RNA–Protein interactions for RNA: ENST00000491747.6

BRCA1-219, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-219ENST00000491747 CGB1A6NKQ9 187 aa7.22□□□□□ -1.25
BRCA1-219ENST00000491747 LTAP01374 205 aa7.22□□□□□ -1.25
BRCA1-219ENST00000491747 IGHV3-48P01763 117 aa7.22□□□□□ -1.25
BRCA1-219ENST00000491747 PF4P02776 101 aa7.22□□□□□ -1.25
BRCA1-219ENST00000491747 FOXA3P55318 350 aaPredicted RBP7.22□□□□□ -1.25
BRCA1-219ENST00000491747 OXLD1Q5BKU9 147 aa7.22□□□□□ -1.25
BRCA1-219ENST00000491747 RBPMS2Q6ZRY4 209 aaKnown RBP7.22□□□□□ -1.25
BRCA1-219ENST00000491747 LINC00482Q8N8I6 264 aa7.22□□□□□ -1.25
BRCA1-219ENST00000491747 SRSF12Q8WXF0 261 aaKnown RBP7.22□□□□□ -1.25
BRCA1-219ENST00000491747 RPH3ALQ9UNE2 315 aa7.22□□□□□ -1.25
BRCA1-219ENST00000491747 CHEK1O14757 476 aa7.21□□□□□ -1.26
BRCA1-219ENST00000491747 SAMD5Q5TGI4 173 aa7.21□□□□□ -1.26
BRCA1-219ENST00000491747 Q6ZVH6 145 aa7.21□□□□□ -1.26
BRCA1-219ENST00000491747 RNASE8Q8TDE3 154 aaKnown RBP7.21□□□□□ -1.26
BRCA1-219ENST00000491747 GTSF1Q8WW33 167 aa7.21□□□□□ -1.26
BRCA1-219ENST00000491747 UBE2E2Q96LR5 201 aa7.21□□□□□ -1.26
BRCA1-219ENST00000491747 SGK494Q96LW2 274 aa7.21□□□□□ -1.26
BRCA1-219ENST00000491747 TRGV9Q99603 122 aa7.21□□□□□ -1.26
BRCA1-219ENST00000491747 NDFIP1Q9BT67 221 aa7.21□□□□□ -1.26
BRCA1-219ENST00000491747 TRAV30A0A087WSZ9 112 aa7.2□□□□□ -1.26
BRCA1-219ENST00000491747 C19orf71A6NCJ1 209 aa7.2□□□□□ -1.26
BRCA1-219ENST00000491747 CCL24O00175 119 aa7.2□□□□□ -1.26
BRCA1-219ENST00000491747 TCRAP04437 139 aa7.2□□□□□ -1.26
BRCA1-219ENST00000491747 RBX1P62877 108 aa7.2□□□□□ -1.26
BRCA1-219ENST00000491747 VAMP3Q15836 100 aa7.2□□□□□ -1.26
BRCA1-219ENST00000491747 SLC25A34Q6PIV7 304 aa7.2□□□□□ -1.26
BRCA1-219ENST00000491747 SPATA12Q7Z6I5 190 aa7.2□□□□□ -1.26
BRCA1-219ENST00000491747 C4orf3Q8WVX3 66 aa7.2□□□□□ -1.26
BRCA1-219ENST00000491747 PGLYRP4Q96LB8 373 aa7.2□□□□□ -1.26
BRCA1-219ENST00000491747 MAP1LC3CQ9BXW4 147 aa7.2□□□□□ -1.26
BRCA1-219ENST00000491747 MRPL36Q9P0J6 103 aaKnown RBP7.2□□□□□ -1.26
BRCA1-219ENST00000491747 TEX22C9J3V5 150 aa7.2□□□□□ -1.26
BRCA1-219ENST00000491747 MPV17L2Q567V2 206 aa7.2□□□□□ -1.26
BRCA1-219ENST00000491747 HSPB8Q9UJY1 196 aa7.2□□□□□ -1.26
BRCA1-219ENST00000491747 LOC102724200A0A096LPH7 203 aaPredicted RBP7.19□□□□□ -1.26
BRCA1-219ENST00000491747 IGHV3-11P01762 117 aa7.19□□□□□ -1.26
BRCA1-219ENST00000491747 CRYGCP07315 174 aa7.19□□□□□ -1.26
BRCA1-219ENST00000491747 BEAN1Q3B7T3 259 aa7.19□□□□□ -1.26
BRCA1-219ENST00000491747 PET117Q6UWS5 81 aa7.19□□□□□ -1.26
BRCA1-219ENST00000491747 LINC00322Q6ZN03 302 aaPredicted RBP7.19□□□□□ -1.26
BRCA1-219ENST00000491747 OR11H1Q8NG94 326 aa7.19□□□□□ -1.26
BRCA1-219ENST00000491747 Q9H3A6 140 aa7.19□□□□□ -1.26
BRCA1-219ENST00000491747 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.19□□□□□ -1.26
BRCA1-219ENST00000491747 NPIPB6E9PJ23 425 aa7.19□□□□□ -1.26
BRCA1-219ENST00000491747 TRGV3P03979 118 aa7.19□□□□□ -1.26
BRCA1-219ENST00000491747 GP9P14770 177 aa7.19□□□□□ -1.26
BRCA1-219ENST00000491747 CDKN1BP46527 198 aa7.19□□□□□ -1.26
BRCA1-219ENST00000491747 FHL3Q13643 280 aa7.19□□□□□ -1.26
BRCA1-219ENST00000491747 TMEM116Q8NCL8 245 aa7.19□□□□□ -1.26
BRCA1-219ENST00000491747 MS4A6AQ9H2W1 248 aa7.19□□□□□ -1.26
BRCA1-219ENST00000491747 NOTCH1P46531 2555 aa7.19□□□□□ -1.26
BRCA1-219ENST00000491747 hDV102S1A0JD36 115 aa7.18□□□□□ -1.26
BRCA1-219ENST00000491747 NUDT3O95989 172 aa7.18□□□□□ -1.26
BRCA1-219ENST00000491747 RPL27AP46776 148 aaKnown RBP7.18□□□□□ -1.26
BRCA1-219ENST00000491747 PLP1P60201 277 aa7.18□□□□□ -1.26
BRCA1-219ENST00000491747 SAPCD1Q5SSQ6 148 aa7.18□□□□□ -1.26
BRCA1-219ENST00000491747 TMEM190Q8WZ59 177 aa7.18□□□□□ -1.26
BRCA1-219ENST00000491747 DNAH3Q8TD57 4116 aa7.18□□□□□ -1.26
BRCA1-219ENST00000491747 RPS20P60866 119 aaKnown RBP7.18□□□□□ -1.26
BRCA1-219ENST00000491747 RHOGP84095 191 aa7.18□□□□□ -1.26
BRCA1-219ENST00000491747 BVES-AS1Q5T3Y7 98 aa7.18□□□□□ -1.26
BRCA1-219ENST00000491747 KPRPQ5T749 579 aaPredicted RBP7.18□□□□□ -1.26
BRCA1-219ENST00000491747 PVRIGQ6DKI7 326 aa7.18□□□□□ -1.26
BRCA1-219ENST00000491747 TTC9CQ8N5M4 171 aa7.18□□□□□ -1.26
BRCA1-219ENST00000491747 DEFB125Q8N687 156 aa7.18□□□□□ -1.26
BRCA1-219ENST00000491747 OR1N2Q8NGR9 330 aa7.18□□□□□ -1.26
BRCA1-219ENST00000491747 OTORQ9NRC9 128 aa7.18□□□□□ -1.26
BRCA1-219ENST00000491747 IGHV4OR15-8A0A075B7B6 117 aa7.17□□□□□ -1.26
BRCA1-219ENST00000491747 A0A087WW49 117 aa7.17□□□□□ -1.26
BRCA1-219ENST00000491747 H3BUA1 57 aa7.17□□□□□ -1.26
BRCA1-219ENST00000491747 BRI3O95415 125 aa7.17□□□□□ -1.26
BRCA1-219ENST00000491747 PRB2P02812 416 aaPredicted RBP7.17□□□□□ -1.26
BRCA1-219ENST00000491747 LGALS1P09382 135 aaKnown RBP7.17□□□□□ -1.26
BRCA1-219ENST00000491747 LINC00173Q6ZV60 143 aa7.17□□□□□ -1.26
BRCA1-219ENST00000491747 Q86TA4 180 aa7.17□□□□□ -1.26
BRCA1-219ENST00000491747 SCRT2Q9NQ03 307 aa7.17□□□□□ -1.26
BRCA1-219ENST00000491747 HIGD1AQ9Y241 93 aa7.17□□□□□ -1.26
BRCA1-219ENST00000491747 SLURP1P55000 103 aa7.17□□□□□ -1.26
BRCA1-219ENST00000491747 HIST1H1AQ02539 215 aaPredicted RBP7.17□□□□□ -1.26
BRCA1-219ENST00000491747 A0A1B0GUT8 65 aa7.16□□□□□ -1.26
BRCA1-219ENST00000491747 TAX1BP3O14907 124 aa7.16□□□□□ -1.26
BRCA1-219ENST00000491747 ANKRD39Q53RE8 183 aa7.16□□□□□ -1.26
BRCA1-219ENST00000491747 AP5S1Q9NUS5 200 aa7.16□□□□□ -1.26
BRCA1-219ENST00000491747 TMEM14CQ9P0S9 112 aa7.16□□□□□ -1.26
BRCA1-219ENST00000491747 NPIPB5A8MRT5 1133 aa7.16□□□□□ -1.26
BRCA1-219ENST00000491747 H3BTX0 84 aa7.16□□□□□ -1.26
BRCA1-219ENST00000491747 TRBV12-3P01733 135 aa7.16□□□□□ -1.26
BRCA1-219ENST00000491747 APOHP02749 345 aaPredicted RBP7.16□□□□□ -1.26
BRCA1-219ENST00000491747 HOXD3P31249 432 aaPredicted RBP7.16□□□□□ -1.26
BRCA1-219ENST00000491747 CSN1S1P47710 185 aa7.16□□□□□ -1.26
BRCA1-219ENST00000491747 KRTAP10-11P60412 298 aa7.16□□□□□ -1.26
BRCA1-219ENST00000491747 RIGQ13278 110 aa7.16□□□□□ -1.26
BRCA1-219ENST00000491747 COTL1Q14019 142 aa7.16□□□□□ -1.26
BRCA1-219ENST00000491747 LINC01545Q5VT33 79 aa7.16□□□□□ -1.26
BRCA1-219ENST00000491747 PRNTQ86SH4 94 aa7.16□□□□□ -1.26
BRCA1-219ENST00000491747 ARL6IP6Q8N6S5 226 aa7.16□□□□□ -1.26
BRCA1-219ENST00000491747 DLX4Q92988 240 aaPredicted RBP7.16□□□□□ -1.26
BRCA1-219ENST00000491747 FANCD2OSQ96PS1 177 aa7.16□□□□□ -1.26
BRCA1-219ENST00000491747 PMCHL2Q9BQD1 86 aa7.16□□□□□ -1.26
BRCA1-219ENST00000491747 TP73-AS1Q9UF72 201 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms