218A2RU14 115 aa8.12□□□□□ -1.11
CDK5RAP3-204ENST00000577664 ZNF324O75467 553 aaPredicted RBP8.12□□□□□ -1.11
CDK5RAP3-204ENST00000577664 APOC4P55056 127 aa8.12□□□□□ -1.11
CDK5RAP3-204ENST00000577664 C10orf91Q5T1B1 145 aa8.12□□□□□ -1.11
CDK5RAP3-204ENST00000577664 Q6AWC8 147 aa8.12□□□□□ -1.11
CDK5RAP3-204ENST00000577664 Q6ZWC4 215 aa8.12□□□□□ -1.11
CDK5RAP3-204ENST00000577664 Q86TA4 180 aa8.12□□□□□ -1.11
CDK5RAP3-204ENST00000577664 BAGE2Q86Y30 109 aa8.12□□□□□ -1.11
CDK5RAP3-204ENST00000577664 NDFIP1Q9BT67 221 aa8.12□□□□□ -1.11
CDK5RAP3-204ENST00000577664 TREM1Q9NP99 234 aa8.12□□□□□ -1.11
CDK5RAP3-204ENST00000577664 RPH3ALQ9UNE2 315 aa8.12□□□□□ -1.11
CDK5RAP3-204ENST00000577664 ZNF674Q2M3X9 581 aa8.11□□□□□ -1.11
CDK5RAP3-204ENST00000577664 SMUG1Q53HV7 270 aa8.11□□□□□ -1.11
CDK5RAP3-204ENST00000577664 SOHLH1Q5JUK2 328 aa8.11□□□□□ -1.11
CDK5RAP3-204ENST00000577664 PRNTQ86SH4 94 aa8.11□□□□□ -1.11
CDK5RAP3-204ENST00000577664 SGK494Q96LW2 274 aa8.11□□□□□ -1.11
CDK5RAP3-204ENST00000577664 LINC00467Q9BRT7 94 aa8.11□□□□□ -1.11
CDK5RAP3-204ENST00000577664 ABCA13Q86UQ4 5058 aa8.11□□□□□ -1.11
CDK5RAP3-204ENST00000577664 ZNF727A8MUV8 499 aa8.1□□□□□ -1.11
CDK5RAP3-204ENST00000577664 GCGP01275 180 aa8.1□□□□□ -1.11
CDK5RAP3-204ENST00000577664 SFTA3P0C7M3 94 aa8.1□□□□□ -1.11
CDK5RAP3-204ENST00000577664 FRMD6-AS1P0C7T7 363 aa8.1□□□□□ -1.11
CDK5RAP3-204ENST00000577664 PRB4P10163 310 aaPredicted RBP8.1□□□□□ -1.11
CDK5RAP3-204ENST00000577664 GNG4P50150 75 aa8.1□□□□□ -1.11
CDK5RAP3-204ENST00000577664 CRIP1P50238 77 aa8.1□□□□□ -1.11
CDK5RAP3-204ENST00000577664 TMEM241Q24JQ0 296 aa8.1□□□□□ -1.11
CDK5RAP3-204ENST00000577664 CENPWQ5EE01 88 aa8.1□□□□□ -1.11
CDK5RAP3-204ENST00000577664 OCC1Q8TAD7 63 aa8.1□□□□□ -1.11
CDK5RAP3-204ENST00000577664 Q8TAT8 98 aa8.1□□□□□ -1.11
CDK5RAP3-204ENST00000577664 ASCL2Q99929 193 aa8.1□□□□□ -1.11
CDK5RAP3-204ENST00000577664 SMIM7Q9BQ49 75 aa8.1□□□□□ -1.11
CDK5RAP3-204ENST00000577664 SEC11CQ9BY50 192 aa8.1□□□□□ -1.11
CDK5RAP3-204ENST00000577664 BIN3Q9NQY0 253 aa8.1□□□□□ -1.11
CDK5RAP3-204ENST00000577664 TP53TG1Q9Y2A0 90 aa8.1□□□□□ -1.11
CDK5RAP3-204ENST00000577664 ALMS1Q8TCU4 4167 aa8.1□□□□□ -1.11
CDK5RAP3-204ENST00000577664 C7orf71A4D174 169 aa8.09□□□□□ -1.11
CDK5RAP3-204ENST00000577664 FABP5P3A8MUU1 101 aa8.09□□□□□ -1.11
CDK5RAP3-204ENST00000577664 M0R2Z0 102 aa8.09□□□□□ -1.11
CDK5RAP3-204ENST00000577664 IGKV3-20P01619 116 aa8.09□□□□□ -1.11
CDK5RAP3-204ENST00000577664 GPX1P07203 203 aa8.09□□□□□ -1.11
CDK5RAP3-204ENST00000577664 PFN1P07737 140 aaKnown RBP8.09□□□□□ -1.11
CDK5RAP3-204ENST00000577664 RPL35AP18077 110 aaKnown RBP8.09□□□□□ -1.11
CDK5RAP3-204ENST00000577664 ZNF80P51504 273 aaPredicted RBP8.09□□□□□ -1.11
CDK5RAP3-204ENST00000577664 SPINK13Q1W4C9 94 aa8.09□□□□□ -1.11
CDK5RAP3-204ENST00000577664 TDRG1Q3Y452 100 aa8.09□□□□□ -1.11
CDK5RAP3-204ENST00000577664 GFI1BQ5VTD9 330 aa8.09□□□□□ -1.11
CDK5RAP3-204ENST00000577664 ZNF705AQ6ZN79 300 aaPredicted RBP8.09□□□□□ -1.11
CDK5RAP3-204ENST00000577664 TMEM256Q8N2U0 113 aa8.09□□□□□ -1.11
CDK5RAP3-204ENST00000577664 C8orf49Q96NF6 230 aa8.09□□□□□ -1.11
CDK5RAP3-204ENST00000577664 NEU1Q99519 415 aa8.09□□□□□ -1.11
CDK5RAP3-204ENST00000577664 SDF2L1Q9HCN8 221 aa8.09□□□□□ -1.11
CDK5RAP3-204ENST00000577664 NAT8Q9UHE5 227 aa8.09□□□□□ -1.11
CDK5RAP3-204ENST00000577664 TP53TG3Q9ULZ0 132 aa8.09□□□□□ -1.11
CDK5RAP3-204ENST00000577664 TRAV21A0A0B4J279 112 aa8.08□□□□□ -1.12
CDK5RAP3-204ENST00000577664 C19orf71A6NCJ1 209 aa8.08□□□□□ -1.12
CDK5RAP3-204ENST00000577664 KIR3DS1Q14943 382 aa8.08□□□□□ -1.12
CDK5RAP3-204ENST00000577664 PRR9Q5T870 116 aa8.08□□□□□ -1.12
CDK5RAP3-204ENST00000577664 LINC01551Q86U37 167 aa8.08□□□□□ -1.12
CDK5RAP3-204ENST00000577664 ZNF575Q86XF7 245 aa8.08□□□□□ -1.12
CDK5RAP3-204ENST00000577664 C1orf158Q8N1D5 194 aa8.08□□□□□ -1.12
CDK5RAP3-204ENST00000577664 RNF183Q96D59 192 aa8.08□□□□□ -1.12
CDK5RAP3-204ENST00000577664 ZC2HC1AQ96GY0 325 aa8.08□□□□□ -1.12
CDK5RAP3-204ENST00000577664 KRBOX1C9JBD0 128 aa8.07□□□□□ -1.12
CDK5RAP3-204ENST00000577664 H7BYZ3 331 aa8.07□□□□□ -1.12
CDK5RAP3-204ENST00000577664 K7EN84 100 aa8.07□□□□□ -1.12
CDK5RAP3-204ENST00000577664 CA1P00915 261 aaPredicted RBP8.07□□□□□ -1.12
CDK5RAP3-204ENST00000577664 RBMY1A1P0DJD3 496 aaKnown RBP8.07□□□□□ -1.12
CDK5RAP3-204ENST00000577664 RBMY1CP0DJD4 496 aa8.07□□□□□ -1.12
CDK5RAP3-204ENST00000577664 ADCYAP1P18509 176 aa8.07□□□□□ -1.12
CDK5RAP3-204ENST00000577664 PNRC1Q12796 327 aaPredicted RBP8.07□□□□□ -1.12
CDK5RAP3-204ENST00000577664 RBMY1FQ15415 496 aaKnown RBP8.07□□□□□ -1.12
CDK5RAP3-204ENST00000577664 FAM162BQ5T6X4 162 aa8.07□□□□□ -1.12
CDK5RAP3-204ENST00000577664 ZFAND6Q6FIF0 208 aa8.07□□□□□ -1.12
CDK5RAP3-204ENST00000577664 FAM231DQ6ZW35 169 aa8.07□□□□□ -1.12
CDK5RAP3-204ENST00000577664 PYGO2Q9BRQ0 406 aa8.07□□□□□ -1.12
CDK5RAP3-204ENST00000577664 NIPSNAP3BQ9BS92 247 aa8.07□□□□□ -1.12
CDK5RAP3-204ENST00000577664 XCL2Q9UBD3 114 aa8.07□□□□□ -1.12
CDK5RAP3-204ENST00000577664 CARHSP1Q9Y2V2 147 aaKnown RBP8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 95.6 ms