RNA–Protein interactions for RNA: ENST00000516847.1

RN7SKP88-201, Transcript of RNA, 7SK small nuclear pseudogene 88, humanhuman

BASIC

Gene RN7SKP88, Length 250 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP88-201ENST00000516847 FAM19A2Q8N3H0 131 aa0.52□□□□□ -2.33
RN7SKP88-201ENST00000516847 C15orf53Q8NAA6 179 aa0.52□□□□□ -2.33
RN7SKP88-201ENST00000516847 OTOSQ8NHW6 89 aa0.52□□□□□ -2.33
RN7SKP88-201ENST00000516847 TSC22D3Q99576 134 aa0.52□□□□□ -2.33
RN7SKP88-201ENST00000516847 MRPL57Q9BQC6 102 aaKnown RBP0.52□□□□□ -2.33
RN7SKP88-201ENST00000516847 SMIM3Q9BZL3 60 aa0.52□□□□□ -2.33
RN7SKP88-201ENST00000516847 FAM107BQ9H098 131 aa0.52□□□□□ -2.33
RN7SKP88-201ENST00000516847 BANF2Q9H503 90 aa0.52□□□□□ -2.33
RN7SKP88-201ENST00000516847 SAR1AQ9NR31 198 aa0.52□□□□□ -2.33
RN7SKP88-201ENST00000516847 FKBP11Q9NYL4 201 aa0.52□□□□□ -2.33
RN7SKP88-201ENST00000516847 ERG28Q9UKR5 140 aa0.52□□□□□ -2.33
RN7SKP88-201ENST00000516847 ERCC6Q03468 1493 aa0.52□□□□□ -2.33
RN7SKP88-201ENST00000516847 CECR2Q9BXF3 1484 aa0.52□□□□□ -2.33
RN7SKP88-201ENST00000516847 COL4A1P02462 1669 aa0.52□□□□□ -2.33
RN7SKP88-201ENST00000516847 USP54Q70EL1 1684 aa0.52□□□□□ -2.33
RN7SKP88-201ENST00000516847 SIP14410 1827 aa0.52□□□□□ -2.33
RN7SKP88-201ENST00000516847 KIAA1549LQ6ZVL6 1849 aa0.52□□□□□ -2.33
RN7SKP88-201ENST00000516847 ALPK3Q96L96 1907 aa0.52□□□□□ -2.33
RN7SKP88-201ENST00000516847 UNC13CQ8NB66 2214 aa0.52□□□□□ -2.33
RN7SKP88-201ENST00000516847 IGKV3-7A0A075B6H7 116 aa0.51□□□□□ -2.33
RN7SKP88-201ENST00000516847 TRBV20-1A0A075B6N2 111 aa0.51□□□□□ -2.33
RN7SKP88-201ENST00000516847 IGKV2-40A0A087WW87 121 aaPredicted RBP0.51□□□□□ -2.33
RN7SKP88-201ENST00000516847 IGHV1-24A0A0C4DH33 117 aa0.51□□□□□ -2.33
RN7SKP88-201ENST00000516847 C3orf85A0A1B0GTC6 90 aa0.51□□□□□ -2.33
RN7SKP88-201ENST00000516847 M0R2P5 195 aa0.51□□□□□ -2.33
RN7SKP88-201ENST00000516847 CDC42EP2O14613 210 aa0.51□□□□□ -2.33
RN7SKP88-201ENST00000516847 GEMIN2O14893 280 aaKnown RBP0.51□□□□□ -2.33
RN7SKP88-201ENST00000516847 NPFFO15130 113 aa0.51□□□□□ -2.33
RN7SKP88-201ENST00000516847 CCL25O15444 150 aa0.51□□□□□ -2.33
RN7SKP88-201ENST00000516847 MCM3APO60318 1980 aa0.51□□□□□ -2.33
RN7SKP88-201ENST00000516847 IGKV2D-40P01614 121 aaPredicted RBP0.51□□□□□ -2.33
RN7SKP88-201ENST00000516847 IGHV3-30P01768 117 aa0.51□□□□□ -2.33
RN7SKP88-201ENST00000516847 RBP4P02753 201 aa0.51□□□□□ -2.33
RN7SKP88-201ENST00000516847 CD3DP04234 171 aa0.51□□□□□ -2.33
RN7SKP88-201ENST00000516847 CD2P06729 351 aa0.51□□□□□ -2.33
RN7SKP88-201ENST00000516847 LINC00694P0DN24 101 aa0.51□□□□□ -2.33
RN7SKP88-201ENST00000516847 IGHV3-30-5P0DP03 117 aa0.51□□□□□ -2.33
RN7SKP88-201ENST00000516847 KDELR1P24390 212 aa0.51□□□□□ -2.33
RN7SKP88-201ENST00000516847 PCBD1P61457 104 aa0.51□□□□□ -2.33
RN7SKP88-201ENST00000516847 COPZ1P61923 177 aa0.51□□□□□ -2.33
RN7SKP88-201ENST00000516847 SNRPD3P62318 126 aaKnown RBP0.51□□□□□ -2.33
RN7SKP88-201ENST00000516847 RPS25P62851 125 aaKnown RBP0.51□□□□□ -2.33
RN7SKP88-201ENST00000516847 SPCS2Q15005 226 aa0.51□□□□□ -2.33
RN7SKP88-201ENST00000516847 GDF5OSQ5U4N7 250 aa0.51□□□□□ -2.33
RN7SKP88-201ENST00000516847 CCDC171Q6TFL3 1326 aa0.51□□□□□ -2.33
RN7SKP88-201ENST00000516847 SCIMPQ6UWF3 145 aa0.51□□□□□ -2.33
RN7SKP88-201ENST00000516847 LINC00322Q6ZN03 302 aaPredicted RBP0.51□□□□□ -2.33
RN7SKP88-201ENST00000516847 ATP11AUNQ6ZP68 121 aa0.51□□□□□ -2.33
RN7SKP88-201ENST00000516847 ZCCHC23Q6ZST2 131 aa0.51□□□□□ -2.33
RN7SKP88-201ENST00000516847 GKN2Q86XP6 184 aa0.51□□□□□ -2.33
RN7SKP88-201ENST00000516847 TCTEX1D1Q8N7M0 179 aa0.51□□□□□ -2.33
RN7SKP88-201ENST00000516847 TSTD1Q8NFU3 115 aa0.51□□□□□ -2.33
RN7SKP88-201ENST00000516847 ATP6V0E2Q8NHE4 81 aa0.51□□□□□ -2.33
RN7SKP88-201ENST00000516847 SORL1Q92673 2214 aa0.51□□□□□ -2.33
RN7SKP88-201ENST00000516847 SMIM7Q9BQ49 75 aa0.51□□□□□ -2.33
RN7SKP88-201ENST00000516847 CDC42SE1Q9NRR8 79 aa0.51□□□□□ -2.33
RN7SKP88-201ENST00000516847 BICRAQ9NZM4 1560 aa0.51□□□□□ -2.33
RN7SKP88-201ENST00000516847 TMEM14CQ9P0S9 112 aa0.51□□□□□ -2.33
RN7SKP88-201ENST00000516847 COMMD3Q9UBI1 195 aa0.51□□□□□ -2.33
RN7SKP88-201ENST00000516847 MYH13Q9UKX3 1938 aa0.51□□□□□ -2.33
RN7SKP88-201ENST00000516847 NCOA3Q9Y6Q9 1424 aa0.51□□□□□ -2.33
RN7SKP88-201ENST00000516847 NOTCH2Q04721 2471 aa0.5□□□□□ -2.33
RN7SKP88-201ENST00000516847 MYH6P13533 1939 aa0.5□□□□□ -2.33
RN7SKP88-201ENST00000516847 HELZP42694 1942 aaKnown RBP0.5□□□□□ -2.33
RN7SKP88-201ENST00000516847 KIDINS220Q9ULH0 1771 aa0.5□□□□□ -2.33
RN7SKP88-201ENST00000516847 PTPRGP23470 1445 aa0.5□□□□□ -2.33
RN7SKP88-201ENST00000516847 FGD6Q6ZV73 1430 aa0.5□□□□□ -2.33
RN7SKP88-201ENST00000516847 ERBINQ96RT1 1412 aa0.5□□□□□ -2.33
RN7SKP88-201ENST00000516847 TMEM2Q9UHN6 1383 aa0.5□□□□□ -2.33
RN7SKP88-201ENST00000516847 A0A1W2PPB8 328 aa0.5□□□□□ -2.33
RN7SKP88-201ENST00000516847 A0A1W2PRS3 328 aa0.5□□□□□ -2.33
RN7SKP88-201ENST00000516847 BBIP1A8MTZ0 92 aa0.5□□□□□ -2.33
RN7SKP88-201ENST00000516847 KIR3DP1A8MWS1 328 aa0.5□□□□□ -2.33
RN7SKP88-201ENST00000516847 ZNF670-ZNF695F2Z2N8 137 aa0.5□□□□□ -2.33
RN7SKP88-201ENST00000516847 JMJD7-PLA2G4BH0Y9G9 81 aa0.5□□□□□ -2.33
RN7SKP88-201ENST00000516847 K7ERU9 68 aa0.5□□□□□ -2.33
RN7SKP88-201ENST00000516847 EDF1O60869 148 aaKnown RBP0.5□□□□□ -2.33
RN7SKP88-201ENST00000516847 PDE6GP18545 87 aa0.5□□□□□ -2.33
RN7SKP88-201ENST00000516847 KRTAP12-4P60329 112 aa0.5□□□□□ -2.33
RN7SKP88-201ENST00000516847 RHOHQ15669 191 aa0.5□□□□□ -2.33
RN7SKP88-201ENST00000516847 LCE1CQ5T751 118 aa0.5□□□□□ -2.33
RN7SKP88-201ENST00000516847 LCE1BQ5T7P3 118 aa0.5□□□□□ -2.33
RN7SKP88-201ENST00000516847 RPL13AP3Q6NVV1 102 aa0.5□□□□□ -2.33
RN7SKP88-201ENST00000516847 IDO2Q6ZQW0 420 aa0.5□□□□□ -2.33
RN7SKP88-201ENST00000516847 C3orf62Q6ZUJ4 267 aa0.5□□□□□ -2.33
RN7SKP88-201ENST00000516847 C5orf17Q8NAS9 161 aa0.5□□□□□ -2.33
RN7SKP88-201ENST00000516847 PLPP5Q8NEB5 264 aa0.5□□□□□ -2.33
RN7SKP88-201ENST00000516847 SDF2Q99470 211 aa0.5□□□□□ -2.33
RN7SKP88-201ENST00000516847 VPS25Q9BRG1 176 aa0.5□□□□□ -2.33
RN7SKP88-201ENST00000516847 TMEM191AQ9H0A3 160 aa0.5□□□□□ -2.33
RN7SKP88-201ENST00000516847 TAS2R8Q9NYW2 309 aa0.5□□□□□ -2.33
RN7SKP88-201ENST00000516847 CCDC167Q9P0B6 97 aa0.5□□□□□ -2.33
RN7SKP88-201ENST00000516847 TNFSF18Q9UNG2 199 aa0.5□□□□□ -2.33
RN7SKP88-201ENST00000516847 LSM2Q9Y333 95 aaKnown RBP0.5□□□□□ -2.33
RN7SKP88-201ENST00000516847 EML5Q05BV3 1969 aa0.5□□□□□ -2.33
RN7SKP88-201ENST00000516847 CASP8AP2Q9UKL3 1982 aa0.5□□□□□ -2.33
RN7SKP88-201ENST00000516847 PTPRDP23468 1912 aa0.5□□□□□ -2.33
RN7SKP88-201ENST00000516847 SIPA1L2Q9P2F8 1722 aaPredicted RBP0.5□□□□□ -2.33
RN7SKP88-201ENST00000516847 RP1L1Q8IWN7 2480 aaPredicted RBP0.49□□□□□ -2.33
RN7SKP88-201ENST00000516847 ADGRB1O14514 1584 aa0.49□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 155.5 ms