RNA–Protein interactions for RNA: ENST00000538280.1

DDB1-211, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 227 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-211ENST00000538280 PPIFP30405 207 aaKnown RBP7.09□□□□□ -1.27
DDB1-211ENST00000538280 LINC01559Q495D7 138 aa7.09□□□□□ -1.27
DDB1-211ENST00000538280 FAM104BQ5XKR9 115 aa7.09□□□□□ -1.27
DDB1-211ENST00000538280 PRSS57Q6UWY2 283 aa7.09□□□□□ -1.27
DDB1-211ENST00000538280 ZNF705AQ6ZN79 300 aaPredicted RBP7.09□□□□□ -1.27
DDB1-211ENST00000538280 KLHDC1Q8N7A1 406 aa7.09□□□□□ -1.27
DDB1-211ENST00000538280 Q8TAT8 98 aa7.09□□□□□ -1.27
DDB1-211ENST00000538280 GLMPQ8WWB7 406 aa7.09□□□□□ -1.27
DDB1-211ENST00000538280 CLEC5AQ9NY25 188 aa7.09□□□□□ -1.27
DDB1-211ENST00000538280 ZNF580Q9UK33 172 aa7.09□□□□□ -1.27
DDB1-211ENST00000538280 ABCA1O95477 2261 aa7.08□□□□□ -1.28
DDB1-211ENST00000538280 NBEAL1Q6ZS30 2694 aa7.08□□□□□ -1.28
DDB1-211ENST00000538280 IGHV4-30-2A0A087WSY4 118 aa7.08□□□□□ -1.28
DDB1-211ENST00000538280 IGHV3-35A0A0C4DH35 117 aa7.08□□□□□ -1.28
DDB1-211ENST00000538280 TMEM213A2RRL7 107 aa7.08□□□□□ -1.28
DDB1-211ENST00000538280 RNF223E7ERA6 249 aa7.08□□□□□ -1.28
DDB1-211ENST00000538280 SYS1-DBNDD2H3BUS1 97 aa7.08□□□□□ -1.28
DDB1-211ENST00000538280 LEPROTL1O95214 131 aa7.08□□□□□ -1.28
DDB1-211ENST00000538280 IGHV4-38-2P0DP08 117 aa7.08□□□□□ -1.28
DDB1-211ENST00000538280 PRB4P10163 310 aaPredicted RBP7.08□□□□□ -1.28
DDB1-211ENST00000538280 IGFL4Q6B9Z1 124 aa7.08□□□□□ -1.28
DDB1-211ENST00000538280 CLEC2AQ6UVW9 174 aa7.08□□□□□ -1.28
DDB1-211ENST00000538280 LINC00173Q6ZV60 143 aa7.08□□□□□ -1.28
DDB1-211ENST00000538280 TMEM219Q86XT9 240 aa7.08□□□□□ -1.28
DDB1-211ENST00000538280 FER1L6-AS1Q8NA97 138 aa7.08□□□□□ -1.28
DDB1-211ENST00000538280 METTL26Q96S19 204 aa7.08□□□□□ -1.28
DDB1-211ENST00000538280 IGHV3OR16-8A0A075B7F1 116 aa7.07□□□□□ -1.28
DDB1-211ENST00000538280 FABP5P3A8MUU1 101 aa7.07□□□□□ -1.28
DDB1-211ENST00000538280 NDUFA4O00483 81 aa7.07□□□□□ -1.28
DDB1-211ENST00000538280 MSMBP08118 114 aa7.07□□□□□ -1.28
DDB1-211ENST00000538280 HIST1H1AQ02539 215 aaPredicted RBP7.07□□□□□ -1.28
DDB1-211ENST00000538280 ERCC8Q13216 396 aa7.07□□□□□ -1.28
DDB1-211ENST00000538280 MRPL51Q4U2R6 128 aaKnown RBP7.07□□□□□ -1.28
DDB1-211ENST00000538280 PET117Q6UWS5 81 aa7.07□□□□□ -1.28
DDB1-211ENST00000538280 BRD3OSQ6XYD6 125 aa7.07□□□□□ -1.28
DDB1-211ENST00000538280 C9orf47Q6ZRZ4 202 aa7.07□□□□□ -1.28
DDB1-211ENST00000538280 C8orf86Q6ZUL3 223 aa7.07□□□□□ -1.28
DDB1-211ENST00000538280 USMG5Q96IX5 58 aa7.07□□□□□ -1.28
DDB1-211ENST00000538280 NPFFR1Q9GZQ6 430 aa7.07□□□□□ -1.28
DDB1-211ENST00000538280 TMEM191AQ9H0A3 160 aa7.07□□□□□ -1.28
DDB1-211ENST00000538280 AGPAT4-IT1Q9H0P7 198 aa7.07□□□□□ -1.28
DDB1-211ENST00000538280 IGHV3OR16-10A0A075B7F0 116 aa7.06□□□□□ -1.28
DDB1-211ENST00000538280 TMSB15BA0A087X1C1 80 aa7.06□□□□□ -1.28
DDB1-211ENST00000538280 A0A096LNJ9 63 aa7.06□□□□□ -1.28
DDB1-211ENST00000538280 LINC01546A6NGU7 62 aa7.06□□□□□ -1.28
DDB1-211ENST00000538280 OR4C46A6NHA9 309 aa7.06□□□□□ -1.28
DDB1-211ENST00000538280 SOCS3O14543 225 aa7.06□□□□□ -1.28
DDB1-211ENST00000538280 TRGV3P03979 118 aa7.06□□□□□ -1.28
DDB1-211ENST00000538280 ARL3P36405 182 aa7.06□□□□□ -1.28
DDB1-211ENST00000538280 ZNF138P52744 262 aa7.06□□□□□ -1.28
DDB1-211ENST00000538280 ATP5J2P56134 94 aa7.06□□□□□ -1.28
DDB1-211ENST00000538280 DSCR9P59020 149 aa7.06□□□□□ -1.28
DDB1-211ENST00000538280 CFHR3Q02985 330 aa7.06□□□□□ -1.28
DDB1-211ENST00000538280 C9orf139Q6ZV77 190 aa7.06□□□□□ -1.28
DDB1-211ENST00000538280 AMN1Q8IY45 258 aa7.06□□□□□ -1.28
DDB1-211ENST00000538280 ORMDL3Q8N138 153 aa7.06□□□□□ -1.28
DDB1-211ENST00000538280 RNF185Q96GF1 192 aa7.06□□□□□ -1.28
DDB1-211ENST00000538280 AP5S1Q9NUS5 200 aa7.06□□□□□ -1.28
DDB1-211ENST00000538280 HSPB8Q9UJY1 196 aa7.06□□□□□ -1.28
DDB1-211ENST00000538280 MRPS16Q9Y3D3 137 aaKnown RBP7.06□□□□□ -1.28
DDB1-211ENST00000538280 LENEPQ9Y5L5 61 aa7.06□□□□□ -1.28
DDB1-211ENST00000538280 D6R8Y8 96 aa7.05□□□□□ -1.28
DDB1-211ENST00000538280 H3BUX3 64 aa7.05□□□□□ -1.28
DDB1-211ENST00000538280 IGLV1-40P01703 118 aa7.05□□□□□ -1.28
DDB1-211ENST00000538280 RPLP1P05386 114 aaKnown RBP7.05□□□□□ -1.28
DDB1-211ENST00000538280 IGLL1P15814 213 aa7.05□□□□□ -1.28
DDB1-211ENST00000538280 MAJINQ3KP22 176 aa7.05□□□□□ -1.28
DDB1-211ENST00000538280 KRTAP24-1Q3LI83 254 aa7.05□□□□□ -1.28
DDB1-211ENST00000538280 LINC01545Q5VT33 79 aa7.05□□□□□ -1.28
DDB1-211ENST00000538280 IL17RELQ6ZVW7 336 aa7.05□□□□□ -1.28
DDB1-211ENST00000538280 FA2HQ7L5A8 372 aa7.05□□□□□ -1.28
DDB1-211ENST00000538280 GPHB5Q86YW7 130 aa7.05□□□□□ -1.28
DDB1-211ENST00000538280 ATOH7Q8N100 152 aa7.05□□□□□ -1.28
DDB1-211ENST00000538280 RNF182Q8N6D2 247 aa7.05□□□□□ -1.28
DDB1-211ENST00000538280 PRELID3AQ96N28 172 aa7.05□□□□□ -1.28
DDB1-211ENST00000538280 ZNF747Q9BV97 191 aa7.05□□□□□ -1.28
DDB1-211ENST00000538280 MAP1LC3CQ9BXW4 147 aa7.05□□□□□ -1.28
DDB1-211ENST00000538280 ST20Q9HBF5 79 aa7.05□□□□□ -1.28
DDB1-211ENST00000538280 SIGLEC8Q9NYZ4 499 aa7.05□□□□□ -1.28
DDB1-211ENST00000538280 IGHV4-4A0A075B6R2 117 aa7.04□□□□□ -1.28
DDB1-211ENST00000538280 A0A096LNT2 108 aa7.04□□□□□ -1.28
DDB1-211ENST00000538280 IGKV3D-20A0A0C4DH25 116 aa7.04□□□□□ -1.28
DDB1-211ENST00000538280 IGHV3-66A0A0C4DH42 116 aa7.04□□□□□ -1.28
DDB1-211ENST00000538280 TCAPO15273 167 aa7.04□□□□□ -1.28
DDB1-211ENST00000538280 SNAI2O43623 268 aa7.04□□□□□ -1.28
DDB1-211ENST00000538280 CSN3P07498 182 aa7.04□□□□□ -1.28
DDB1-211ENST00000538280 SLC25A16P16260 332 aa7.04□□□□□ -1.28
DDB1-211ENST00000538280 GATA3P23771 443 aa7.04□□□□□ -1.28
DDB1-211ENST00000538280 HNRNPA3P51991 378 aaKnown RBP7.04□□□□□ -1.28
DDB1-211ENST00000538280 OR10AG1Q8NH19 301 aa7.04□□□□□ -1.28
DDB1-211ENST00000538280 TPPP3Q9BW30 176 aa7.04□□□□□ -1.28
DDB1-211ENST00000538280 C11orf21Q9P2W6 132 aa7.04□□□□□ -1.28
DDB1-211ENST00000538280 LINC00527Q9UJ94 153 aa7.04□□□□□ -1.28
DDB1-211ENST00000538280 LAMTOR2Q9Y2Q5 125 aa7.04□□□□□ -1.28
DDB1-211ENST00000538280 IGHV7-4-1A0A0J9YVY3 117 aa7.03□□□□□ -1.28
DDB1-211ENST00000538280 B4DSR2 109 aa7.03□□□□□ -1.28
DDB1-211ENST00000538280 ZNF207O43670 478 aaKnown RBP7.03□□□□□ -1.28
DDB1-211ENST00000538280 AVPP01185 164 aa7.03□□□□□ -1.28
DDB1-211ENST00000538280 NPYP01303 97 aa7.03□□□□□ -1.28
DDB1-211ENST00000538280 TRBV12-3P01733 135 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms