RNA–Protein interactions for RNA: ENST00000530253.5

CCDC90B-217, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 776 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-217ENST00000530253 YTHDF2Q9Y5A9 579 aaKnown RBP6.35□□□□□ -1.39
CCDC90B-217ENST00000530253 DYNC2H1Q8NCM8 4307 aaKnown RBP6.34□□□□□ -1.39
CCDC90B-217ENST00000530253 IGKV2-40A0A087WW87 121 aaPredicted RBP6.34□□□□□ -1.39
CCDC90B-217ENST00000530253 TRAV1-1A0A0B4J248 108 aa6.34□□□□□ -1.39
CCDC90B-217ENST00000530253 IGKV2D-40P01614 121 aaPredicted RBP6.34□□□□□ -1.39
CCDC90B-217ENST00000530253 APOC4P55056 127 aa6.34□□□□□ -1.39
CCDC90B-217ENST00000530253 HIST1H1AQ02539 215 aaPredicted RBP6.34□□□□□ -1.39
CCDC90B-217ENST00000530253 EBLN2Q6P2I7 272 aa6.34□□□□□ -1.39
CCDC90B-217ENST00000530253 MORN3Q6PF18 240 aaPredicted RBP6.34□□□□□ -1.39
CCDC90B-217ENST00000530253 SFT2D1Q8WV19 159 aa6.34□□□□□ -1.39
CCDC90B-217ENST00000530253 CSTL1Q9H114 145 aa6.34□□□□□ -1.39
CCDC90B-217ENST00000530253 SLC35B3Q9H1N7 401 aa6.34□□□□□ -1.39
CCDC90B-217ENST00000530253 AAMDCQ9H7C9 122 aa6.34□□□□□ -1.39
CCDC90B-217ENST00000530253 RETNQ9HD89 108 aa6.34□□□□□ -1.39
CCDC90B-217ENST00000530253 AGRNO00468 2067 aa6.34□□□□□ -1.4
CCDC90B-217ENST00000530253 A0A1W2PRE2 83 aa6.33□□□□□ -1.4
CCDC90B-217ENST00000530253 PGPA6NDG6 321 aa6.33□□□□□ -1.4
CCDC90B-217ENST00000530253 FAM74A7A6NL05 159 aa6.33□□□□□ -1.4
CCDC90B-217ENST00000530253 UBE2CO00762 179 aa6.33□□□□□ -1.4
CCDC90B-217ENST00000530253 CRXO43186 299 aaPredicted RBP6.33□□□□□ -1.4
CCDC90B-217ENST00000530253 DUSP14O95147 198 aaKnown RBP6.33□□□□□ -1.4
CCDC90B-217ENST00000530253 CA1P00915 261 aaPredicted RBP6.33□□□□□ -1.4
CCDC90B-217ENST00000530253 IGKV3-20P01619 116 aa6.33□□□□□ -1.4
CCDC90B-217ENST00000530253 GNG5P63218 68 aa6.33□□□□□ -1.4
CCDC90B-217ENST00000530253 CCL20P78556 96 aa6.33□□□□□ -1.4
CCDC90B-217ENST00000530253 GFI1BQ5VTD9 330 aa6.33□□□□□ -1.4
CCDC90B-217ENST00000530253 ARL6IP6Q8N6S5 226 aa6.33□□□□□ -1.4
CCDC90B-217ENST00000530253 CSNK1G2-AS1Q8NCQ2 148 aa6.33□□□□□ -1.4
CCDC90B-217ENST00000530253 OR4B1Q8NGF8 309 aa6.33□□□□□ -1.4
CCDC90B-217ENST00000530253 FAM19A4Q96LR4 140 aa6.33□□□□□ -1.4
CCDC90B-217ENST00000530253 ARL2-SNX15V9GYD0 113 aa6.33□□□□□ -1.4
CCDC90B-217ENST00000530253 KMT2CQ8NEZ4 4911 aaKnown RBP6.33□□□□□ -1.4
CCDC90B-217ENST00000530253 A0A1B0GV50 99 aa6.32□□□□□ -1.4
CCDC90B-217ENST00000530253 RBAKDNA6NC62 111 aa6.32□□□□□ -1.4
CCDC90B-217ENST00000530253 CT45A10P0DMU9 189 aa6.32□□□□□ -1.4
CCDC90B-217ENST00000530253 UBE2G2P60604 165 aa6.32□□□□□ -1.4
CCDC90B-217ENST00000530253 ERCC8Q13216 396 aa6.32□□□□□ -1.4
CCDC90B-217ENST00000530253 DEFB135Q30KP9 77 aa6.32□□□□□ -1.4
CCDC90B-217ENST00000530253 CCDC28AQ8IWP9 274 aa6.32□□□□□ -1.4
CCDC90B-217ENST00000530253 IQCF2Q8IXL9 164 aa6.32□□□□□ -1.4
CCDC90B-217ENST00000530253 C5orf17Q8NAS9 161 aa6.32□□□□□ -1.4
CCDC90B-217ENST00000530253 LYPD6BQ8NI32 183 aa6.32□□□□□ -1.4
CCDC90B-217ENST00000530253 RNF183Q96D59 192 aa6.32□□□□□ -1.4
CCDC90B-217ENST00000530253 ODF3Q96PU9 254 aa6.32□□□□□ -1.4
CCDC90B-217ENST00000530253 VGLL1Q99990 258 aa6.32□□□□□ -1.4
CCDC90B-217ENST00000530253 OVOL2Q9BRP0 275 aa6.32□□□□□ -1.4
CCDC90B-217ENST00000530253 AGPAT4-IT1Q9H0P7 198 aa6.32□□□□□ -1.4
CCDC90B-217ENST00000530253 TP53TG1Q9Y2A0 90 aa6.32□□□□□ -1.4
CCDC90B-217ENST00000530253 PRSS47A8MTI9 375 aa6.31□□□□□ -1.4
CCDC90B-217ENST00000530253 ZNF705EA8MWA4 302 aaPredicted RBP6.31□□□□□ -1.4
CCDC90B-217ENST00000530253 M0R2Z0 102 aa6.31□□□□□ -1.4
CCDC90B-217ENST00000530253 TCRAP04437 139 aa6.31□□□□□ -1.4
CCDC90B-217ENST00000530253 SLC25A5P05141 298 aaKnown RBP6.31□□□□□ -1.4
CCDC90B-217ENST00000530253 RBMY1A1P0DJD3 496 aaKnown RBP6.31□□□□□ -1.4
CCDC90B-217ENST00000530253 RBMY1CP0DJD4 496 aa6.31□□□□□ -1.4
CCDC90B-217ENST00000530253 ATP5G3P48201 142 aa6.31□□□□□ -1.4
CCDC90B-217ENST00000530253 FXYD7P58549 80 aa6.31□□□□□ -1.4
CCDC90B-217ENST00000530253 PMS2P11Q13670 270 aa6.31□□□□□ -1.4
CCDC90B-217ENST00000530253 RBMY1FQ15415 496 aaKnown RBP6.31□□□□□ -1.4
CCDC90B-217ENST00000530253 SPINK13Q1W4C9 94 aa6.31□□□□□ -1.4
CCDC90B-217ENST00000530253 TEX261Q6UWH6 196 aa6.31□□□□□ -1.4
CCDC90B-217ENST00000530253 OR10J6PQ8NGY7 276 aa6.31□□□□□ -1.4
CCDC90B-217ENST00000530253 Q8TAT8 98 aa6.31□□□□□ -1.4
CCDC90B-217ENST00000530253 RXFP4Q8TDU9 374 aa6.31□□□□□ -1.4
CCDC90B-217ENST00000530253 STARD9Q9P2P6 4700 aa6.31□□□□□ -1.4
CCDC90B-217ENST00000530253 TRAV8-1A0A0A6YYK1 113 aa6.3□□□□□ -1.4
CCDC90B-217ENST00000530253 PAGE4O60829 102 aa6.3□□□□□ -1.4
CCDC90B-217ENST00000530253 IGLV2-11P01706 119 aa6.3□□□□□ -1.4
CCDC90B-217ENST00000530253 HBE1P02100 147 aa6.3□□□□□ -1.4
CCDC90B-217ENST00000530253 AMBPP02760 352 aa6.3□□□□□ -1.4
CCDC90B-217ENST00000530253 CRISP2P16562 243 aa6.3□□□□□ -1.4
CCDC90B-217ENST00000530253 CSN1S1P47710 185 aa6.3□□□□□ -1.4
CCDC90B-217ENST00000530253 ZNF138P52744 262 aa6.3□□□□□ -1.4
CCDC90B-217ENST00000530253 PRR9Q5T870 116 aa6.3□□□□□ -1.4
CCDC90B-217ENST00000530253 ZNF705AQ6ZN79 300 aaPredicted RBP6.3□□□□□ -1.4
CCDC90B-217ENST00000530253 GOLT1AQ6ZVE7 132 aa6.3□□□□□ -1.4
CCDC90B-217ENST00000530253 C1orf158Q8N1D5 194 aa6.3□□□□□ -1.4
CCDC90B-217ENST00000530253 ZFAND2AQ8N6M9 145 aa6.3□□□□□ -1.4
CCDC90B-217ENST00000530253 ZNF680Q8NEM1 530 aa6.3□□□□□ -1.4
CCDC90B-217ENST00000530253 CMTM2Q8TAZ6 248 aa6.3□□□□□ -1.4
CCDC90B-217ENST00000530253 IGF2BP2-AS1Q96M15 143 aa6.3□□□□□ -1.4
CCDC90B-217ENST00000530253 LINC00477Q96M19 166 aa6.3□□□□□ -1.4
CCDC90B-217ENST00000530253 RCHY1Q96PM5 261 aa6.3□□□□□ -1.4
CCDC90B-217ENST00000530253 PPP1R14DQ9NXH3 145 aa6.3□□□□□ -1.4
CCDC90B-217ENST00000530253 ZNF492Q9P255 531 aa6.3□□□□□ -1.4
CCDC90B-217ENST00000530253 XCL2Q9UBD3 114 aa6.3□□□□□ -1.4
CCDC90B-217ENST00000530253 EPDR1Q9UM22 224 aa6.3□□□□□ -1.4
CCDC90B-217ENST00000530253 RPH3ALQ9UNE2 315 aa6.3□□□□□ -1.4
CCDC90B-217ENST00000530253 PLECQ15149 4684 aaKnown RBP6.29□□□□□ -1.4
CCDC90B-217ENST00000530253 TRAV12-2A0A075B6T6 113 aa6.29□□□□□ -1.4
CCDC90B-217ENST00000530253 TRBV7-9A0A0J9YWB2 115 aa6.29□□□□□ -1.4
CCDC90B-217ENST00000530253 SERTM2A0A1B0GWG4 89 aa6.29□□□□□ -1.4
CCDC90B-217ENST00000530253 IFITM10A6NMD0 228 aa6.29□□□□□ -1.4
CCDC90B-217ENST00000530253 KLLNB2CW77 178 aa6.29□□□□□ -1.4
CCDC90B-217ENST00000530253 PEX7O00628 323 aa6.29□□□□□ -1.4
CCDC90B-217ENST00000530253 CDKN1BP46527 198 aa6.29□□□□□ -1.4
CCDC90B-217ENST00000530253 PPT1P50897 306 aa6.29□□□□□ -1.4
CCDC90B-217ENST00000530253 NUTF2P61970 127 aaKnown RBP6.29□□□□□ -1.4
CCDC90B-217ENST00000530253 IFITM2Q01629 132 aa6.29□□□□□ -1.4
CCDC90B-217ENST00000530253 CYB561D1Q8N8Q1 229 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms