RNA–Protein interactions for RNA: ENST00000515035.5

TCOF1-214, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 2

Gene TCOF1, Length 5,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-214ENST00000515035 LMO1P25800 156 aa10.63□□□□□ -0.71
TCOF1-214ENST00000515035 RBM3P98179 157 aaKnown RBP10.63□□□□□ -0.71
TCOF1-214ENST00000515035 K7EN84 100 aa10.62□□□□□ -0.71
TCOF1-214ENST00000515035 YLPM1P49750 1951 aaKnown RBP10.62□□□□□ -0.71
TCOF1-214ENST00000515035 IGHG4P01861 327 aa10.62□□□□□ -0.71
TCOF1-214ENST00000515035 SPANXCQ9NY87 97 aa10.62□□□□□ -0.71
TCOF1-214ENST00000515035 PLXNA3P51805 1871 aa10.62□□□□□ -0.71
TCOF1-214ENST00000515035 MED13LQ71F56 2210 aa10.61□□□□□ -0.71
TCOF1-214ENST00000515035 TINCRA0A1B0GVN0 87 aa10.61□□□□□ -0.71
TCOF1-214ENST00000515035 CRLF1O75462 422 aa10.61□□□□□ -0.71
TCOF1-214ENST00000515035 CFC1BP0CG36 223 aa10.61□□□□□ -0.71
TCOF1-214ENST00000515035 CFC1P0CG37 223 aa10.61□□□□□ -0.71
TCOF1-214ENST00000515035 NSUN5P1Q3KNT7 163 aa10.61□□□□□ -0.71
TCOF1-214ENST00000515035 WDR81Q562E7 1941 aa10.61□□□□□ -0.71
TCOF1-214ENST00000515035 DEFB131AP59861 70 aa10.61□□□□□ -0.71
TCOF1-214ENST00000515035 TCTEX1D4Q5JR98 221 aa10.61□□□□□ -0.71
TCOF1-214ENST00000515035 TMEM14CQ9P0S9 112 aa10.61□□□□□ -0.71
TCOF1-214ENST00000515035 SYNJ2BPP57105 145 aa10.61□□□□□ -0.71
TCOF1-214ENST00000515035 SPINK13Q1W4C9 94 aa10.61□□□□□ -0.71
TCOF1-214ENST00000515035 DEFB130BP0DP73 79 aa10.6□□□□□ -0.71
TCOF1-214ENST00000515035 DEFB130AP0DP74 79 aa10.6□□□□□ -0.71
TCOF1-214ENST00000515035 KLF5Q13887 457 aaPredicted RBP10.6□□□□□ -0.71
TCOF1-214ENST00000515035 SSC4DQ8WTU2 575 aa10.6□□□□□ -0.71
TCOF1-214ENST00000515035 FXYD5Q96DB9 178 aa10.6□□□□□ -0.71
TCOF1-214ENST00000515035 PYGO2Q9BRQ0 406 aa10.6□□□□□ -0.71
TCOF1-214ENST00000515035 TMEM258P61165 79 aa10.6□□□□□ -0.71
TCOF1-214ENST00000515035 WT1-ASQ06250 92 aa10.6□□□□□ -0.71
TCOF1-214ENST00000515035 IGHV3-16A0A0C4DH30 117 aa10.6□□□□□ -0.71
TCOF1-214ENST00000515035 NXPH4O95158 308 aa10.6□□□□□ -0.71
TCOF1-214ENST00000515035 B4DSR2 109 aa10.6□□□□□ -0.71
TCOF1-214ENST00000515035 WIPF2Q8TF74 440 aaPredicted RBP10.6□□□□□ -0.71
TCOF1-214ENST00000515035 KLK9Q9UKQ9 250 aa10.6□□□□□ -0.71
TCOF1-214ENST00000515035 TDRG1Q3Y452 100 aa10.59□□□□□ -0.71
TCOF1-214ENST00000515035 MYLKQ15746 1914 aa10.59□□□□□ -0.71
TCOF1-214ENST00000515035 TSC2P49815 1807 aa10.59□□□□□ -0.71
TCOF1-214ENST00000515035 TRAV13-2A0A0B4J235 113 aa10.59□□□□□ -0.71
TCOF1-214ENST00000515035 H3BRN7 92 aa10.59□□□□□ -0.71
TCOF1-214ENST00000515035 C8orf86Q6ZUL3 223 aa10.59□□□□□ -0.71
TCOF1-214ENST00000515035 FAM110DQ8TAY7 271 aaPredicted RBP10.59□□□□□ -0.71
TCOF1-214ENST00000515035 COL4A6Q14031 1691 aa10.58□□□□□ -0.72
TCOF1-214ENST00000515035 TRAV25A0A0B4J276 109 aa10.58□□□□□ -0.72
TCOF1-214ENST00000515035 PRR20EP86478 221 aa10.58□□□□□ -0.72
TCOF1-214ENST00000515035 PRR20CP86479 221 aa10.58□□□□□ -0.72
TCOF1-214ENST00000515035 PRR20DP86480 221 aa10.58□□□□□ -0.72
TCOF1-214ENST00000515035 PRR20BP86481 221 aa10.58□□□□□ -0.72
TCOF1-214ENST00000515035 PRR20AP86496 221 aa10.58□□□□□ -0.72
TCOF1-214ENST00000515035 TRBV25-1A0A075B6N4 114 aa10.58□□□□□ -0.72
TCOF1-214ENST00000515035 IGLL5B9A064 214 aa10.58□□□□□ -0.72
TCOF1-214ENST00000515035 NUPR1O60356 82 aa10.58□□□□□ -0.72
TCOF1-214ENST00000515035 IGLC1P0CG04 106 aa10.58□□□□□ -0.72
TCOF1-214ENST00000515035 SAA4P35542 130 aa10.58□□□□□ -0.72
TCOF1-214ENST00000515035 FAM120AOSQ5T036 256 aa10.58□□□□□ -0.72
TCOF1-214ENST00000515035 DSCR8Q96T75 97 aa10.58□□□□□ -0.72
TCOF1-214ENST00000515035 C20orf78Q9BR46 151 aa10.58□□□□□ -0.72
TCOF1-214ENST00000515035 SCRT2Q9NQ03 307 aa10.58□□□□□ -0.72
TCOF1-214ENST00000515035 IGHV1OR15-1A0A075B7D0 117 aa10.58□□□□□ -0.72
TCOF1-214ENST00000515035 ATP6V0E1O15342 81 aa10.58□□□□□ -0.72
TCOF1-214ENST00000515035 IGFL3Q6UXB1 125 aa10.58□□□□□ -0.72
TCOF1-214ENST00000515035 PRSS29PA6NIE9 313 aa10.58□□□□□ -0.72
TCOF1-214ENST00000515035 COL8A2P25067 703 aa10.58□□□□□ -0.72
TCOF1-214ENST00000515035 PRSS33Q8NF86 280 aa10.58□□□□□ -0.72
TCOF1-214ENST00000515035 C1orf43Q9BWL3 253 aa10.58□□□□□ -0.72
TCOF1-214ENST00000515035 IGHV3-38A0A0C4DH36 116 aa10.57□□□□□ -0.72
TCOF1-214ENST00000515035 ZNF833PQ6ZTB9 187 aa10.57□□□□□ -0.72
TCOF1-214ENST00000515035 LY6G6EA0A0G2JKS1 128 aa10.57□□□□□ -0.72
TCOF1-214ENST00000515035 LY6HO94772 140 aa10.57□□□□□ -0.72
TCOF1-214ENST00000515035 BOD1L2Q8IYS8 172 aa10.57□□□□□ -0.72
TCOF1-214ENST00000515035 U3KQA8 63 aa10.57□□□□□ -0.72
TCOF1-214ENST00000515035 K7EM74 188 aa10.57□□□□□ -0.72
TCOF1-214ENST00000515035 XCL2Q9UBD3 114 aa10.57□□□□□ -0.72
TCOF1-214ENST00000515035 PCNX1Q96RV3 2341 aa10.56□□□□□ -0.72
TCOF1-214ENST00000515035 LTAP01374 205 aa10.56□□□□□ -0.72
TCOF1-214ENST00000515035 KLHL30-AS1Q8NEE0 82 aa10.56□□□□□ -0.72
TCOF1-214ENST00000515035 ZNRF2Q8NHG8 242 aa10.56□□□□□ -0.72
TCOF1-214ENST00000515035 CHD3Q12873 2000 aaKnown RBP10.56□□□□□ -0.72
TCOF1-214ENST00000515035 ANKRD39Q53RE8 183 aa10.55□□□□□ -0.72
TCOF1-214ENST00000515035 TEX36Q5VZQ5 186 aa10.55□□□□□ -0.72
TCOF1-214ENST00000515035 FOXI2Q6ZQN5 318 aa10.55□□□□□ -0.72
TCOF1-214ENST00000515035 PIP4P1Q86T03 277 aa10.55□□□□□ -0.72
TCOF1-214ENST00000515035 TMEM243Q9BU79 118 aa10.55□□□□□ -0.72
TCOF1-214ENST00000515035 ZNF561-AS1K7EIQ3 104 aa10.55□□□□□ -0.72
TCOF1-214ENST00000515035 BAALC-AS2P0C853 105 aa10.55□□□□□ -0.72
TCOF1-214ENST00000515035 C17orf58Q2M2W7 97 aa10.55□□□□□ -0.72
TCOF1-214ENST00000515035 THAP8Q8NA92 274 aa10.55□□□□□ -0.72
TCOF1-214ENST00000515035 ZNF493Q6ZR52 646 aa10.54□□□□□ -0.72
TCOF1-214ENST00000515035 TCF20Q9UGU0 1960 aaKnown RBP10.54□□□□□ -0.72
TCOF1-214ENST00000515035 G3V318 75 aa10.54□□□□□ -0.72
TCOF1-214ENST00000515035 ACYP1P07311 99 aa10.54□□□□□ -0.72
TCOF1-214ENST00000515035 WDR86Q86TI4 376 aa10.54□□□□□ -0.72
TCOF1-214ENST00000515035 TPSG1Q9NRR2 321 aa10.54□□□□□ -0.72
TCOF1-214ENST00000515035 HEATR5AQ86XA9 2040 aa10.54□□□□□ -0.72
TCOF1-214ENST00000515035 TRAV12-2A0A075B6T6 113 aa10.54□□□□□ -0.72
TCOF1-214ENST00000515035 ETV2O00321 342 aaPredicted RBP10.54□□□□□ -0.72
TCOF1-214ENST00000515035 HERVK_113P63121 156 aa10.54□□□□□ -0.72
TCOF1-214ENST00000515035 LINC00173Q6ZV60 143 aa10.54□□□□□ -0.72
TCOF1-214ENST00000515035 WFDC2Q14508 124 aa10.53□□□□□ -0.72
TCOF1-214ENST00000515035 RNASE13Q5GAN3 156 aaKnown RBP10.53□□□□□ -0.72
TCOF1-214ENST00000515035 SP5Q6BEB4 398 aaPredicted RBP10.53□□□□□ -0.72
TCOF1-214ENST00000515035 SHISA9B4DS77 424 aa10.53□□□□□ -0.72
TCOF1-214ENST00000515035 CFHR3Q02985 330 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 149.1 ms