RNA–Protein interactions for RNA: ENST00000485454.1

SFPQ-209, Transcript of splicing factor proline and glutamine rich, humanhuman

TSL 2

Gene SFPQ, Length 339 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFPQ-209ENST00000485454 CIB3Q96Q77 187 aaPredicted RBP-0.71□□□□□ -2.52
SFPQ-209ENST00000485454 SIGMAR1Q99720 223 aa-0.71□□□□□ -2.52
SFPQ-209ENST00000485454 OR2J1Q9GZK6 312 aa-0.71□□□□□ -2.52
SFPQ-209ENST00000485454 BPESC1Q9GZL8 116 aa-0.71□□□□□ -2.52
SFPQ-209ENST00000485454 C19orf12Q9NSK7 152 aa-0.71□□□□□ -2.52
SFPQ-209ENST00000485454 WNK1Q9H4A3 2382 aa-0.71□□□□□ -2.52
SFPQ-209ENST00000485454 MGAM2Q2M2H8 2515 aa-0.72□□□□□ -2.52
SFPQ-209ENST00000485454 CAMSAP2Q08AD1 1489 aa-0.72□□□□□ -2.52
SFPQ-209ENST00000485454 N4BP2Q86UW6 1770 aaPredicted RBP-0.72□□□□□ -2.52
SFPQ-209ENST00000485454 CSMD3Q7Z407 3707 aa-0.72□□□□□ -2.52
SFPQ-209ENST00000485454 BANF1O75531 89 aa-0.72□□□□□ -2.52
SFPQ-209ENST00000485454 NDUFC2O95298 119 aa-0.72□□□□□ -2.52
SFPQ-209ENST00000485454 TRACP01848 142 aa-0.72□□□□□ -2.52
SFPQ-209ENST00000485454 TRGC2P03986 189 aa-0.72□□□□□ -2.52
SFPQ-209ENST00000485454 CXCL1P09341 107 aa-0.72□□□□□ -2.52
SFPQ-209ENST00000485454 RPL35P42766 123 aaKnown RBP-0.72□□□□□ -2.52
SFPQ-209ENST00000485454 DNAJB13P59910 316 aa-0.72□□□□□ -2.52
SFPQ-209ENST00000485454 HSPE1P61604 102 aaKnown RBP-0.72□□□□□ -2.52
SFPQ-209ENST00000485454 COTL1Q14019 142 aa-0.72□□□□□ -2.52
SFPQ-209ENST00000485454 LIN52Q52LA3 116 aa-0.72□□□□□ -2.52
SFPQ-209ENST00000485454 CSAG1Q6PB30 78 aa-0.72□□□□□ -2.52
SFPQ-209ENST00000485454 DMAC1Q96GE9 116 aa-0.72□□□□□ -2.52
SFPQ-209ENST00000485454 ASB4Q9Y574 426 aa-0.72□□□□□ -2.52
SFPQ-209ENST00000485454 PIEZO2Q9H5I5 2752 aa-0.72□□□□□ -2.52
SFPQ-209ENST00000485454 STARD9Q9P2P6 4700 aa-0.72□□□□□ -2.53
SFPQ-209ENST00000485454 RTL9Q8NET4 1388 aa-0.72□□□□□ -2.53
SFPQ-209ENST00000485454 ALMS1Q8TCU4 4167 aa-0.72□□□□□ -2.53
SFPQ-209ENST00000485454 CCDC144AA2RUR9 1427 aa-0.72□□□□□ -2.53
SFPQ-209ENST00000485454 UHRF1BP1Q6BDS2 1440 aa-0.72□□□□□ -2.53
SFPQ-209ENST00000485454 PDZD2O15018 2839 aa-0.73□□□□□ -2.53
SFPQ-209ENST00000485454 HELZP42694 1942 aaKnown RBP-0.73□□□□□ -2.53
SFPQ-209ENST00000485454 C3orf85A0A1B0GTC6 90 aa-0.73□□□□□ -2.53
SFPQ-209ENST00000485454 K7ERJ3 54 aa-0.73□□□□□ -2.53
SFPQ-209ENST00000485454 LYPLA2O95372 231 aa-0.73□□□□□ -2.53
SFPQ-209ENST00000485454 APOA2P02652 100 aa-0.73□□□□□ -2.53
SFPQ-209ENST00000485454 FABP4P15090 132 aa-0.73□□□□□ -2.53
SFPQ-209ENST00000485454 OGNP20774 298 aaKnown RBP-0.73□□□□□ -2.53
SFPQ-209ENST00000485454 NDUFA6P56556 154 aa-0.73□□□□□ -2.53
SFPQ-209ENST00000485454 HBBP68871 147 aa-0.73□□□□□ -2.53
SFPQ-209ENST00000485454 TAF1AQ15573 450 aaPredicted RBP-0.73□□□□□ -2.53
SFPQ-209ENST00000485454 SNCBQ16143 134 aa-0.73□□□□□ -2.53
SFPQ-209ENST00000485454 CCL4L1Q8NHW4 92 aa-0.73□□□□□ -2.53
SFPQ-209ENST00000485454 OR2H1Q9GZK4 316 aa-0.73□□□□□ -2.53
SFPQ-209ENST00000485454 COA4Q9NYJ1 87 aa-0.73□□□□□ -2.53
SFPQ-209ENST00000485454 TNS1Q9HBL0 1735 aaKnown RBP-0.73□□□□□ -2.53
SFPQ-209ENST00000485454 DLEC1Q9Y238 1755 aa-0.73□□□□□ -2.53
SFPQ-209ENST00000485454 SPTBN1Q01082 2364 aaKnown RBP-0.74□□□□□ -2.53
SFPQ-209ENST00000485454 CCDC168Q8NDH2 2452 aa-0.74□□□□□ -2.53
SFPQ-209ENST00000485454 RREB1Q92766 1687 aa-0.74□□□□□ -2.53
SFPQ-209ENST00000485454 ITPR3Q14573 2671 aa-0.74□□□□□ -2.53
SFPQ-209ENST00000485454 TRAV12-2A0A075B6T6 113 aa-0.74□□□□□ -2.53
SFPQ-209ENST00000485454 TMEM30CPA0ZSE6 113 aa-0.74□□□□□ -2.53
SFPQ-209ENST00000485454 H7BYZ3 331 aa-0.74□□□□□ -2.53
SFPQ-209ENST00000485454 TPST1O60507 370 aa-0.74□□□□□ -2.53
SFPQ-209ENST00000485454 NMBP08949 121 aa-0.74□□□□□ -2.53
SFPQ-209ENST00000485454 SDC4P31431 198 aa-0.74□□□□□ -2.53
SFPQ-209ENST00000485454 CAPZBP47756 277 aa-0.74□□□□□ -2.53
SFPQ-209ENST00000485454 INSL3P51460 131 aa-0.74□□□□□ -2.53
SFPQ-209ENST00000485454 NCALDP61601 193 aa-0.74□□□□□ -2.53
SFPQ-209ENST00000485454 C1orf140Q5VVS0 124 aa-0.74□□□□□ -2.53
SFPQ-209ENST00000485454 OR4B1Q8NGF8 309 aa-0.74□□□□□ -2.53
SFPQ-209ENST00000485454 NEK7Q8TDX7 302 aa-0.74□□□□□ -2.53
SFPQ-209ENST00000485454 CFAP53Q96M91 514 aa-0.74□□□□□ -2.53
SFPQ-209ENST00000485454 GPX7Q96SL4 187 aaPredicted RBP-0.74□□□□□ -2.53
SFPQ-209ENST00000485454 FAM32AQ9Y421 112 aaKnown RBP-0.74□□□□□ -2.53
SFPQ-209ENST00000485454 LAMA5O15230 3695 aa-0.74□□□□□ -2.53
SFPQ-209ENST00000485454 CDK12Q9NYV4 1490 aaPredicted RBP-0.74□□□□□ -2.53
SFPQ-209ENST00000485454 CHD6Q8TD26 2715 aa-0.74□□□□□ -2.53
SFPQ-209ENST00000485454 NHSL1Q5SYE7 1610 aa-0.75□□□□□ -2.53
SFPQ-209ENST00000485454 C2CD3Q4AC94 2353 aa-0.75□□□□□ -2.53
SFPQ-209ENST00000485454 C5orf58C9J3I9 102 aa-0.75□□□□□ -2.53
SFPQ-209ENST00000485454 C1QBP02746 253 aa-0.75□□□□□ -2.53
SFPQ-209ENST00000485454 RPS17P08708 135 aaKnown RBP-0.75□□□□□ -2.53
SFPQ-209ENST00000485454 LSM6P62312 80 aaKnown RBP-0.75□□□□□ -2.53
SFPQ-209ENST00000485454 OR8J3Q8NGG0 315 aa-0.75□□□□□ -2.53
SFPQ-209ENST00000485454 RTL8AQ9BWD3 113 aa-0.75□□□□□ -2.53
SFPQ-209ENST00000485454 CYP4F30PQ9H0H9 118 aa-0.75□□□□□ -2.53
SFPQ-209ENST00000485454 CD109Q6YHK3 1445 aa-0.75□□□□□ -2.53
SFPQ-209ENST00000485454 ADGRL3Q9HAR2 1447 aa-0.75□□□□□ -2.53
SFPQ-209ENST00000485454 USP54Q70EL1 1684 aa-0.75□□□□□ -2.53
SFPQ-209ENST00000485454 WDR87Q6ZQQ6 2873 aa-0.75□□□□□ -2.53
SFPQ-209ENST00000485454 CELSR3Q9NYQ7 3312 aa-0.76□□□□□ -2.53
SFPQ-209ENST00000485454 TEX49A0A1B0GTD5 131 aa-0.76□□□□□ -2.53
SFPQ-209ENST00000485454 IFITM5A6NNB3 132 aa-0.76□□□□□ -2.53
SFPQ-209ENST00000485454 RIIAD1A6NNX1 92 aa-0.76□□□□□ -2.53
SFPQ-209ENST00000485454 C9JAW5 83 aa-0.76□□□□□ -2.53
SFPQ-209ENST00000485454 H7C1C5 153 aa-0.76□□□□□ -2.53
SFPQ-209ENST00000485454 MT-ND6P03923 174 aa-0.76□□□□□ -2.53
SFPQ-209ENST00000485454 SAA1P0DJI8 122 aaPredicted RBP-0.76□□□□□ -2.53
SFPQ-209ENST00000485454 LCN6P62502 163 aa-0.76□□□□□ -2.53
SFPQ-209ENST00000485454 CCL7P80098 99 aa-0.76□□□□□ -2.53
SFPQ-209ENST00000485454 RHOHQ15669 191 aa-0.76□□□□□ -2.53
SFPQ-209ENST00000485454 MSMO1Q15800 293 aa-0.76□□□□□ -2.53
SFPQ-209ENST00000485454 DEFB109BQ30KR1 87 aa-0.76□□□□□ -2.53
SFPQ-209ENST00000485454 AKIRIN2Q53H80 203 aa-0.76□□□□□ -2.53
SFPQ-209ENST00000485454 PTRHD1Q6GMV3 140 aaKnown RBP-0.76□□□□□ -2.53
SFPQ-209ENST00000485454 LYPD5Q6UWN5 251 aa-0.76□□□□□ -2.53
SFPQ-209ENST00000485454 NUP35Q8NFH5 326 aa-0.76□□□□□ -2.53
SFPQ-209ENST00000485454 OR8J2Q8NGG1 315 aa-0.76□□□□□ -2.53
SFPQ-209ENST00000485454 ATG5Q9H1Y0 275 aa-0.76□□□□□ -2.53
Retrieved 100 of 20,778 RNA–protein pairs in 174.6 ms