RNA–Protein interactions for RNA: ENST00000544506.1

LEMD3-205, Transcript of LEM domain containing 3, humanhuman

TSL 5

Gene LEMD3, Length 412 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-205ENST00000544506 CPS1P31327 1500 aa1.13□□□□□ -2.23
LEMD3-205ENST00000544506 ARHGAP5Q13017 1502 aa1.13□□□□□ -2.23
LEMD3-205ENST00000544506 DISP2A7MBM2 1401 aa1.13□□□□□ -2.23
LEMD3-205ENST00000544506 WIZO95785 1651 aa1.13□□□□□ -2.23
LEMD3-205ENST00000544506 CUL7Q14999 1698 aa1.13□□□□□ -2.23
LEMD3-205ENST00000544506 PREX1Q8TCU6 1659 aa1.13□□□□□ -2.23
LEMD3-205ENST00000544506 INTS1Q8N201 2190 aaKnown RBP1.13□□□□□ -2.23
LEMD3-205ENST00000544506 ADGRB2O60241 1585 aa1.13□□□□□ -2.23
LEMD3-205ENST00000544506 ARHGEF5Q12774 1597 aa1.13□□□□□ -2.23
LEMD3-205ENST00000544506 UGGT1Q9NYU2 1555 aa1.13□□□□□ -2.23
LEMD3-205ENST00000544506 NALCNQ8IZF0 1738 aa1.12□□□□□ -2.23
LEMD3-205ENST00000544506 DOCK1Q14185 1865 aa1.12□□□□□ -2.23
LEMD3-205ENST00000544506 PDCD11Q14690 1871 aaKnown RBP1.12□□□□□ -2.23
LEMD3-205ENST00000544506 PLIN4Q96Q06 1357 aa1.12□□□□□ -2.23
LEMD3-205ENST00000544506 TRPM2O94759 1503 aa1.12□□□□□ -2.23
LEMD3-205ENST00000544506 AGLP35573 1532 aa1.12□□□□□ -2.23
LEMD3-205ENST00000544506 PIGBOS1A0A0B4J2F0 54 aa1.12□□□□□ -2.23
LEMD3-205ENST00000544506 A0A1B0GV50 99 aa1.12□□□□□ -2.23
LEMD3-205ENST00000544506 TRDV1A0A1B0GX56 115 aa1.12□□□□□ -2.23
LEMD3-205ENST00000544506 SMIM9A6NGZ8 99 aa1.12□□□□□ -2.23
LEMD3-205ENST00000544506 FAM159BA6NKW6 160 aa1.12□□□□□ -2.23
LEMD3-205ENST00000544506 F8W1H4 67 aa1.12□□□□□ -2.23
LEMD3-205ENST00000544506 GABARAPH6UMI1 98 aa1.12□□□□□ -2.23
LEMD3-205ENST00000544506 J3KT08 172 aa1.12□□□□□ -2.23
LEMD3-205ENST00000544506 LST1O00453 97 aa1.12□□□□□ -2.23
LEMD3-205ENST00000544506 HIST1H2BKO60814 126 aa1.12□□□□□ -2.23
LEMD3-205ENST00000544506 OR7C1O76099 320 aaPredicted RBP1.12□□□□□ -2.23
LEMD3-205ENST00000544506 NDUFC2O95298 119 aa1.12□□□□□ -2.23
LEMD3-205ENST00000544506 CYB5AP00167 134 aa1.12□□□□□ -2.23
LEMD3-205ENST00000544506 PRH1P02810 166 aa1.12□□□□□ -2.23
LEMD3-205ENST00000544506 TRGC2P03986 189 aa1.12□□□□□ -2.23
LEMD3-205ENST00000544506 HIST1H2BJP06899 126 aa1.12□□□□□ -2.23
LEMD3-205ENST00000544506 MSMBP08118 114 aa1.12□□□□□ -2.23
LEMD3-205ENST00000544506 C8orf88P0DMB2 117 aa1.12□□□□□ -2.23
LEMD3-205ENST00000544506 FABP2P12104 132 aa1.12□□□□□ -2.23
LEMD3-205ENST00000544506 HIST1H2BOP23527 126 aa1.12□□□□□ -2.23
LEMD3-205ENST00000544506 RPS12P25398 132 aaKnown RBP1.12□□□□□ -2.23
LEMD3-205ENST00000544506 HIST1H2BBP33778 126 aa1.12□□□□□ -2.23
LEMD3-205ENST00000544506 CSN1S1P47710 185 aa1.12□□□□□ -2.23
LEMD3-205ENST00000544506 POLR2JP52435 117 aaKnown RBP1.12□□□□□ -2.23
LEMD3-205ENST00000544506 HIST1H2BDP58876 126 aa1.12□□□□□ -2.23
LEMD3-205ENST00000544506 SNRPFP62306 86 aaKnown RBP1.12□□□□□ -2.23
LEMD3-205ENST00000544506 RHOBP62745 196 aa1.12□□□□□ -2.23
LEMD3-205ENST00000544506 HIST1H2BCP62807 126 aa1.12□□□□□ -2.23
LEMD3-205ENST00000544506 RPS25P62851 125 aaKnown RBP1.12□□□□□ -2.23
LEMD3-205ENST00000544506 RPS28P62857 69 aaKnown RBP1.12□□□□□ -2.23
LEMD3-205ENST00000544506 SEC11AP67812 179 aa1.12□□□□□ -2.23
LEMD3-205ENST00000544506 TNFAIP6P98066 277 aaPredicted RBP1.12□□□□□ -2.23
LEMD3-205ENST00000544506 HIST1H1AQ02539 215 aaPredicted RBP1.12□□□□□ -2.23
LEMD3-205ENST00000544506 HIST2H2BEQ16778 126 aa1.12□□□□□ -2.23
LEMD3-205ENST00000544506 PSMG4Q5JS54 123 aa1.12□□□□□ -2.23
LEMD3-205ENST00000544506 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.12□□□□□ -2.23
LEMD3-205ENST00000544506 ZCCHC23Q6ZST2 131 aa1.12□□□□□ -2.23
LEMD3-205ENST00000544506 LRRC25Q8N386 305 aaPredicted RBP1.12□□□□□ -2.23
LEMD3-205ENST00000544506 SIGLECL1Q8N7X8 197 aa1.12□□□□□ -2.23
LEMD3-205ENST00000544506 C5orf17Q8NAS9 161 aa1.12□□□□□ -2.23
LEMD3-205ENST00000544506 ST6GALNAC3Q8NDV1 305 aa1.12□□□□□ -2.23
LEMD3-205ENST00000544506 OR52L1Q8NGH7 329 aa1.12□□□□□ -2.23
LEMD3-205ENST00000544506 OR51A4Q8NGJ6 313 aa1.12□□□□□ -2.23
LEMD3-205ENST00000544506 COPS9Q8WXC6 57 aa1.12□□□□□ -2.23
LEMD3-205ENST00000544506 HIST1H2BHQ93079 126 aa1.12□□□□□ -2.23
LEMD3-205ENST00000544506 TSLPQ969D9 159 aa1.12□□□□□ -2.23
LEMD3-205ENST00000544506 RAB37Q96AX2 223 aa1.12□□□□□ -2.23
LEMD3-205ENST00000544506 GPR146Q96CH1 333 aa1.12□□□□□ -2.23
LEMD3-205ENST00000544506 HIST1H2BNQ99877 126 aa1.12□□□□□ -2.23
LEMD3-205ENST00000544506 HIST1H2BMQ99879 126 aa1.12□□□□□ -2.23
LEMD3-205ENST00000544506 GINS3Q9BRX5 216 aa1.12□□□□□ -2.23
LEMD3-205ENST00000544506 SNRNP25Q9BV90 132 aaKnown RBP1.12□□□□□ -2.23
LEMD3-205ENST00000544506 ULBP3Q9BZM4 244 aa1.12□□□□□ -2.23
LEMD3-205ENST00000544506 CST11Q9H112 138 aa1.12□□□□□ -2.23
LEMD3-205ENST00000544506 LPAR5Q9H1C0 372 aa1.12□□□□□ -2.23
LEMD3-205ENST00000544506 MAP1LC3AQ9H492 121 aa1.12□□□□□ -2.23
LEMD3-205ENST00000544506 LRTM1Q9HBL6 345 aa1.12□□□□□ -2.23
LEMD3-205ENST00000544506 ABRACLQ9P1F3 81 aa1.12□□□□□ -2.23
LEMD3-205ENST00000544506 CACFD1Q9UGQ2 172 aa1.12□□□□□ -2.23
LEMD3-205ENST00000544506 SS18L2Q9UHA2 77 aa1.12□□□□□ -2.23
LEMD3-205ENST00000544506 LAMTOR3Q9UHA4 124 aa1.12□□□□□ -2.23
LEMD3-205ENST00000544506 ERG28Q9UKR5 140 aa1.12□□□□□ -2.23
LEMD3-205ENST00000544506 BOKQ9UMX3 212 aaPredicted RBP1.12□□□□□ -2.23
LEMD3-205ENST00000544506 TNFSF18Q9UNG2 199 aa1.12□□□□□ -2.23
LEMD3-205ENST00000544506 PIK3C2AO00443 1686 aa1.12□□□□□ -2.23
LEMD3-205ENST00000544506 KIF1AQ12756 1690 aa1.12□□□□□ -2.23
LEMD3-205ENST00000544506 NWD1Q149M9 1564 aa1.12□□□□□ -2.23
LEMD3-205ENST00000544506 CDC42BPGQ6DT37 1551 aa1.12□□□□□ -2.23
LEMD3-205ENST00000544506 TNRC6AQ8NDV7 1962 aaKnown RBP1.12□□□□□ -2.23
LEMD3-205ENST00000544506 PARP4Q9UKK3 1724 aaKnown RBP1.12□□□□□ -2.23
LEMD3-205ENST00000544506 C1orf167Q5SNV9 1468 aa1.12□□□□□ -2.23
LEMD3-205ENST00000544506 HEATR5AQ86XA9 2040 aa1.11□□□□□ -2.23
LEMD3-205ENST00000544506 MROH1Q8NDA8 1641 aa1.11□□□□□ -2.23
LEMD3-205ENST00000544506 USP32Q8NFA0 1604 aa1.11□□□□□ -2.23
LEMD3-205ENST00000544506 LTN1O94822 1766 aa1.11□□□□□ -2.23
LEMD3-205ENST00000544506 ANKRD36CQ5JPF3 1778 aa1.11□□□□□ -2.23
LEMD3-205ENST00000544506 ROBO3Q96MS0 1386 aa1.11□□□□□ -2.23
LEMD3-205ENST00000544506 DLC1Q96QB1 1528 aa1.11□□□□□ -2.23
LEMD3-205ENST00000544506 ZNF142P52746 1687 aaPredicted RBP1.11□□□□□ -2.23
LEMD3-205ENST00000544506 CLTCQ00610 1675 aaKnown RBP1.11□□□□□ -2.23
LEMD3-205ENST00000544506 SHPRHQ149N8 1683 aa1.11□□□□□ -2.23
LEMD3-205ENST00000544506 DOCK2Q92608 1830 aa1.11□□□□□ -2.23
LEMD3-205ENST00000544506 TRAV9-1A0A075B6T8 112 aa1.11□□□□□ -2.23
LEMD3-205ENST00000544506 TRAV36DV7A0A075B6V5 113 aa1.11□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 170.5 ms