RNA–Protein interactions for RNA: ENST00000509346.5

GYPA-206, Transcript of glycophorin A (MNS blood group), humanhuman

TSL 5

Gene GYPA, Length 383 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPA-206ENST00000509346 ANP32BQ92688 251 aaKnown RBP0.66□□□□□ -2.3
GYPA-206ENST00000509346 AIF1LQ9BQI0 150 aa0.66□□□□□ -2.3
GYPA-206ENST00000509346 BATF3Q9NR55 127 aa0.66□□□□□ -2.3
GYPA-206ENST00000509346 HIGD1AQ9Y241 93 aa0.66□□□□□ -2.3
GYPA-206ENST00000509346 FER1L6Q2WGJ9 1857 aa0.66□□□□□ -2.3
GYPA-206ENST00000509346 ROS1P08922 2347 aa0.66□□□□□ -2.3
GYPA-206ENST00000509346 PHRF1Q9P1Y6 1649 aaKnown RBP0.65□□□□□ -2.31
GYPA-206ENST00000509346 A0A1B0GW64 132 aa0.65□□□□□ -2.31
GYPA-206ENST00000509346 TMEM189A5PLL7 270 aa0.65□□□□□ -2.31
GYPA-206ENST00000509346 TCRAP04437 139 aa0.65□□□□□ -2.31
GYPA-206ENST00000509346 CD14P08571 375 aa0.65□□□□□ -2.31
GYPA-206ENST00000509346 GTF2A1P52655 376 aaPredicted RBP0.65□□□□□ -2.31
GYPA-206ENST00000509346 PSPHP78330 225 aa0.65□□□□□ -2.31
GYPA-206ENST00000509346 NEDD8Q15843 81 aa0.65□□□□□ -2.31
GYPA-206ENST00000509346 CCDC153Q494R4 210 aa0.65□□□□□ -2.31
GYPA-206ENST00000509346 OCIAD2Q56VL3 154 aa0.65□□□□□ -2.31
GYPA-206ENST00000509346 TMEM244Q5VVB8 128 aa0.65□□□□□ -2.31
GYPA-206ENST00000509346 TCTE3Q8IZS6 198 aa0.65□□□□□ -2.31
GYPA-206ENST00000509346 C10orf111Q8N326 155 aa0.65□□□□□ -2.31
GYPA-206ENST00000509346 OR4S1Q8NGB4 309 aa0.65□□□□□ -2.31
GYPA-206ENST00000509346 LIMD2Q9BT23 127 aa0.65□□□□□ -2.31
GYPA-206ENST00000509346 TANC2Q9HCD6 1990 aa0.65□□□□□ -2.31
GYPA-206ENST00000509346 FGD6Q6ZV73 1430 aa0.64□□□□□ -2.31
GYPA-206ENST00000509346 TET1Q8NFU7 2136 aa0.64□□□□□ -2.31
GYPA-206ENST00000509346 TRAV23DV6A0A075B6W5 121 aa0.64□□□□□ -2.31
GYPA-206ENST00000509346 A0A1W2PPB8 328 aa0.64□□□□□ -2.31
GYPA-206ENST00000509346 A0A1W2PPM0 123 aa0.64□□□□□ -2.31
GYPA-206ENST00000509346 A0A1W2PRS3 328 aa0.64□□□□□ -2.31
GYPA-206ENST00000509346 KIR3DP1A8MWS1 328 aa0.64□□□□□ -2.31
GYPA-206ENST00000509346 MT-ND4LP03901 98 aa0.64□□□□□ -2.31
GYPA-206ENST00000509346 GYPBP06028 91 aa0.64□□□□□ -2.31
GYPA-206ENST00000509346 PAEPP09466 180 aa0.64□□□□□ -2.31
GYPA-206ENST00000509346 HSD17B12Q53GQ0 312 aa0.64□□□□□ -2.31
GYPA-206ENST00000509346 TMEM91Q6ZNR0 172 aa0.64□□□□□ -2.31
GYPA-206ENST00000509346 DEFB132Q7Z7B7 95 aa0.64□□□□□ -2.31
GYPA-206ENST00000509346 OTOSQ8NHW6 89 aa0.64□□□□□ -2.31
GYPA-206ENST00000509346 LPAR5Q9H1C0 372 aa0.64□□□□□ -2.31
GYPA-206ENST00000509346 METTL1Q9UBP6 276 aaKnown RBP0.64□□□□□ -2.31
GYPA-206ENST00000509346 BOKQ9UMX3 212 aaPredicted RBP0.64□□□□□ -2.31
GYPA-206ENST00000509346 USP54Q70EL1 1684 aa0.64□□□□□ -2.31
GYPA-206ENST00000509346 CHD3Q12873 2000 aaKnown RBP0.64□□□□□ -2.31
GYPA-206ENST00000509346 XIRP1Q702N8 1843 aaKnown RBP0.64□□□□□ -2.31
GYPA-206ENST00000509346 LOC107984156A0A0G2JMH3 177 aa0.63□□□□□ -2.31
GYPA-206ENST00000509346 PNMA8CA0A1B0GUJ8 204 aa0.63□□□□□ -2.31
GYPA-206ENST00000509346 BBIP1A8MTZ0 92 aa0.63□□□□□ -2.31
GYPA-206ENST00000509346 SULT1C4O75897 302 aa0.63□□□□□ -2.31
GYPA-206ENST00000509346 OR2H2O95918 312 aa0.63□□□□□ -2.31
GYPA-206ENST00000509346 CMPK1P30085 196 aa0.63□□□□□ -2.31
GYPA-206ENST00000509346 CKS2P33552 79 aa0.63□□□□□ -2.31
GYPA-206ENST00000509346 CSAG1Q6PB30 78 aa0.63□□□□□ -2.31
GYPA-206ENST00000509346 C3orf62Q6ZUJ4 267 aa0.63□□□□□ -2.31
GYPA-206ENST00000509346 ARL17AQ8IVW1 177 aa0.63□□□□□ -2.31
GYPA-206ENST00000509346 MAGOHBQ96A72 148 aaKnown RBP0.63□□□□□ -2.31
GYPA-206ENST00000509346 DNAJC15Q9Y5T4 150 aa0.63□□□□□ -2.31
GYPA-206ENST00000509346 ARHGAP31Q2M1Z3 1444 aa0.63□□□□□ -2.31
GYPA-206ENST00000509346 LAMA4Q16363 1823 aa0.62□□□□□ -2.31
GYPA-206ENST00000509346 ARHGEF10O15013 1369 aa0.62□□□□□ -2.31
GYPA-206ENST00000509346 IGHV1-24A0A0C4DH33 117 aa0.62□□□□□ -2.31
GYPA-206ENST00000509346 K7EIL1 84 aa0.62□□□□□ -2.31
GYPA-206ENST00000509346 ARPC5O15511 151 aa0.62□□□□□ -2.31
GYPA-206ENST00000509346 EDF1O60869 148 aaKnown RBP0.62□□□□□ -2.31
GYPA-206ENST00000509346 CD3DP04234 171 aa0.62□□□□□ -2.31
GYPA-206ENST00000509346 HLA-DRB4P13762 266 aa0.62□□□□□ -2.31
GYPA-206ENST00000509346 HIST1H1BP16401 226 aaKnown RBP0.62□□□□□ -2.31
GYPA-206ENST00000509346 AKR1D1P51857 326 aa0.62□□□□□ -2.31
GYPA-206ENST00000509346 PRB3Q04118 309 aaPredicted RBP0.62□□□□□ -2.31
GYPA-206ENST00000509346 RHOHQ15669 191 aa0.62□□□□□ -2.31
GYPA-206ENST00000509346 ATOH7Q8N100 152 aa0.62□□□□□ -2.31
GYPA-206ENST00000509346 AP1S3Q96PC3 154 aa0.62□□□□□ -2.31
GYPA-206ENST00000509346 SMIM7Q9BQ49 75 aa0.62□□□□□ -2.31
GYPA-206ENST00000509346 HLA-DRB4X5D2U9 266 aa0.62□□□□□ -2.31
GYPA-206ENST00000509346 WDR97A6NE52 1622 aa0.62□□□□□ -2.31
GYPA-206ENST00000509346 MUC16Q8WXI7 14507 aa0.62□□□□□ -2.31
GYPA-206ENST00000509346 ZFC3H1O60293 1989 aaKnown RBP0.61□□□□□ -2.31
GYPA-206ENST00000509346 NUPR2A6NF83 97 aa0.61□□□□□ -2.31
GYPA-206ENST00000509346 SMIM24O75264 130 aa0.61□□□□□ -2.31
GYPA-206ENST00000509346 IGF2P01344 180 aa0.61□□□□□ -2.31
GYPA-206ENST00000509346 PCBD1P61457 104 aa0.61□□□□□ -2.31
GYPA-206ENST00000509346 RPL37AP61513 92 aaKnown RBP0.61□□□□□ -2.31
GYPA-206ENST00000509346 Q6ZQY7 126 aa0.61□□□□□ -2.31
GYPA-206ENST00000509346 OR8J3Q8NGG0 315 aa0.61□□□□□ -2.31
GYPA-206ENST00000509346 CALML5Q9NZT1 146 aa0.61□□□□□ -2.31
GYPA-206ENST00000509346 MUC4Q99102 2169 aa0.61□□□□□ -2.31
GYPA-206ENST00000509346 CNTRLQ7Z7A1 2325 aa0.61□□□□□ -2.31
GYPA-206ENST00000509346 PTPRGP23470 1445 aa0.61□□□□□ -2.31
GYPA-206ENST00000509346 SNRNP200O75643 2136 aaKnown RBP0.61□□□□□ -2.31
GYPA-206ENST00000509346 KIAA1549LQ6ZVL6 1849 aa0.6□□□□□ -2.31
GYPA-206ENST00000509346 SNRPD3P62318 126 aaKnown RBP0.6□□□□□ -2.31
GYPA-206ENST00000509346 PLGLB1Q02325 96 aa0.6□□□□□ -2.31
GYPA-206ENST00000509346 C10orf99Q6UWK7 81 aa0.6□□□□□ -2.31
GYPA-206ENST00000509346 LYPD5Q6UWN5 251 aa0.6□□□□□ -2.31
GYPA-206ENST00000509346 IDO2Q6ZQW0 420 aa0.6□□□□□ -2.31
GYPA-206ENST00000509346 CCL19Q99731 98 aa0.6□□□□□ -2.31
GYPA-206ENST00000509346 SLC35B3Q9H1N7 401 aa0.6□□□□□ -2.31
GYPA-206ENST00000509346 MRPL35Q9NZE8 188 aaKnown RBP0.6□□□□□ -2.31
GYPA-206ENST00000509346 MRPL36Q9P0J6 103 aaKnown RBP0.6□□□□□ -2.31
GYPA-206ENST00000509346 COMMD3Q9UBI1 195 aa0.6□□□□□ -2.31
GYPA-206ENST00000509346 CITO14578 2027 aa0.6□□□□□ -2.31
GYPA-206ENST00000509346 MED12Q93074 2177 aa0.6□□□□□ -2.31
GYPA-206ENST00000509346 PTPRDP23468 1912 aa0.6□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms