RNA–Protein interactions for RNA: ENST00000528165.5

CAPN1-214, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 2,828 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-214ENST00000528165 SYT8Q8NBV8 401 aa11.34□□□□□ -0.59
CAPN1-214ENST00000528165 GEMIN7Q9H840 131 aaKnown RBP11.34□□□□□ -0.59
CAPN1-214ENST00000528165 PRSS47A8MTI9 375 aa11.33□□□□□ -0.6
CAPN1-214ENST00000528165 MORN3Q6PF18 240 aaPredicted RBP11.33□□□□□ -0.6
CAPN1-214ENST00000528165 IGHV3OR16-8A0A075B7F1 116 aa11.33□□□□□ -0.6
CAPN1-214ENST00000528165 IGKV3D-20A0A0C4DH25 116 aa11.33□□□□□ -0.6
CAPN1-214ENST00000528165 PRAC2D3DTV9 90 aa11.33□□□□□ -0.6
CAPN1-214ENST00000528165 HES1Q14469 280 aa11.33□□□□□ -0.6
CAPN1-214ENST00000528165 ONECUT1Q9UBC0 465 aa11.33□□□□□ -0.6
CAPN1-214ENST00000528165 CEP250Q9BV73 2442 aa11.33□□□□□ -0.6
CAPN1-214ENST00000528165 TRAV12-1A0A0B4J245 112 aa11.32□□□□□ -0.6
CAPN1-214ENST00000528165 C8orf86Q6ZUL3 223 aa11.32□□□□□ -0.6
CAPN1-214ENST00000528165 ATP6V0E2Q8NHE4 81 aa11.32□□□□□ -0.6
CAPN1-214ENST00000528165 FAM57AQ8TBR7 257 aa11.32□□□□□ -0.6
CAPN1-214ENST00000528165 DLX4Q92988 240 aaPredicted RBP11.32□□□□□ -0.6
CAPN1-214ENST00000528165 ZNF672Q499Z4 452 aaPredicted RBP11.32□□□□□ -0.6
CAPN1-214ENST00000528165 CFAP126Q5VTH2 177 aa11.32□□□□□ -0.6
CAPN1-214ENST00000528165 C5orf64Q2M2E5 130 aa11.31□□□□□ -0.6
CAPN1-214ENST00000528165 Q6ZS92 163 aa11.31□□□□□ -0.6
CAPN1-214ENST00000528165 NPBQ8NG41 125 aa11.31□□□□□ -0.6
CAPN1-214ENST00000528165 WFDC12Q8WWY7 111 aa11.31□□□□□ -0.6
CAPN1-214ENST00000528165 ZZEF1O43149 2961 aa11.31□□□□□ -0.6
CAPN1-214ENST00000528165 DCHS1Q96JQ0 3298 aa11.31□□□□□ -0.6
CAPN1-214ENST00000528165 TMEM238LA0A1B0GVL6 79 aa11.31□□□□□ -0.6
CAPN1-214ENST00000528165 A6NJY4 79 aa11.31□□□□□ -0.6
CAPN1-214ENST00000528165 CTSGP08311 255 aa11.31□□□□□ -0.6
CAPN1-214ENST00000528165 SPINK8P0C7L1 97 aa11.31□□□□□ -0.6
CAPN1-214ENST00000528165 CRYBA4P53673 196 aa11.31□□□□□ -0.6
CAPN1-214ENST00000528165 KLRD1Q13241 179 aa11.31□□□□□ -0.6
CAPN1-214ENST00000528165 RNF182Q8N6D2 247 aa11.31□□□□□ -0.6
CAPN1-214ENST00000528165 RAXQ9Y2V3 346 aa11.31□□□□□ -0.6
CAPN1-214ENST00000528165 MAP1BP46821 2468 aaKnown RBP11.31□□□□□ -0.6
CAPN1-214ENST00000528165 IGHV3-35A0A0C4DH35 117 aa11.31□□□□□ -0.6
CAPN1-214ENST00000528165 A0A0G2JNJ9 132 aa11.31□□□□□ -0.6
CAPN1-214ENST00000528165 LYNX1G3V0Z9 82 aa11.31□□□□□ -0.6
CAPN1-214ENST00000528165 LYNX1P0DP58 116 aa11.31□□□□□ -0.6
CAPN1-214ENST00000528165 SPANXN1Q5VSR9 72 aa11.31□□□□□ -0.6
CAPN1-214ENST00000528165 ZNF418Q8TF45 676 aaPredicted RBP11.31□□□□□ -0.6
CAPN1-214ENST00000528165 IGFBPL1Q8WX77 278 aa11.31□□□□□ -0.6
CAPN1-214ENST00000528165 C11orf21Q9P2W6 132 aa11.31□□□□□ -0.6
CAPN1-214ENST00000528165 DPM3Q9P2X0 92 aa11.31□□□□□ -0.6
CAPN1-214ENST00000528165 Q9UFV3 132 aa11.31□□□□□ -0.6
CAPN1-214ENST00000528165 BOD1L1Q8NFC6 3051 aa11.3□□□□□ -0.6
CAPN1-214ENST00000528165 RBAKDNA6NC62 111 aa11.3□□□□□ -0.6
CAPN1-214ENST00000528165 LGALS1P09382 135 aaKnown RBP11.3□□□□□ -0.6
CAPN1-214ENST00000528165 SCGB3A1Q96QR1 104 aa11.3□□□□□ -0.6
CAPN1-214ENST00000528165 KLK15Q9H2R5 256 aa11.3□□□□□ -0.6
CAPN1-214ENST00000528165 TMEM78Q5T7P6 136 aa11.3□□□□□ -0.6
CAPN1-214ENST00000528165 IGFL3Q6UXB1 125 aa11.3□□□□□ -0.6
CAPN1-214ENST00000528165 CDIP1Q9H305 208 aa11.3□□□□□ -0.6
CAPN1-214ENST00000528165 PRO3102Q9H379 93 aa11.3□□□□□ -0.6
CAPN1-214ENST00000528165 KALRNO60229 2985 aa11.29□□□□□ -0.6
CAPN1-214ENST00000528165 LOC107984156A0A0G2JMH3 177 aa11.29□□□□□ -0.6
CAPN1-214ENST00000528165 E7EQL1 145 aa11.29□□□□□ -0.6
CAPN1-214ENST00000528165 PSMB2P49721 201 aa11.29□□□□□ -0.6
CAPN1-214ENST00000528165 ARL17AQ8IVW1 177 aa11.29□□□□□ -0.6
CAPN1-214ENST00000528165 SMIM2Q9BVW6 85 aa11.29□□□□□ -0.6
CAPN1-214ENST00000528165 LINC01549A6NIU2 74 aa11.29□□□□□ -0.6
CAPN1-214ENST00000528165 SMCPP49901 116 aaPredicted RBP11.29□□□□□ -0.6
CAPN1-214ENST00000528165 IGHV7-4-1A0A0J9YVY3 117 aa11.28□□□□□ -0.6
CAPN1-214ENST00000528165 SCGB1D4Q6XE38 83 aa11.28□□□□□ -0.6
CAPN1-214ENST00000528165 NFE4Q86UQ8 179 aa11.28□□□□□ -0.6
CAPN1-214ENST00000528165 SH3BGRL2Q9UJC5 107 aa11.28□□□□□ -0.6
CAPN1-214ENST00000528165 NDPQ00604 133 aa11.28□□□□□ -0.6
CAPN1-214ENST00000528165 SRSF9Q13242 221 aaKnown RBP eCLIP11.28□□□□□ -0.6
CAPN1-214ENST00000528165 ORMDL2Q53FV1 153 aa11.28□□□□□ -0.6
CAPN1-214ENST00000528165 SFTA2Q6UW10 78 aa11.28□□□□□ -0.6
CAPN1-214ENST00000528165 AGPAT4-IT1Q9H0P7 198 aa11.28□□□□□ -0.6
CAPN1-214ENST00000528165 ZNF815PA8K554 130 aa11.27□□□□□ -0.6
CAPN1-214ENST00000528165 PRADC1Q9BSG0 188 aa11.27□□□□□ -0.6
CAPN1-214ENST00000528165 MT-ATP8P03928 68 aa11.27□□□□□ -0.61
CAPN1-214ENST00000528165 NEXN-AS1Q8NBZ9 246 aa11.27□□□□□ -0.61
CAPN1-214ENST00000528165 SLC50A1Q9BRV3 221 aa11.27□□□□□ -0.61
CAPN1-214ENST00000528165 CUL9Q8IWT3 2517 aa11.27□□□□□ -0.61
CAPN1-214ENST00000528165 GLMPQ8WWB7 406 aa11.27□□□□□ -0.61
CAPN1-214ENST00000528165 TOMM6Q96B49 74 aa11.27□□□□□ -0.61
CAPN1-214ENST00000528165 TSPAN13O95857 204 aa11.26□□□□□ -0.61
CAPN1-214ENST00000528165 LYRM7Q5U5X0 104 aa11.26□□□□□ -0.61
CAPN1-214ENST00000528165 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.26□□□□□ -0.61
CAPN1-214ENST00000528165 Q6ZUT4 128 aa11.26□□□□□ -0.61
CAPN1-214ENST00000528165 OR11H6Q8NGC7 330 aa11.26□□□□□ -0.61
CAPN1-214ENST00000528165 VKORC1Q9BQB6 163 aa11.26□□□□□ -0.61
CAPN1-214ENST00000528165 PCNX1Q96RV3 2341 aa11.26□□□□□ -0.61
CAPN1-214ENST00000528165 IGHV4-4A0A075B6R2 117 aa11.26□□□□□ -0.61
CAPN1-214ENST00000528165 SLC25A16P16260 332 aa11.26□□□□□ -0.61
CAPN1-214ENST00000528165 ZFP2Q6ZN57 461 aa11.25□□□□□ -0.61
CAPN1-214ENST00000528165 PPDPFLQ8WWR9 84 aa11.25□□□□□ -0.61
CAPN1-214ENST00000528165 IGHV3-66A0A0C4DH42 116 aa11.25□□□□□ -0.61
CAPN1-214ENST00000528165 H3BVH4 76 aa11.25□□□□□ -0.61
CAPN1-214ENST00000528165 BUB3O43684 328 aa11.25□□□□□ -0.61
CAPN1-214ENST00000528165 UBE2D1P51668 147 aa11.25□□□□□ -0.61
CAPN1-214ENST00000528165 XGP55808 180 aa11.25□□□□□ -0.61
CAPN1-214ENST00000528165 B9A039 149 aa11.24□□□□□ -0.61
CAPN1-214ENST00000528165 SUMO2P61956 95 aaKnown RBP11.24□□□□□ -0.61
CAPN1-214ENST00000528165 FHL3Q13643 280 aa11.24□□□□□ -0.61
CAPN1-214ENST00000528165 PTH2Q96A98 100 aa11.24□□□□□ -0.61
CAPN1-214ENST00000528165 DMXL2Q8TDJ6 3036 aa11.24□□□□□ -0.61
CAPN1-214ENST00000528165 WNK2Q9Y3S1 2297 aa11.24□□□□□ -0.61
CAPN1-214ENST00000528165 TEN1Q86WV5 123 aa11.23□□□□□ -0.61
CAPN1-214ENST00000528165 DEFB124Q8NES8 71 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 133.1 ms