RNA–Protein interactions for RNA: ENST00000554659.5

VTI1B-204, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTI1B, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-204ENST00000554659 NBASA2RRP1 2371 aa11.11□□□□□ -0.63
VTI1B-204ENST00000554659 IGHV3-16A0A0C4DH30 117 aa11.11□□□□□ -0.63
VTI1B-204ENST00000554659 NXPH4O95158 308 aa11.11□□□□□ -0.63
VTI1B-204ENST00000554659 NPYP01303 97 aa11.11□□□□□ -0.63
VTI1B-204ENST00000554659 HLA-DRB4P13762 266 aa11.11□□□□□ -0.63
VTI1B-204ENST00000554659 COA6Q5JTJ3 125 aaKnown RBP11.11□□□□□ -0.63
VTI1B-204ENST00000554659 AMTNQ6UX39 209 aa11.11□□□□□ -0.63
VTI1B-204ENST00000554659 LINC01356Q8N9X3 169 aa11.11□□□□□ -0.63
VTI1B-204ENST00000554659 TPSG1Q9NRR2 321 aa11.11□□□□□ -0.63
VTI1B-204ENST00000554659 HLA-DRB4X5D2U9 266 aa11.11□□□□□ -0.63
VTI1B-204ENST00000554659 TRAV25A0A0B4J276 109 aa11.1□□□□□ -0.63
VTI1B-204ENST00000554659 GNLYP22749 145 aa11.1□□□□□ -0.63
VTI1B-204ENST00000554659 KLF5Q13887 457 aaPredicted RBP11.1□□□□□ -0.63
VTI1B-204ENST00000554659 MRPL35Q9NZE8 188 aaKnown RBP11.1□□□□□ -0.63
VTI1B-204ENST00000554659 NDUFA12Q9UI09 145 aa11.1□□□□□ -0.63
VTI1B-204ENST00000554659 COL6A6A6NMZ7 2263 aa11.1□□□□□ -0.63
VTI1B-204ENST00000554659 TRAV26-2A0A0B4J265 109 aa11.1□□□□□ -0.63
VTI1B-204ENST00000554659 SDHAF1A6NFY7 115 aa11.1□□□□□ -0.63
VTI1B-204ENST00000554659 K7ERJ3 54 aa11.1□□□□□ -0.63
VTI1B-204ENST00000554659 AZU1P20160 251 aa11.1□□□□□ -0.63
VTI1B-204ENST00000554659 TCTEX1D4Q5JR98 221 aa11.1□□□□□ -0.63
VTI1B-204ENST00000554659 RNF166Q96A37 237 aaPredicted RBP11.1□□□□□ -0.63
VTI1B-204ENST00000554659 NDUFA4O00483 81 aa11.1□□□□□ -0.63
VTI1B-204ENST00000554659 CARD19Q96LW7 228 aa11.1□□□□□ -0.63
VTI1B-204ENST00000554659 PYGO2Q9BRQ0 406 aa11.1□□□□□ -0.63
VTI1B-204ENST00000554659 SMIM2Q9BVW6 85 aa11.1□□□□□ -0.63
VTI1B-204ENST00000554659 GATA3P23771 443 aa11.1□□□□□ -0.63
VTI1B-204ENST00000554659 WDR81Q562E7 1941 aa11.1□□□□□ -0.63
VTI1B-204ENST00000554659 F8VRH5 84 aa11.09□□□□□ -0.63
VTI1B-204ENST00000554659 SPINK13Q1W4C9 94 aa11.09□□□□□ -0.63
VTI1B-204ENST00000554659 ZNF561-AS1K7EIQ3 104 aa11.09□□□□□ -0.63
VTI1B-204ENST00000554659 CRLF1O75462 422 aa11.09□□□□□ -0.63
VTI1B-204ENST00000554659 CEND1Q8N111 149 aa11.09□□□□□ -0.63
VTI1B-204ENST00000554659 DOCK7Q96N67 2140 aa11.09□□□□□ -0.63
VTI1B-204ENST00000554659 IGHV1OR15-1A0A075B7D0 117 aa11.08□□□□□ -0.63
VTI1B-204ENST00000554659 C8orf31Q8N9H6 132 aa11.08□□□□□ -0.63
VTI1B-204ENST00000554659 XCL2Q9UBD3 114 aa11.08□□□□□ -0.63
VTI1B-204ENST00000554659 HEATR5AQ86XA9 2040 aa11.08□□□□□ -0.64
VTI1B-204ENST00000554659 IGHV1-69DA0A0B4J2H0 117 aa11.08□□□□□ -0.64
VTI1B-204ENST00000554659 IGHV2-70DA0A0C4DH43 119 aa11.08□□□□□ -0.64
VTI1B-204ENST00000554659 G3V318 75 aa11.08□□□□□ -0.64
VTI1B-204ENST00000554659 IGHV1-69P01742 117 aa11.08□□□□□ -0.64
VTI1B-204ENST00000554659 ANXA2RQ3ZCQ2 193 aa11.08□□□□□ -0.64
VTI1B-204ENST00000554659 KLK9Q9UKQ9 250 aa11.08□□□□□ -0.64
VTI1B-204ENST00000554659 RUSC1-AS1Q66K80 236 aa11.08□□□□□ -0.64
VTI1B-204ENST00000554659 KIR2DL5BA0A0G2JN68 375 aa11.08□□□□□ -0.64
VTI1B-204ENST00000554659 KIR2DL5BA0A0G2JPC4 375 aa11.08□□□□□ -0.64
VTI1B-204ENST00000554659 KIR2DL5AQ8N109 375 aa11.08□□□□□ -0.64
VTI1B-204ENST00000554659 C20orf78Q9BR46 151 aa11.08□□□□□ -0.64
VTI1B-204ENST00000554659 MSMBP08118 114 aa11.08□□□□□ -0.64
VTI1B-204ENST00000554659 CFHR3Q02985 330 aa11.08□□□□□ -0.64
VTI1B-204ENST00000554659 KAAG1Q9UBP8 84 aa11.08□□□□□ -0.64
VTI1B-204ENST00000554659 TINCRA0A1B0GVN0 87 aa11.07□□□□□ -0.64
VTI1B-204ENST00000554659 RS1O15537 224 aa11.07□□□□□ -0.64
VTI1B-204ENST00000554659 SPANXDQ9BXN6 97 aa11.07□□□□□ -0.64
VTI1B-204ENST00000554659 SCRT2Q9NQ03 307 aa11.07□□□□□ -0.64
VTI1B-204ENST00000554659 TRBV25-1A0A075B6N4 114 aa11.07□□□□□ -0.64
VTI1B-204ENST00000554659 GAGE7O76087 117 aa11.07□□□□□ -0.64
VTI1B-204ENST00000554659 GAGE12FP0CL80 117 aa11.07□□□□□ -0.64
VTI1B-204ENST00000554659 GAGE12GP0CL81 117 aa11.07□□□□□ -0.64
VTI1B-204ENST00000554659 GAGE12IP0CL82 117 aa11.07□□□□□ -0.64
VTI1B-204ENST00000554659 HOXD3P31249 432 aaPredicted RBP11.07□□□□□ -0.64
VTI1B-204ENST00000554659 CRYBA4P53673 196 aa11.07□□□□□ -0.64
VTI1B-204ENST00000554659 DEFB121Q5J5C9 76 aa11.07□□□□□ -0.64
VTI1B-204ENST00000554659 NDUFS7O75251 213 aa11.06□□□□□ -0.64
VTI1B-204ENST00000554659 Q6ZSR3 168 aa11.06□□□□□ -0.64
VTI1B-204ENST00000554659 ANKRD29Q8N6D5 301 aa11.06□□□□□ -0.64
VTI1B-204ENST00000554659 ZNF407Q9C0G0 2248 aa11.06□□□□□ -0.64
VTI1B-204ENST00000554659 IGHV3-38A0A0C4DH36 116 aa11.06□□□□□ -0.64
VTI1B-204ENST00000554659 RBM3P98179 157 aaKnown RBP11.06□□□□□ -0.64
VTI1B-204ENST00000554659 NTN5Q8WTR8 489 aaPredicted RBP11.06□□□□□ -0.64
VTI1B-204ENST00000554659 USF3Q68DE3 2245 aa11.06□□□□□ -0.64
VTI1B-204ENST00000554659 SRSF2Q01130 221 aaKnown RBP11.06□□□□□ -0.64
VTI1B-204ENST00000554659 ZNF491Q8N8L2 437 aa11.06□□□□□ -0.64
VTI1B-204ENST00000554659 NKAPP1Q8N9T2 125 aa11.06□□□□□ -0.64
VTI1B-204ENST00000554659 C15orf53Q8NAA6 179 aa11.06□□□□□ -0.64
VTI1B-204ENST00000554659 BOD1L2Q8IYS8 172 aa11.06□□□□□ -0.64
VTI1B-204ENST00000554659 RIF1Q5UIP0 2472 aaKnown RBP11.05□□□□□ -0.64
VTI1B-204ENST00000554659 DIAPH2-AS1Q14236 149 aa11.05□□□□□ -0.64
VTI1B-204ENST00000554659 DSCR8Q96T75 97 aa11.05□□□□□ -0.64
VTI1B-204ENST00000554659 ZNF747Q9BV97 191 aa11.05□□□□□ -0.64
VTI1B-204ENST00000554659 CDKN1BP46527 198 aa11.05□□□□□ -0.64
VTI1B-204ENST00000554659 ZNRF2Q8NHG8 242 aa11.05□□□□□ -0.64
VTI1B-204ENST00000554659 IGLC7A0M8Q6 106 aa11.04□□□□□ -0.64
VTI1B-204ENST00000554659 B5MCH6 92 aa11.04□□□□□ -0.64
VTI1B-204ENST00000554659 J3QQQ9 107 aa11.04□□□□□ -0.64
VTI1B-204ENST00000554659 IGHG4P01861 327 aa11.04□□□□□ -0.64
VTI1B-204ENST00000554659 HLA-DMBP28068 263 aa11.04□□□□□ -0.64
VTI1B-204ENST00000554659 LYPD6Q86Y78 171 aa11.04□□□□□ -0.64
VTI1B-204ENST00000554659 RNF138Q8WVD3 245 aa11.04□□□□□ -0.64
VTI1B-204ENST00000554659 CCL25O15444 150 aa11.04□□□□□ -0.64
VTI1B-204ENST00000554659 KRTAP27-1Q3LI81 207 aa11.04□□□□□ -0.64
VTI1B-204ENST00000554659 ASPHD1Q5U4P2 390 aa11.04□□□□□ -0.64
VTI1B-204ENST00000554659 LINC01619G3V211 115 aa11.04□□□□□ -0.64
VTI1B-204ENST00000554659 C11orf53Q8IXP5 236 aa11.04□□□□□ -0.64
VTI1B-204ENST00000554659 K7ENP7 123 aa11.03□□□□□ -0.64
VTI1B-204ENST00000554659 C12orf74Q32Q52 190 aa11.03□□□□□ -0.64
VTI1B-204ENST00000554659 PRR30Q53SZ7 412 aaPredicted RBP11.03□□□□□ -0.64
VTI1B-204ENST00000554659 CDPF1Q6NVV7 123 aa11.03□□□□□ -0.64
VTI1B-204ENST00000554659 DKK2Q9UBU2 259 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms