RNA–Protein interactions for RNA: ENST00000542495.5

ATPAF1-212, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-212ENST00000542495 MCRIP2Q9BUT9 160 aaKnown RBP4.02□□□□□ -1.77
ATPAF1-212ENST00000542495 DOPEY2Q9Y3R5 2298 aa4.01□□□□□ -1.77
ATPAF1-212ENST00000542495 TLN1Q9Y490 2541 aaKnown RBP4.01□□□□□ -1.77
ATPAF1-212ENST00000542495 COL12A1Q99715 3063 aa4.01□□□□□ -1.77
ATPAF1-212ENST00000542495 TMSB15BA0A087X1C1 80 aa4.01□□□□□ -1.77
ATPAF1-212ENST00000542495 A0A1W2PRD5 423 aa4.01□□□□□ -1.77
ATPAF1-212ENST00000542495 A0A1W2PRF3 423 aa4.01□□□□□ -1.77
ATPAF1-212ENST00000542495 A0A1W2PRM7 423 aa4.01□□□□□ -1.77
ATPAF1-212ENST00000542495 CLPSL1A2RUU4 121 aa4.01□□□□□ -1.77
ATPAF1-212ENST00000542495 NCBP2LA6PVI3 153 aaKnown RBP4.01□□□□□ -1.77
ATPAF1-212ENST00000542495 BUB3O43684 328 aa4.01□□□□□ -1.77
ATPAF1-212ENST00000542495 CD5LO43866 347 aa4.01□□□□□ -1.77
ATPAF1-212ENST00000542495 IGHV3-23P01764 117 aa4.01□□□□□ -1.77
ATPAF1-212ENST00000542495 GPR183P32249 361 aa4.01□□□□□ -1.77
ATPAF1-212ENST00000542495 RAB9AP51151 201 aa4.01□□□□□ -1.77
ATPAF1-212ENST00000542495 KLRB1Q12918 225 aa4.01□□□□□ -1.77
ATPAF1-212ENST00000542495 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.01□□□□□ -1.77
ATPAF1-212ENST00000542495 FER1L6-AS1Q8NA97 138 aa4.01□□□□□ -1.77
ATPAF1-212ENST00000542495 RNF185Q96GF1 192 aa4.01□□□□□ -1.77
ATPAF1-212ENST00000542495 TPPP3Q9BW30 176 aa4.01□□□□□ -1.77
ATPAF1-212ENST00000542495 CBY1Q9Y3M2 126 aa4.01□□□□□ -1.77
ATPAF1-212ENST00000542495 PTPN13Q12923 2485 aa4□□□□□ -1.77
ATPAF1-212ENST00000542495 ARHGAP32A7KAX9 2087 aa4□□□□□ -1.77
ATPAF1-212ENST00000542495 MUC21A0A0G2JKD1 596 aa4□□□□□ -1.77
ATPAF1-212ENST00000542495 MUC21A0A140T8X8 626 aa4□□□□□ -1.77
ATPAF1-212ENST00000542495 FABP5P3A8MUU1 101 aa4□□□□□ -1.77
ATPAF1-212ENST00000542495 PRAC2D3DTV9 90 aa4□□□□□ -1.77
ATPAF1-212ENST00000542495 NPYP01303 97 aa4□□□□□ -1.77
ATPAF1-212ENST00000542495 HBDP02042 147 aa4□□□□□ -1.77
ATPAF1-212ENST00000542495 PPBPP02775 128 aa4□□□□□ -1.77
ATPAF1-212ENST00000542495 HLA-DMBP28068 263 aa4□□□□□ -1.77
ATPAF1-212ENST00000542495 UBE2E1P51965 193 aa4□□□□□ -1.77
ATPAF1-212ENST00000542495 FOXE3Q13461 319 aa4□□□□□ -1.77
ATPAF1-212ENST00000542495 MUC21Q5SSG8 566 aa4□□□□□ -1.77
ATPAF1-212ENST00000542495 BOD1L2Q8IYS8 172 aa4□□□□□ -1.77
ATPAF1-212ENST00000542495 Q8TAT8 98 aa4□□□□□ -1.77
ATPAF1-212ENST00000542495 PIFOQ8TCI5 191 aa4□□□□□ -1.77
ATPAF1-212ENST00000542495 MRPL53Q96EL3 112 aaKnown RBP4□□□□□ -1.77
ATPAF1-212ENST00000542495 ADGRG4Q8IZF6 3080 aa4□□□□□ -1.77
ATPAF1-212ENST00000542495 A0A087WWL8 130 aa3.99□□□□□ -1.77
ATPAF1-212ENST00000542495 LOC389332A0A1B0GUA5 103 aa3.99□□□□□ -1.77
ATPAF1-212ENST00000542495 A0A1W2PPR1 153 aa3.99□□□□□ -1.77
ATPAF1-212ENST00000542495 H0Y8G0 127 aa3.99□□□□□ -1.77
ATPAF1-212ENST00000542495 SIVA1O15304 175 aa3.99□□□□□ -1.77
ATPAF1-212ENST00000542495 NDUFS7O75251 213 aa3.99□□□□□ -1.77
ATPAF1-212ENST00000542495 CKS2P33552 79 aa3.99□□□□□ -1.77
ATPAF1-212ENST00000542495 RBX1P62877 108 aa3.99□□□□□ -1.77
ATPAF1-212ENST00000542495 TWIST1Q15672 202 aa3.99□□□□□ -1.77
ATPAF1-212ENST00000542495 C15orf32Q32M92 178 aa3.99□□□□□ -1.77
ATPAF1-212ENST00000542495 IGFL4Q6B9Z1 124 aa3.99□□□□□ -1.77
ATPAF1-212ENST00000542495 RNASE8Q8TDE3 154 aaKnown RBP3.99□□□□□ -1.77
ATPAF1-212ENST00000542495 IFI27L1Q96BM0 104 aa3.99□□□□□ -1.77
ATPAF1-212ENST00000542495 ATP6V0BQ99437 205 aa3.99□□□□□ -1.77
ATPAF1-212ENST00000542495 SLC50A1Q9BRV3 221 aa3.99□□□□□ -1.77
ATPAF1-212ENST00000542495 ANKHD1Q8IWZ3 2542 aaKnown RBP3.99□□□□□ -1.77
ATPAF1-212ENST00000542495 RELNP78509 3460 aa3.99□□□□□ -1.77
ATPAF1-212ENST00000542495 TRAV8-2A0A0B4J237 113 aa3.99□□□□□ -1.77
ATPAF1-212ENST00000542495 IGKV3D-20A0A0C4DH25 116 aa3.99□□□□□ -1.77
ATPAF1-212ENST00000542495 CENPVL3A0A0U1RRI6 287 aa3.99□□□□□ -1.77
ATPAF1-212ENST00000542495 SMKR1H3BMG3 65 aa3.99□□□□□ -1.77
ATPAF1-212ENST00000542495 ATP6V0E1O15342 81 aa3.99□□□□□ -1.77
ATPAF1-212ENST00000542495 GOSR1O95249 250 aa3.99□□□□□ -1.77
ATPAF1-212ENST00000542495 CLEC3BP05452 202 aa3.99□□□□□ -1.77
ATPAF1-212ENST00000542495 LMO4P61968 165 aa3.99□□□□□ -1.77
ATPAF1-212ENST00000542495 CACNG7P62955 275 aa3.99□□□□□ -1.77
ATPAF1-212ENST00000542495 SEC11AP67812 179 aa3.99□□□□□ -1.77
ATPAF1-212ENST00000542495 ERCC8Q13216 396 aa3.99□□□□□ -1.77
ATPAF1-212ENST00000542495 TMEM97Q5BJF2 176 aa3.99□□□□□ -1.77
ATPAF1-212ENST00000542495 PSMG4Q5JS54 123 aa3.99□□□□□ -1.77
ATPAF1-212ENST00000542495 OR8A1Q8NGG7 326 aa3.99□□□□□ -1.77
ATPAF1-212ENST00000542495 OR9G4Q8NGQ1 327 aa3.99□□□□□ -1.77
ATPAF1-212ENST00000542495 AGPAT4-IT1Q9H0P7 198 aa3.99□□□□□ -1.77
ATPAF1-212ENST00000542495 MAP1LC3AQ9H492 121 aa3.99□□□□□ -1.77
ATPAF1-212ENST00000542495 HIF1ANQ9NWT6 349 aa3.99□□□□□ -1.77
ATPAF1-212ENST00000542495 MSRB1Q9NZV6 116 aa3.99□□□□□ -1.77
ATPAF1-212ENST00000542495 TIMM8BQ9Y5J9 83 aaPredicted RBP3.99□□□□□ -1.77
ATPAF1-212ENST00000542495 IGLV2-18A0A075B6J9 118 aa3.98□□□□□ -1.77
ATPAF1-212ENST00000542495 IGHV4-4A0A075B6R2 117 aa3.98□□□□□ -1.77
ATPAF1-212ENST00000542495 TRBV7-1A0A0A6YYK4 115 aa3.98□□□□□ -1.77
ATPAF1-212ENST00000542495 CBY3A6NI87 242 aa3.98□□□□□ -1.77
ATPAF1-212ENST00000542495 GAS8-AS1O95177 125 aa3.98□□□□□ -1.77
ATPAF1-212ENST00000542495 ORM1P02763 201 aa3.98□□□□□ -1.77
ATPAF1-212ENST00000542495 RNASE1P07998 156 aaKnown RBP3.98□□□□□ -1.77
ATPAF1-212ENST00000542495 FCER1GP30273 86 aa3.98□□□□□ -1.77
ATPAF1-212ENST00000542495 SAA4P35542 130 aa3.98□□□□□ -1.77
ATPAF1-212ENST00000542495 CDKN1BP46527 198 aa3.98□□□□□ -1.77
ATPAF1-212ENST00000542495 EFNA4P52798 201 aa3.98□□□□□ -1.77
ATPAF1-212ENST00000542495 CRIP2P52943 208 aaPredicted RBP3.98□□□□□ -1.77
ATPAF1-212ENST00000542495 VAMP3Q15836 100 aa3.98□□□□□ -1.77
ATPAF1-212ENST00000542495 PRSS57Q6UWY2 283 aa3.98□□□□□ -1.77
ATPAF1-212ENST00000542495 ADAMTSL5Q6ZMM2 481 aa3.98□□□□□ -1.77
ATPAF1-212ENST00000542495 C9orf47Q6ZRZ4 202 aa3.98□□□□□ -1.77
ATPAF1-212ENST00000542495 IL17RELQ6ZVW7 336 aa3.98□□□□□ -1.77
ATPAF1-212ENST00000542495 OR4C5Q8NGB2 326 aa3.98□□□□□ -1.77
ATPAF1-212ENST00000542495 NXT2Q9NPJ8 142 aaKnown RBP3.98□□□□□ -1.77
ATPAF1-212ENST00000542495 C11orf21Q9P2W6 132 aa3.98□□□□□ -1.77
ATPAF1-212ENST00000542495 FLNCQ14315 2725 aa3.98□□□□□ -1.77
ATPAF1-212ENST00000542495 NBASA2RRP1 2371 aa3.98□□□□□ -1.77
ATPAF1-212ENST00000542495 IGHV3OR16-8A0A075B7F1 116 aa3.97□□□□□ -1.77
ATPAF1-212ENST00000542495 IGHV3-35A0A0C4DH35 117 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 96 ms