RNA–Protein interactions for RNA: ENST00000495554.1

CHTOP-206, Transcript of chromatin target of PRMT1, humanhuman

TSL 2

Gene CHTOP, Length 2,553 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-206ENST00000495554 TRAV41A0A0B4J266 112 aa11.41□□□□□ -0.58
CHTOP-206ENST00000495554 LEPROTL1O95214 131 aa11.41□□□□□ -0.58
CHTOP-206ENST00000495554 SLC50A1Q9BRV3 221 aa11.41□□□□□ -0.58
CHTOP-206ENST00000495554 IGLC3P0DOY3 106 aa11.4□□□□□ -0.58
CHTOP-206ENST00000495554 SRSF1Q07955 248 aaKnown RBP eCLIP11.4□□□□□ -0.58
CHTOP-206ENST00000495554 ATOH7Q8N100 152 aa11.4□□□□□ -0.58
CHTOP-206ENST00000495554 METTL26Q96S19 204 aa11.4□□□□□ -0.58
CHTOP-206ENST00000495554 TRAV40A0A0B4J280 105 aa11.4□□□□□ -0.58
CHTOP-206ENST00000495554 CRIP2P52943 208 aaPredicted RBP11.4□□□□□ -0.58
CHTOP-206ENST00000495554 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.4□□□□□ -0.58
CHTOP-206ENST00000495554 TRAV9-2A0A087WT02 112 aa11.39□□□□□ -0.59
CHTOP-206ENST00000495554 RBAKDNA6NC62 111 aa11.39□□□□□ -0.59
CHTOP-206ENST00000495554 FAM223BA6NKX1 122 aa11.39□□□□□ -0.59
CHTOP-206ENST00000495554 IGHV4-38-2P0DP08 117 aa11.39□□□□□ -0.59
CHTOP-206ENST00000495554 C19orf54Q5BKX5 351 aa11.39□□□□□ -0.59
CHTOP-206ENST00000495554 FAM223AQ8IWN6 122 aa11.39□□□□□ -0.59
CHTOP-206ENST00000495554 MTURNQ8N3F0 131 aa11.39□□□□□ -0.59
CHTOP-206ENST00000495554 WIPF1O43516 503 aa11.39□□□□□ -0.59
CHTOP-206ENST00000495554 ZNF80P51504 273 aaPredicted RBP11.39□□□□□ -0.59
CHTOP-206ENST00000495554 ZNF138P52744 262 aa11.39□□□□□ -0.59
CHTOP-206ENST00000495554 SRSF2Q01130 221 aaKnown RBP11.39□□□□□ -0.59
CHTOP-206ENST00000495554 RPL32P62910 135 aaKnown RBP11.38□□□□□ -0.59
CHTOP-206ENST00000495554 VAMP3Q15836 100 aa11.38□□□□□ -0.59
CHTOP-206ENST00000495554 FBN2P35556 2912 aa11.38□□□□□ -0.59
CHTOP-206ENST00000495554 IGHV3-66A0A0C4DH42 116 aa11.38□□□□□ -0.59
CHTOP-206ENST00000495554 SYS1-DBNDD2H3BUS1 97 aa11.38□□□□□ -0.59
CHTOP-206ENST00000495554 CSN3P07498 182 aa11.38□□□□□ -0.59
CHTOP-206ENST00000495554 SMAGPQ0VAQ4 97 aa11.38□□□□□ -0.59
CHTOP-206ENST00000495554 FER1L6-AS1Q8NA97 138 aa11.38□□□□□ -0.59
CHTOP-206ENST00000495554 AP5S1Q9NUS5 200 aa11.38□□□□□ -0.59
CHTOP-206ENST00000495554 FAM208BQ5VWN6 2430 aa11.38□□□□□ -0.59
CHTOP-206ENST00000495554 TMEM213A2RRL7 107 aa11.37□□□□□ -0.59
CHTOP-206ENST00000495554 FABP5P3A8MUU1 101 aa11.37□□□□□ -0.59
CHTOP-206ENST00000495554 FAM104BQ5XKR9 115 aa11.37□□□□□ -0.59
CHTOP-206ENST00000495554 ZNF843Q8N446 348 aa11.37□□□□□ -0.59
CHTOP-206ENST00000495554 RNF182Q8N6D2 247 aa11.37□□□□□ -0.59
CHTOP-206ENST00000495554 U3KQE9 123 aa11.37□□□□□ -0.59
CHTOP-206ENST00000495554 PRAC2D3DTV9 90 aa11.37□□□□□ -0.59
CHTOP-206ENST00000495554 C5orf47Q569G3 176 aa11.37□□□□□ -0.59
CHTOP-206ENST00000495554 HSPB8Q9UJY1 196 aa11.37□□□□□ -0.59
CHTOP-206ENST00000495554 IGHV3OR16-13A0A075B7E8 117 aa11.36□□□□□ -0.59
CHTOP-206ENST00000495554 IGHV3-74A0A0B4J1X5 117 aa11.36□□□□□ -0.59
CHTOP-206ENST00000495554 UBR5O95071 2799 aaPredicted RBP11.36□□□□□ -0.59
CHTOP-206ENST00000495554 TRGV3P03979 118 aa11.36□□□□□ -0.59
CHTOP-206ENST00000495554 IGF1P05019 195 aa11.36□□□□□ -0.59
CHTOP-206ENST00000495554 MSMBP08118 114 aa11.36□□□□□ -0.59
CHTOP-206ENST00000495554 IGLC6P0CF74 106 aa11.36□□□□□ -0.59
CHTOP-206ENST00000495554 ERCC8Q13216 396 aa11.36□□□□□ -0.59
CHTOP-206ENST00000495554 SPATA12Q7Z6I5 190 aa11.36□□□□□ -0.59
CHTOP-206ENST00000495554 SMIM20Q8N5G0 67 aa11.36□□□□□ -0.59
CHTOP-206ENST00000495554 PRSS3P2Q8NHM4 247 aa11.36□□□□□ -0.59
CHTOP-206ENST00000495554 U3KQK5 164 aa11.36□□□□□ -0.59
CHTOP-206ENST00000495554 LRRK2Q5S007 2527 aa11.36□□□□□ -0.59
CHTOP-206ENST00000495554 GAGE12BA1L429 117 aa11.36□□□□□ -0.59
CHTOP-206ENST00000495554 AVPP01185 164 aa11.36□□□□□ -0.59
CHTOP-206ENST00000495554 Q6ZN92 141 aa11.36□□□□□ -0.59
CHTOP-206ENST00000495554 LINC00173Q6ZV60 143 aa11.36□□□□□ -0.59
CHTOP-206ENST00000495554 MRPL53Q96EL3 112 aaKnown RBP11.36□□□□□ -0.59
CHTOP-206ENST00000495554 SIGMAR1Q99720 223 aa11.36□□□□□ -0.59
CHTOP-206ENST00000495554 MAP1LC3CQ9BXW4 147 aa11.36□□□□□ -0.59
CHTOP-206ENST00000495554 LINC00527Q9UJ94 153 aa11.36□□□□□ -0.59
CHTOP-206ENST00000495554 D6R8Y8 96 aa11.35□□□□□ -0.59
CHTOP-206ENST00000495554 ORM1P02763 201 aa11.35□□□□□ -0.59
CHTOP-206ENST00000495554 FA2HQ7L5A8 372 aa11.35□□□□□ -0.59
CHTOP-206ENST00000495554 AMN1Q8IY45 258 aa11.35□□□□□ -0.59
CHTOP-206ENST00000495554 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.35□□□□□ -0.592e-13■■■■□ 21.6
CHTOP-206ENST00000495554 OR4C46A6NHA9 309 aa11.35□□□□□ -0.59
CHTOP-206ENST00000495554 ZNF207O43670 478 aaKnown RBP11.35□□□□□ -0.59
CHTOP-206ENST00000495554 C8orf86Q6ZUL3 223 aa11.35□□□□□ -0.59
CHTOP-206ENST00000495554 ZNF575Q86XF7 245 aa11.35□□□□□ -0.59
CHTOP-206ENST00000495554 ORMDL3Q8N138 153 aa11.35□□□□□ -0.59
CHTOP-206ENST00000495554 LAMTOR2Q9Y2Q5 125 aa11.35□□□□□ -0.59
CHTOP-206ENST00000495554 EPG5Q9HCE0 2579 aa11.35□□□□□ -0.59
CHTOP-206ENST00000495554 IGHV3-49A0A0A0MS15 119 aa11.34□□□□□ -0.59
CHTOP-206ENST00000495554 IGLL1P15814 213 aa11.34□□□□□ -0.59
CHTOP-206ENST00000495554 HNRNPA3P51991 378 aaKnown RBP11.34□□□□□ -0.59
CHTOP-206ENST00000495554 TWIST1Q15672 202 aa11.34□□□□□ -0.59
CHTOP-206ENST00000495554 MRAP2Q96G30 205 aa11.34□□□□□ -0.59
CHTOP-206ENST00000495554 TRAV8-2A0A0B4J237 113 aa11.34□□□□□ -0.59
CHTOP-206ENST00000495554 LINC01559Q495D7 138 aa11.34□□□□□ -0.59
CHTOP-206ENST00000495554 PRELID3AQ96N28 172 aa11.34□□□□□ -0.59
CHTOP-206ENST00000495554 CNFNQ9BYD5 112 aa11.34□□□□□ -0.59
CHTOP-206ENST00000495554 TSSC4Q9Y5U2 329 aaPredicted RBP11.34□□□□□ -0.59
CHTOP-206ENST00000495554 USP9YO00507 2555 aaPredicted RBP11.33□□□□□ -0.6
CHTOP-206ENST00000495554 MUC21A0A0G2JKD1 596 aa11.33□□□□□ -0.6
CHTOP-206ENST00000495554 MUC21A0A140T8X8 626 aa11.33□□□□□ -0.6
CHTOP-206ENST00000495554 MUC21Q5SSG8 566 aa11.33□□□□□ -0.6
CHTOP-206ENST00000495554 IL17RELQ6ZVW7 336 aa11.33□□□□□ -0.6
CHTOP-206ENST00000495554 OR10AG1Q8NH19 301 aa11.33□□□□□ -0.6
CHTOP-206ENST00000495554 TMEM191AQ9H0A3 160 aa11.33□□□□□ -0.6
CHTOP-206ENST00000495554 AGPAT4-IT1Q9H0P7 198 aa11.33□□□□□ -0.6
CHTOP-206ENST00000495554 GTSF1LQ9H1H1 148 aa11.33□□□□□ -0.6
CHTOP-206ENST00000495554 CENPEQ02224 2701 aa11.33□□□□□ -0.6
CHTOP-206ENST00000495554 CSPG4Q6UVK1 2322 aa11.33□□□□□ -0.6
CHTOP-206ENST00000495554 POLQO75417 2590 aa11.33□□□□□ -0.6
CHTOP-206ENST00000495554 H3BUA1 57 aa11.33□□□□□ -0.6
CHTOP-206ENST00000495554 IGHG2P01859 326 aa11.33□□□□□ -0.6
CHTOP-206ENST00000495554 MRPL51Q4U2R6 128 aaKnown RBP11.33□□□□□ -0.6
CHTOP-206ENST00000495554 TMEM78Q5T7P6 136 aa11.33□□□□□ -0.6
CHTOP-206ENST00000495554 B4DSR2 109 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms