RNA–Protein interactions for RNA: ENST00000558288.1

HMG20A-204, Transcript of high mobility group 20A, humanhuman

Gene HMG20A, Length 3,558 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-204ENST00000558288 NBEAL1Q6ZS30 2694 aa3.98□□□□□ -1.77
HMG20A-204ENST00000558288 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.98□□□□□ -1.77
HMG20A-204ENST00000558288 IGKV2-40A0A087WW87 121 aaPredicted RBP3.98□□□□□ -1.77
HMG20A-204ENST00000558288 C19orf84I3L1E1 186 aa3.98□□□□□ -1.77
HMG20A-204ENST00000558288 OVOL3O00110 214 aa3.98□□□□□ -1.77
HMG20A-204ENST00000558288 IGKV2D-40P01614 121 aaPredicted RBP3.98□□□□□ -1.77
HMG20A-204ENST00000558288 IGLV1-44P01699 117 aa3.98□□□□□ -1.77
HMG20A-204ENST00000558288 IGLV2-23P01705 113 aa3.98□□□□□ -1.77
HMG20A-204ENST00000558288 IL4P05112 153 aa3.98□□□□□ -1.77
HMG20A-204ENST00000558288 IGFL3Q6UXB1 125 aa3.98□□□□□ -1.77
HMG20A-204ENST00000558288 C1orf162Q8NEQ5 155 aaPredicted RBP3.98□□□□□ -1.77
HMG20A-204ENST00000558288 Q8TAT8 98 aa3.98□□□□□ -1.77
HMG20A-204ENST00000558288 ZNF502Q8TBZ5 544 aa3.98□□□□□ -1.77
HMG20A-204ENST00000558288 RPEQ96AT9 228 aa3.98□□□□□ -1.77
HMG20A-204ENST00000558288 PLSCR4Q9NRQ2 329 aa3.98□□□□□ -1.77
HMG20A-204ENST00000558288 MSRB1Q9NZV6 116 aa3.98□□□□□ -1.77
HMG20A-204ENST00000558288 CYSLTR1Q9Y271 337 aa3.98□□□□□ -1.77
HMG20A-204ENST00000558288 RAI1Q7Z5J4 1906 aaPredicted RBP3.98□□□□□ -1.77
HMG20A-204ENST00000558288 C16orf97H3BN30 126 aa3.98□□□□□ -1.77
HMG20A-204ENST00000558288 GAS8-AS1O95177 125 aa3.98□□□□□ -1.77
HMG20A-204ENST00000558288 CNIH1O95406 144 aa3.98□□□□□ -1.77
HMG20A-204ENST00000558288 IGHV1-46P01743 117 aa3.98□□□□□ -1.77
HMG20A-204ENST00000558288 CRYGCP07315 174 aa3.98□□□□□ -1.77
HMG20A-204ENST00000558288 PSMB2P49721 201 aa3.98□□□□□ -1.77
HMG20A-204ENST00000558288 TMEM30BQ3MIR4 351 aa3.98□□□□□ -1.77
HMG20A-204ENST00000558288 SIGLEC15Q6ZMC9 328 aa3.98□□□□□ -1.77
HMG20A-204ENST00000558288 C8orf86Q6ZUL3 223 aa3.98□□□□□ -1.77
HMG20A-204ENST00000558288 MAPKAPK5-AS1Q8N8E1 139 aa3.98□□□□□ -1.77
HMG20A-204ENST00000558288 GATD1Q8NB37 220 aa3.98□□□□□ -1.77
HMG20A-204ENST00000558288 MYOZ3Q8TDC0 251 aa3.98□□□□□ -1.77
HMG20A-204ENST00000558288 GLMPQ8WWB7 406 aa3.98□□□□□ -1.77
HMG20A-204ENST00000558288 TM2D2Q9BX73 214 aa3.98□□□□□ -1.77
HMG20A-204ENST00000558288 MRPL35Q9NZE8 188 aaKnown RBP3.98□□□□□ -1.77
HMG20A-204ENST00000558288 TMEM14CQ9P0S9 112 aa3.98□□□□□ -1.77
HMG20A-204ENST00000558288 HHLA3Q9XRX5 114 aa3.98□□□□□ -1.77
HMG20A-204ENST00000558288 U3KQK5 164 aa3.98□□□□□ -1.77
HMG20A-204ENST00000558288 DSCAML1Q8TD84 2053 aa3.98□□□□□ -1.77
HMG20A-204ENST00000558288 ATRQ13535 2644 aa3.98□□□□□ -1.77
HMG20A-204ENST00000558288 GATA1P15976 413 aaPredicted RBP3.98□□□□□ -1.77
HMG20A-204ENST00000558288 RRN3P1Q2M238 152 aa3.98□□□□□ -1.77
HMG20A-204ENST00000558288 TMEM200BQ69YZ2 307 aa3.98□□□□□ -1.77
HMG20A-204ENST00000558288 PGPEP1Q9NXJ5 209 aa3.98□□□□□ -1.77
HMG20A-204ENST00000558288 SS18L2Q9UHA2 77 aa3.98□□□□□ -1.77
HMG20A-204ENST00000558288 FLNAP21333 2647 aaKnown RBP3.97□□□□□ -1.77
HMG20A-204ENST00000558288 AGRNO00468 2067 aa3.97□□□□□ -1.77
HMG20A-204ENST00000558288 H3BVH4 76 aa3.97□□□□□ -1.77
HMG20A-204ENST00000558288 ATP5LO75964 103 aa3.97□□□□□ -1.77
HMG20A-204ENST00000558288 TNFRSF6BO95407 300 aa3.97□□□□□ -1.77
HMG20A-204ENST00000558288 MT-ATP8P03928 68 aa3.97□□□□□ -1.77
HMG20A-204ENST00000558288 EGR2P11161 476 aaPredicted RBP3.97□□□□□ -1.77
HMG20A-204ENST00000558288 GLRXP35754 106 aa3.97□□□□□ -1.77
HMG20A-204ENST00000558288 DLX1P56177 255 aa3.97□□□□□ -1.77
HMG20A-204ENST00000558288 FOXI1Q12951 378 aa3.97□□□□□ -1.77
HMG20A-204ENST00000558288 PSMG4Q5JS54 123 aa3.97□□□□□ -1.77
HMG20A-204ENST00000558288 IGFL4Q6B9Z1 124 aa3.97□□□□□ -1.77
HMG20A-204ENST00000558288 SHANK2-AS3Q9BTD1 123 aa3.97□□□□□ -1.77
HMG20A-204ENST00000558288 NXT2Q9NPJ8 142 aaKnown RBP3.97□□□□□ -1.77
HMG20A-204ENST00000558288 SLC25A15Q9Y619 301 aa3.97□□□□□ -1.77
HMG20A-204ENST00000558288 DCHS2Q6V1P9 2916 aa3.97□□□□□ -1.77
HMG20A-204ENST00000558288 STAB1Q9NY15 2570 aa3.97□□□□□ -1.77
HMG20A-204ENST00000558288 HOXA3O43365 443 aaPredicted RBP3.97□□□□□ -1.77
HMG20A-204ENST00000558288 TGFAP01135 160 aa3.97□□□□□ -1.77
HMG20A-204ENST00000558288 CCL17Q92583 94 aa3.97□□□□□ -1.77
HMG20A-204ENST00000558288 RNF125Q96EQ8 232 aa3.97□□□□□ -1.77
HMG20A-204ENST00000558288 KLK15Q9H2R5 256 aa3.97□□□□□ -1.77
HMG20A-204ENST00000558288 FBXL15Q9H469 300 aa3.97□□□□□ -1.77
HMG20A-204ENST00000558288 UFC1Q9Y3C8 167 aa3.97□□□□□ -1.77
HMG20A-204ENST00000558288 NDUFB3O43676 98 aa3.97□□□□□ -1.77
HMG20A-204ENST00000558288 HOXB4P17483 251 aaPredicted RBP3.97□□□□□ -1.77
HMG20A-204ENST00000558288 SCGB1D4Q6XE38 83 aa3.97□□□□□ -1.77
HMG20A-204ENST00000558288 RNF183Q96D59 192 aa3.97□□□□□ -1.77
HMG20A-204ENST00000558288 ANAPC13Q9BS18 74 aa3.97□□□□□ -1.77
HMG20A-204ENST00000558288 C1QTNF4Q9BXJ3 329 aa3.97□□□□□ -1.77
HMG20A-204ENST00000558288 TRBV6-1A0A0K0K1D8 114 aa3.96□□□□□ -1.78
HMG20A-204ENST00000558288 OR11H12B2RN74 326 aa3.96□□□□□ -1.78
HMG20A-204ENST00000558288 PAX8Q06710 450 aa3.96□□□□□ -1.78
HMG20A-204ENST00000558288 SRSF9Q13242 221 aaKnown RBP eCLIP3.96□□□□□ -1.78
HMG20A-204ENST00000558288 OR11H1Q8NG94 326 aa3.96□□□□□ -1.78
HMG20A-204ENST00000558288 OR11H2Q8NH07 326 aa3.96□□□□□ -1.78
HMG20A-204ENST00000558288 DLX4Q92988 240 aaPredicted RBP3.96□□□□□ -1.78
HMG20A-204ENST00000558288 PTH2Q96A98 100 aa3.96□□□□□ -1.78
HMG20A-204ENST00000558288 PLCE1Q9P212 2302 aa3.96□□□□□ -1.78
HMG20A-204ENST00000558288 SHISA9B4DS77 424 aa3.96□□□□□ -1.78
HMG20A-204ENST00000558288 H3BRN7 92 aa3.96□□□□□ -1.78
HMG20A-204ENST00000558288 IGKV1-17P01599 117 aa3.96□□□□□ -1.78
HMG20A-204ENST00000558288 ADORA2A-AS1P86434 159 aa3.96□□□□□ -1.78
HMG20A-204ENST00000558288 CDSNQ15517 529 aa3.96□□□□□ -1.78
HMG20A-204ENST00000558288 LCE2DQ5TA82 110 aaPredicted RBP3.96□□□□□ -1.78
HMG20A-204ENST00000558288 PPP1R27Q86WC6 154 aa3.96□□□□□ -1.78
HMG20A-204ENST00000558288 LINC00574Q9H8X3 128 aa3.96□□□□□ -1.78
HMG20A-204ENST00000558288 SIGLEC9Q9Y336 463 aa3.96□□□□□ -1.78
HMG20A-204ENST00000558288 IGHV3OR16-8A0A075B7F1 116 aa3.96□□□□□ -1.78
HMG20A-204ENST00000558288 TRAV26-2A0A0B4J265 109 aa3.96□□□□□ -1.78
HMG20A-204ENST00000558288 LINC01549A6NIU2 74 aa3.96□□□□□ -1.78
HMG20A-204ENST00000558288 GATA3P23771 443 aa3.96□□□□□ -1.78
HMG20A-204ENST00000558288 GATA4P43694 442 aa3.96□□□□□ -1.78
HMG20A-204ENST00000558288 EFNA4P52798 201 aa3.96□□□□□ -1.78
HMG20A-204ENST00000558288 TAL2Q16559 108 aa3.96□□□□□ -1.78
HMG20A-204ENST00000558288 LYPD1Q8N2G4 141 aa3.96□□□□□ -1.78
HMG20A-204ENST00000558288 PIFOQ8TCI5 191 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms