RNA–Protein interactions for RNA: ENST00000488733.1

ATP1A1-208, Transcript of ATPase Na+/K+ transporting subunit alpha 1, humanhuman

TSL 2

Gene ATP1A1, Length 1,728 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1A1-208ENST00000488733 HIST1H1AQ02539 215 aaPredicted RBP15.2■□□□□ 0.02
ATP1A1-208ENST00000488733 MS4A6AQ9H2W1 248 aa15.2■□□□□ 0.02
ATP1A1-208ENST00000488733 C2CD3Q4AC94 2353 aa15.19■□□□□ 0.02
ATP1A1-208ENST00000488733 TRBV7-9A0A0J9YWB2 115 aa15.18■□□□□ 0.02
ATP1A1-208ENST00000488733 HAX1O00165 279 aa15.18■□□□□ 0.02
ATP1A1-208ENST00000488733 APCSP02743 223 aa15.18■□□□□ 0.02
ATP1A1-208ENST00000488733 OR8A1Q8NGG7 326 aa15.18■□□□□ 0.02
ATP1A1-208ENST00000488733 RNF114Q9Y508 228 aa15.18■□□□□ 0.02
ATP1A1-208ENST00000488733 A0A1B0GUT8 65 aa15.17■□□□□ 0.02
ATP1A1-208ENST00000488733 A0A1B0GW15 77 aa15.17■□□□□ 0.02
ATP1A1-208ENST00000488733 S100A8P05109 93 aa15.17■□□□□ 0.02
ATP1A1-208ENST00000488733 SNRPD3P62318 126 aaKnown RBP15.17■□□□□ 0.02
ATP1A1-208ENST00000488733 PAFAH1B2P68402 229 aa15.17■□□□□ 0.02
ATP1A1-208ENST00000488733 HIST3H2BBQ8N257 126 aa15.17■□□□□ 0.02
ATP1A1-208ENST00000488733 OR9G4Q8NGQ1 327 aa15.17■□□□□ 0.02
ATP1A1-208ENST00000488733 BORCS7Q96B45 105 aa15.17■□□□□ 0.02
ATP1A1-208ENST00000488733 TEP1Q99973 2627 aaKnown RBP15.17■□□□□ 0.02
ATP1A1-208ENST00000488733 K7EQG2 157 aa15.17■□□□□ 0.02
ATP1A1-208ENST00000488733 CAMPP49913 170 aa15.17■□□□□ 0.02
ATP1A1-208ENST00000488733 RIGQ13278 110 aa15.17■□□□□ 0.02
ATP1A1-208ENST00000488733 WFDC3Q8IUB2 231 aa15.17■□□□□ 0.02
ATP1A1-208ENST00000488733 TSSC4Q9Y5U2 329 aaPredicted RBP15.17■□□□□ 0.02
ATP1A1-208ENST00000488733 ORM1P02763 201 aa15.16■□□□□ 0.02
ATP1A1-208ENST00000488733 CD28P10747 220 aa15.16■□□□□ 0.02
ATP1A1-208ENST00000488733 CRISP2P16562 243 aa15.16■□□□□ 0.02
ATP1A1-208ENST00000488733 LINC01559Q495D7 138 aa15.16■□□□□ 0.02
ATP1A1-208ENST00000488733 JMJD1CQ15652 2540 aa15.15■□□□□ 0.02
ATP1A1-208ENST00000488733 ZNF705DP0CH99 300 aaPredicted RBP15.15■□□□□ 0.02
ATP1A1-208ENST00000488733 ZNF705BP0CI00 300 aaPredicted RBP15.15■□□□□ 0.02
ATP1A1-208ENST00000488733 S100A2P29034 98 aa15.15■□□□□ 0.02
ATP1A1-208ENST00000488733 PROK1P58294 105 aa15.15■□□□□ 0.02
ATP1A1-208ENST00000488733 C11orf44Q8N8P7 122 aa15.15■□□□□ 0.02
ATP1A1-208ENST00000488733 SELENOKQ9Y6D0 94 aa15.15■□□□□ 0.02
ATP1A1-208ENST00000488733 GDF5OSQ5U4N7 250 aa15.14■□□□□ 0.01
ATP1A1-208ENST00000488733 GFI1BQ5VTD9 330 aa15.14■□□□□ 0.01
ATP1A1-208ENST00000488733 ADAMTSL5Q6ZMM2 481 aa15.14■□□□□ 0.01
ATP1A1-208ENST00000488733 DLX4Q92988 240 aaPredicted RBP15.14■□□□□ 0.01
ATP1A1-208ENST00000488733 NIPBLQ6KC79 2804 aaeCLIP15.14■□□□□ 0.01
ATP1A1-208ENST00000488733 TMSB15BA0A087X1C1 80 aa15.14■□□□□ 0.01
ATP1A1-208ENST00000488733 Q0VG73 95 aa15.14■□□□□ 0.01
ATP1A1-208ENST00000488733 TFPI2P48307 235 aa15.13■□□□□ 0.01
ATP1A1-208ENST00000488733 SLAQ13239 276 aa15.13■□□□□ 0.01
ATP1A1-208ENST00000488733 FHL3Q13643 280 aa15.13■□□□□ 0.01
ATP1A1-208ENST00000488733 HIST2H2BDQ6DRA6 164 aa15.13■□□□□ 0.01
ATP1A1-208ENST00000488733 FAM19A4Q96LR4 140 aa15.13■□□□□ 0.01
ATP1A1-208ENST00000488733 DUX3Q96PT4 197 aa15.13■□□□□ 0.01
ATP1A1-208ENST00000488733 TRAV2A0A0B4J234 112 aa15.12■□□□□ 0.01
ATP1A1-208ENST00000488733 RAX2Q96IS3 184 aa15.12■□□□□ 0.01
ATP1A1-208ENST00000488733 CITED2Q99967 270 aaPredicted RBP15.12■□□□□ 0.01
ATP1A1-208ENST00000488733 IFITM10A6NMD0 228 aa15.12■□□□□ 0.01
ATP1A1-208ENST00000488733 F6UB75 175 aa15.12■□□□□ 0.01
ATP1A1-208ENST00000488733 CCL24O00175 119 aa15.12■□□□□ 0.01
ATP1A1-208ENST00000488733 CSN3P07498 182 aa15.12■□□□□ 0.01
ATP1A1-208ENST00000488733 ARMS2P0C7Q2 107 aa15.12■□□□□ 0.01
ATP1A1-208ENST00000488733 OR10J3Q5JRS4 329 aa15.12■□□□□ 0.01
ATP1A1-208ENST00000488733 LYZL1Q6UWQ5 148 aa15.12■□□□□ 0.01
ATP1A1-208ENST00000488733 ZFAND2AQ8N6M9 145 aa15.12■□□□□ 0.01
ATP1A1-208ENST00000488733 FER1L6-AS1Q8NA97 138 aa15.12■□□□□ 0.01
ATP1A1-208ENST00000488733 GATD1Q8NB37 220 aa15.12■□□□□ 0.01
ATP1A1-208ENST00000488733 TPPP3Q9BW30 176 aa15.12■□□□□ 0.01
ATP1A1-208ENST00000488733 ZNF688P0C7X2 276 aa15.11■□□□□ 0.01
ATP1A1-208ENST00000488733 IGLC6P0CF74 106 aa15.11■□□□□ 0.01
ATP1A1-208ENST00000488733 KIAA1644Q3SXP7 199 aa15.11■□□□□ 0.01
ATP1A1-208ENST00000488733 PSMG4Q5JS54 123 aa15.11■□□□□ 0.01
ATP1A1-208ENST00000488733 APRG1Q8IVJ8 170 aa15.11■□□□□ 0.01
ATP1A1-208ENST00000488733 TRAV21A0A0B4J279 112 aa15.1■□□□□ 0.01
ATP1A1-208ENST00000488733 A0A1B0GUS0 222 aa15.1■□□□□ 0.01
ATP1A1-208ENST00000488733 GRIFINA4D1Z8 144 aa15.1■□□□□ 0.01
ATP1A1-208ENST00000488733 F2Z2F3 143 aa15.1■□□□□ 0.01
ATP1A1-208ENST00000488733 CTRLP40313 264 aa15.1■□□□□ 0.01
ATP1A1-208ENST00000488733 DEFB1P60022 68 aa15.1■□□□□ 0.01
ATP1A1-208ENST00000488733 PDZD11Q5EBL8 140 aa15.1■□□□□ 0.01
ATP1A1-208ENST00000488733 A0A1W2PRX2 142 aa15.09■□□□□ 0.01
ATP1A1-208ENST00000488733 GPX1P07203 203 aa15.09■□□□□ 0.01
ATP1A1-208ENST00000488733 SRIP30626 198 aa15.09■□□□□ 0.01
ATP1A1-208ENST00000488733 LINC00518Q8N0U6 118 aa15.09■□□□□ 0.01
ATP1A1-208ENST00000488733 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP15.09■□□□□ 0.01
ATP1A1-208ENST00000488733 DYNLRB2Q8TF09 96 aa15.09■□□□□ 0.01
ATP1A1-208ENST00000488733 ODF3Q96PU9 254 aa15.09■□□□□ 0.01
ATP1A1-208ENST00000488733 SSBP4Q9BWG4 385 aaPredicted RBP15.09■□□□□ 0.01
ATP1A1-208ENST00000488733 EBLN2Q6P2I7 272 aa15.09■□□□□ 0.01
ATP1A1-208ENST00000488733 ZNF575Q86XF7 245 aa15.09■□□□□ 0.01
ATP1A1-208ENST00000488733 BAGE3Q86Y29 109 aa15.09■□□□□ 0.01
ATP1A1-208ENST00000488733 IGKV3D-20A0A0C4DH25 116 aa15.08■□□□□ 0
ATP1A1-208ENST00000488733 A0A0J9YX75 114 aa15.08■□□□□ 0
ATP1A1-208ENST00000488733 HIST1H2BLQ99880 126 aa15.08■□□□□ 0
ATP1A1-208ENST00000488733 DUSP14O95147 198 aaKnown RBP15.07■□□□□ 0
ATP1A1-208ENST00000488733 FABP4P15090 132 aa15.07■□□□□ 0
ATP1A1-208ENST00000488733 PRR9Q5T870 116 aa15.07■□□□□ 0
ATP1A1-208ENST00000488733 ZNF493Q6ZR52 646 aa15.07■□□□□ 0
ATP1A1-208ENST00000488733 TMEM18Q96B42 140 aa15.07■□□□□ 0
ATP1A1-208ENST00000488733 C11orf21Q9P2W6 132 aa15.07■□□□□ 0
ATP1A1-208ENST00000488733 ESDP10768 282 aa15.06■□□□□ 0
ATP1A1-208ENST00000488733 DEFB114Q30KQ6 69 aa15.06■□□□□ 0
ATP1A1-208ENST00000488733 TMEM256Q8N2U0 113 aa15.06■□□□□ 0
ATP1A1-208ENST00000488733 ALKBH7Q9BT30 221 aaPredicted RBP15.06■□□□□ 0
ATP1A1-208ENST00000488733 CNFNQ9BYD5 112 aa15.06■□□□□ 0
ATP1A1-208ENST00000488733 SIGLEC8Q9NYZ4 499 aa15.06■□□□□ 0
ATP1A1-208ENST00000488733 SMIM6P0DI80 62 aa15.06■□□□□ 0
ATP1A1-208ENST00000488733 LEPP41159 167 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms