RNA–Protein interactions for RNA: ENST00000544669.5

CPSF7-223, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,800 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-223ENST00000544669 PTPRQQ9UMZ3 2332 aa9.98□□□□□ -0.81
CPSF7-223ENST00000544669 IGHV3OR16-8A0A075B7F1 116 aa9.98□□□□□ -0.81
CPSF7-223ENST00000544669 C7orf71A4D174 169 aa9.98□□□□□ -0.81
CPSF7-223ENST00000544669 SMKR1H3BMG3 65 aa9.98□□□□□ -0.81
CPSF7-223ENST00000544669 DPM2O94777 84 aa9.98□□□□□ -0.81
CPSF7-223ENST00000544669 IGKCP01834 107 aa9.98□□□□□ -0.81
CPSF7-223ENST00000544669 SLC25A16P16260 332 aa9.98□□□□□ -0.81
CPSF7-223ENST00000544669 DSCR9P59020 149 aa9.98□□□□□ -0.81
CPSF7-223ENST00000544669 ANKRD39Q53RE8 183 aa9.98□□□□□ -0.81
CPSF7-223ENST00000544669 CLEC2AQ6UVW9 174 aa9.98□□□□□ -0.81
CPSF7-223ENST00000544669 MCRIP2Q9BUT9 160 aaKnown RBP9.98□□□□□ -0.81
CPSF7-223ENST00000544669 MSRB1Q9NZV6 116 aa9.98□□□□□ -0.81
CPSF7-223ENST00000544669 ZFHX4Q86UP3 3567 aa9.98□□□□□ -0.81
CPSF7-223ENST00000544669 IGHV7-4-1A0A0J9YVY3 117 aa9.98□□□□□ -0.81
CPSF7-223ENST00000544669 IGHV4-39P01824 125 aa9.98□□□□□ -0.81
CPSF7-223ENST00000544669 IGHV3-66A0A0C4DH42 116 aa9.97□□□□□ -0.81
CPSF7-223ENST00000544669 K7EMT4 169 aa9.97□□□□□ -0.81
CPSF7-223ENST00000544669 M0R381 172 aa9.97□□□□□ -0.81
CPSF7-223ENST00000544669 SMIM17P0DL12 118 aa9.97□□□□□ -0.81
CPSF7-223ENST00000544669 PLNP26678 52 aa9.97□□□□□ -0.81
CPSF7-223ENST00000544669 ASIPP42127 132 aa9.97□□□□□ -0.81
CPSF7-223ENST00000544669 ODF1Q14990 250 aa9.97□□□□□ -0.81
CPSF7-223ENST00000544669 LINC01548A6NM66 108 aa9.96□□□□□ -0.81
CPSF7-223ENST00000544669 S100A4P26447 101 aaKnown RBP9.96□□□□□ -0.81
CPSF7-223ENST00000544669 ID1P41134 155 aa9.96□□□□□ -0.81
CPSF7-223ENST00000544669 C10orf105Q8TEF2 133 aa9.96□□□□□ -0.81
CPSF7-223ENST00000544669 TMEM158Q8WZ71 300 aa9.96□□□□□ -0.81
CPSF7-223ENST00000544669 AKAP13Q12802 2813 aa9.96□□□□□ -0.81
CPSF7-223ENST00000544669 IGLV2-18A0A075B6J9 118 aa9.96□□□□□ -0.82
CPSF7-223ENST00000544669 TRAV12-1A0A0B4J245 112 aa9.96□□□□□ -0.82
CPSF7-223ENST00000544669 A6NDX4 124 aa9.96□□□□□ -0.82
CPSF7-223ENST00000544669 C9orf118A6NHY6 69 aa9.96□□□□□ -0.82
CPSF7-223ENST00000544669 PPIFP30405 207 aaKnown RBP9.96□□□□□ -0.82
CPSF7-223ENST00000544669 APRG1Q8IVJ8 170 aa9.96□□□□□ -0.82
CPSF7-223ENST00000544669 CCL19Q99731 98 aa9.96□□□□□ -0.82
CPSF7-223ENST00000544669 DPH3P1Q9H4G8 78 aa9.96□□□□□ -0.82
CPSF7-223ENST00000544669 MUC6Q6W4X9 2439 aa9.95□□□□□ -0.82
CPSF7-223ENST00000544669 ABCA1O95477 2261 aa9.95□□□□□ -0.82
CPSF7-223ENST00000544669 TMEM89A2RUT3 159 aa9.95□□□□□ -0.82
CPSF7-223ENST00000544669 CBY3A6NI87 242 aa9.95□□□□□ -0.82
CPSF7-223ENST00000544669 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.95□□□□□ -0.82
CPSF7-223ENST00000544669 NMUP48645 174 aa9.95□□□□□ -0.82
CPSF7-223ENST00000544669 LY6DQ14210 128 aa9.95□□□□□ -0.82
CPSF7-223ENST00000544669 TAL2Q16559 108 aa9.95□□□□□ -0.82
CPSF7-223ENST00000544669 UFC1Q9Y3C8 167 aa9.95□□□□□ -0.82
CPSF7-223ENST00000544669 SPENQ96T58 3664 aaKnown RBP9.95□□□□□ -0.82
CPSF7-223ENST00000544669 MGAQ8IWI9 3026 aa9.95□□□□□ -0.82
CPSF7-223ENST00000544669 TRAV40A0A0B4J280 105 aa9.94□□□□□ -0.82
CPSF7-223ENST00000544669 GAGE10A6NGK3 116 aa9.94□□□□□ -0.82
CPSF7-223ENST00000544669 FOXE3Q13461 319 aa9.94□□□□□ -0.82
CPSF7-223ENST00000544669 AMMECR1LQ6DCA0 310 aa9.94□□□□□ -0.82
CPSF7-223ENST00000544669 ADAMTSL5Q6ZMM2 481 aa9.94□□□□□ -0.82
CPSF7-223ENST00000544669 TMEM219Q86XT9 240 aa9.94□□□□□ -0.82
CPSF7-223ENST00000544669 NRACQ8N912 160 aa9.94□□□□□ -0.82
CPSF7-223ENST00000544669 C18orf15Q96N68 181 aa9.94□□□□□ -0.82
CPSF7-223ENST00000544669 C11orf21Q9P2W6 132 aa9.94□□□□□ -0.82
CPSF7-223ENST00000544669 PHLDA3Q9Y5J5 127 aa9.94□□□□□ -0.82
CPSF7-223ENST00000544669 CFAP47Q6ZTR5 3102 aa9.94□□□□□ -0.82
CPSF7-223ENST00000544669 A0A087WX48 190 aa9.93□□□□□ -0.82
CPSF7-223ENST00000544669 SOCS3O14543 225 aa9.93□□□□□ -0.82
CPSF7-223ENST00000544669 ZNF207O43670 478 aaKnown RBP9.93□□□□□ -0.82
CPSF7-223ENST00000544669 FOXC2Q99958 501 aa9.93□□□□□ -0.82
CPSF7-223ENST00000544669 SMIM2Q9BVW6 85 aa9.93□□□□□ -0.82
CPSF7-223ENST00000544669 DAZ1Q9NQZ3 744 aaKnown RBP9.93□□□□□ -0.82
CPSF7-223ENST00000544669 DKK2Q9UBU2 259 aa9.93□□□□□ -0.82
CPSF7-223ENST00000544669 HHLA3Q9XRX5 114 aa9.93□□□□□ -0.82
CPSF7-223ENST00000544669 PTPRZ1P23471 2315 aaPredicted RBP9.93□□□□□ -0.82
CPSF7-223ENST00000544669 IGHV3OR16-13A0A075B7E8 117 aa9.93□□□□□ -0.82
CPSF7-223ENST00000544669 IGHV3-74A0A0B4J1X5 117 aa9.93□□□□□ -0.82
CPSF7-223ENST00000544669 MSMBP08118 114 aa9.93□□□□□ -0.82
CPSF7-223ENST00000544669 PRB4P10163 310 aaPredicted RBP9.93□□□□□ -0.82
CPSF7-223ENST00000544669 GNLYP22749 145 aa9.93□□□□□ -0.82
CPSF7-223ENST00000544669 CDKN1BP46527 198 aa9.93□□□□□ -0.82
CPSF7-223ENST00000544669 OR5A1Q8NGJ0 315 aa9.93□□□□□ -0.82
CPSF7-223ENST00000544669 FAM19A4Q96LR4 140 aa9.93□□□□□ -0.82
CPSF7-223ENST00000544669 DMXL1Q9Y485 3027 aa9.93□□□□□ -0.82
CPSF7-223ENST00000544669 IGHV3-49A0A0A0MS15 119 aa9.92□□□□□ -0.82
CPSF7-223ENST00000544669 B4DSR2 109 aa9.92□□□□□ -0.82
CPSF7-223ENST00000544669 H7C1H1 209 aa9.92□□□□□ -0.82
CPSF7-223ENST00000544669 K7ERU9 68 aa9.92□□□□□ -0.82
CPSF7-223ENST00000544669 IGLV1-40P01703 118 aa9.92□□□□□ -0.82
CPSF7-223ENST00000544669 SMIM13P0DJ93 91 aa9.92□□□□□ -0.82
CPSF7-223ENST00000544669 PF4V1P10720 104 aa9.92□□□□□ -0.82
CPSF7-223ENST00000544669 RPL32P62910 135 aaKnown RBP9.92□□□□□ -0.82
CPSF7-223ENST00000544669 ZFAND2AQ8N6M9 145 aa9.92□□□□□ -0.82
CPSF7-223ENST00000544669 H3BVH4 76 aa9.91□□□□□ -0.82
CPSF7-223ENST00000544669 SUMO2P61956 95 aaKnown RBP9.91□□□□□ -0.82
CPSF7-223ENST00000544669 TLN1Q9Y490 2541 aaKnown RBP9.91□□□□□ -0.82
CPSF7-223ENST00000544669 IGHV4-61A0A0C4DH41 118 aa9.91□□□□□ -0.82
CPSF7-223ENST00000544669 H3BUX3 64 aa9.91□□□□□ -0.82
CPSF7-223ENST00000544669 FXYD7P58549 80 aa9.91□□□□□ -0.82
CPSF7-223ENST00000544669 RPL11P62913 178 aaKnown RBP9.91□□□□□ -0.82
CPSF7-223ENST00000544669 PAPPA-AS1Q5QFB9 102 aa9.91□□□□□ -0.82
CPSF7-223ENST00000544669 Q6ZVH6 145 aa9.91□□□□□ -0.82
CPSF7-223ENST00000544669 GPHB5Q86YW7 130 aa9.91□□□□□ -0.82
CPSF7-223ENST00000544669 ODF3Q96PU9 254 aa9.91□□□□□ -0.82
CPSF7-223ENST00000544669 PIEZO2Q9H5I5 2752 aa9.91□□□□□ -0.82
CPSF7-223ENST00000544669 BOD1L1Q8NFC6 3051 aa9.9□□□□□ -0.82
CPSF7-223ENST00000544669 TPRP12270 2363 aaKnown RBP9.9□□□□□ -0.82
CPSF7-223ENST00000544669 GAGE12BA1L429 117 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms