RNA–Protein interactions for RNA: ENST00000476391.5

HDAC1-206, Transcript of histone deacetylase 1, humanhuman

TSL 1 (best)

Gene HDAC1, Length 2,409 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-206ENST00000476391 CCL4P13236 92 aa10.72□□□□□ -0.69
HDAC1-206ENST00000476391 ZNF80P51504 273 aaPredicted RBP10.72□□□□□ -0.69
HDAC1-206ENST00000476391 C21orf62Q9NYP8 219 aa10.72□□□□□ -0.69
HDAC1-206ENST00000476391 IGKV1-17P01599 117 aa10.72□□□□□ -0.69
HDAC1-206ENST00000476391 IGHV3-30P01768 117 aa10.72□□□□□ -0.69
HDAC1-206ENST00000476391 IGHV3-30-5P0DP03 117 aa10.72□□□□□ -0.69
HDAC1-206ENST00000476391 CRIP2P52943 208 aaPredicted RBP10.72□□□□□ -0.69
HDAC1-206ENST00000476391 Q6ZT83 130 aa10.72□□□□□ -0.69
HDAC1-206ENST00000476391 GAFA1Q96PS6 74 aa10.72□□□□□ -0.69
HDAC1-206ENST00000476391 TNRC18O15417 2968 aaPredicted RBP10.71□□□□□ -0.69
HDAC1-206ENST00000476391 TIMM23O14925 209 aa10.71□□□□□ -0.69
HDAC1-206ENST00000476391 WIPF1O43516 503 aa10.71□□□□□ -0.69
HDAC1-206ENST00000476391 ORM1P02763 201 aa10.71□□□□□ -0.69
HDAC1-206ENST00000476391 FOXC1Q12948 553 aa10.71□□□□□ -0.69
HDAC1-206ENST00000476391 C1orf210Q8IVY1 113 aa10.71□□□□□ -0.69
HDAC1-206ENST00000476391 SCGB3A1Q96QR1 104 aa10.71□□□□□ -0.69
HDAC1-206ENST00000476391 NBEAQ8NFP9 2946 aa10.71□□□□□ -0.7
HDAC1-206ENST00000476391 LGALS9O00182 355 aa10.7□□□□□ -0.7
HDAC1-206ENST00000476391 ZNF672Q499Z4 452 aaPredicted RBP10.7□□□□□ -0.7
HDAC1-206ENST00000476391 ORMDL2Q53FV1 153 aa10.7□□□□□ -0.7
HDAC1-206ENST00000476391 FAM201AQ5SY85 155 aa10.7□□□□□ -0.7
HDAC1-206ENST00000476391 TOMM6Q96B49 74 aa10.7□□□□□ -0.7
HDAC1-206ENST00000476391 CTSZQ9UBR2 303 aa10.7□□□□□ -0.7
HDAC1-206ENST00000476391 VPS13AQ96RL7 3174 aa10.7□□□□□ -0.7
HDAC1-206ENST00000476391 TRBV7-7A0A0K0K1E9 115 aa10.7□□□□□ -0.7
HDAC1-206ENST00000476391 EPOPA6NHQ4 379 aa10.7□□□□□ -0.7
HDAC1-206ENST00000476391 M0R2P5 195 aa10.7□□□□□ -0.7
HDAC1-206ENST00000476391 SPANXDQ9BXN6 97 aa10.7□□□□□ -0.7
HDAC1-206ENST00000476391 RAI1Q7Z5J4 1906 aaPredicted RBP10.69□□□□□ -0.7
HDAC1-206ENST00000476391 IGKV2-40A0A087WW87 121 aaPredicted RBP10.69□□□□□ -0.7
HDAC1-206ENST00000476391 FAM240AA0A1B0GVK7 77 aa10.69□□□□□ -0.7
HDAC1-206ENST00000476391 I3L2K1 104 aa10.69□□□□□ -0.7
HDAC1-206ENST00000476391 IGKV2D-40P01614 121 aaPredicted RBP10.69□□□□□ -0.7
HDAC1-206ENST00000476391 ATXN8Q156A1 80 aa10.69□□□□□ -0.7
HDAC1-206ENST00000476391 TMEM155Q4W5P6 130 aa10.69□□□□□ -0.7
HDAC1-206ENST00000476391 TRPT1Q86TN4 253 aaKnown RBP10.69□□□□□ -0.7
HDAC1-206ENST00000476391 ZNF491Q8N8L2 437 aa10.69□□□□□ -0.7
HDAC1-206ENST00000476391 C1orf162Q8NEQ5 155 aaPredicted RBP10.69□□□□□ -0.7
HDAC1-206ENST00000476391 RNF125Q96EQ8 232 aa10.69□□□□□ -0.7
HDAC1-206ENST00000476391 TIMD4Q96H15 378 aa10.69□□□□□ -0.7
HDAC1-206ENST00000476391 CHCHD5Q9BSY4 110 aa10.69□□□□□ -0.7
HDAC1-206ENST00000476391 DKK4Q9UBT3 224 aa10.69□□□□□ -0.7
HDAC1-206ENST00000476391 CACNA1EQ15878 2313 aa10.69□□□□□ -0.7
HDAC1-206ENST00000476391 IGLV1-44P01699 117 aa10.69□□□□□ -0.7
HDAC1-206ENST00000476391 SLC25A29Q8N8R3 303 aa10.69□□□□□ -0.7
HDAC1-206ENST00000476391 SMIM9A6NGZ8 99 aa10.68□□□□□ -0.7
HDAC1-206ENST00000476391 H3BMM0 161 aa10.68□□□□□ -0.7
HDAC1-206ENST00000476391 LINC00694P0DN24 101 aa10.68□□□□□ -0.7
HDAC1-206ENST00000476391 HES1Q14469 280 aa10.68□□□□□ -0.7
HDAC1-206ENST00000476391 LINC01620Q4KN68 170 aa10.68□□□□□ -0.7
HDAC1-206ENST00000476391 UBE2WQ96B02 151 aa10.68□□□□□ -0.7
HDAC1-206ENST00000476391 RNF7Q9UBF6 113 aa10.68□□□□□ -0.7
HDAC1-206ENST00000476391 SIGLEC9Q9Y336 463 aa10.68□□□□□ -0.7
HDAC1-206ENST00000476391 EYSQ5T1H1 3165 aa10.68□□□□□ -0.7
HDAC1-206ENST00000476391 TEX49A0A1B0GTD5 131 aa10.68□□□□□ -0.7
HDAC1-206ENST00000476391 GATA4P43694 442 aa10.68□□□□□ -0.7
HDAC1-206ENST00000476391 LRRC75A-AS1Q8N1F1 130 aa10.68□□□□□ -0.7
HDAC1-206ENST00000476391 LINC00311Q8N616 119 aa10.68□□□□□ -0.7
HDAC1-206ENST00000476391 FAM216BQ8N7L0 139 aa10.68□□□□□ -0.7
HDAC1-206ENST00000476391 CCL13Q99616 98 aa10.68□□□□□ -0.7
HDAC1-206ENST00000476391 SMIM2Q9BVW6 85 aa10.68□□□□□ -0.7
HDAC1-206ENST00000476391 TRBV10-2A0A0K0K1G8 114 aa10.67□□□□□ -0.7
HDAC1-206ENST00000476391 HERVK_113P61574 105 aa10.67□□□□□ -0.7
HDAC1-206ENST00000476391 ERCC8Q13216 396 aa10.67□□□□□ -0.7
HDAC1-206ENST00000476391 C8orf31Q8N9H6 132 aa10.67□□□□□ -0.7
HDAC1-206ENST00000476391 KLHL30-AS1Q8NEE0 82 aa10.67□□□□□ -0.7
HDAC1-206ENST00000476391 BAALCQ8WXS3 180 aa10.67□□□□□ -0.7
HDAC1-206ENST00000476391 IGHV3-33P01772 117 aa10.67□□□□□ -0.7
HDAC1-206ENST00000476391 CFIP05156 583 aa10.67□□□□□ -0.7
HDAC1-206ENST00000476391 APELAP0DMC3 54 aa10.67□□□□□ -0.7
HDAC1-206ENST00000476391 Q8TAT8 98 aa10.67□□□□□ -0.7
HDAC1-206ENST00000476391 TRAV25A0A0B4J276 109 aa10.66□□□□□ -0.7
HDAC1-206ENST00000476391 A0A1B0GX51 115 aa10.66□□□□□ -0.7
HDAC1-206ENST00000476391 PAPPA-AS1Q5QFB9 102 aa10.66□□□□□ -0.7
HDAC1-206ENST00000476391 SAP25Q8TEE9 199 aa10.66□□□□□ -0.7
HDAC1-206ENST00000476391 SPANXCQ9NY87 97 aa10.66□□□□□ -0.7
HDAC1-206ENST00000476391 ABCA1O95477 2261 aa10.66□□□□□ -0.7
HDAC1-206ENST00000476391 IGHG3P01860 377 aa10.66□□□□□ -0.7
HDAC1-206ENST00000476391 TRGV3P03979 118 aa10.66□□□□□ -0.7
HDAC1-206ENST00000476391 IMUPQ9GZP8 106 aa10.66□□□□□ -0.7
HDAC1-206ENST00000476391 A0A0B4J2C4 111 aa10.65□□□□□ -0.7
HDAC1-206ENST00000476391 IGHV1-18A0A0C4DH31 117 aa10.65□□□□□ -0.7
HDAC1-206ENST00000476391 J3KT08 172 aa10.65□□□□□ -0.7
HDAC1-206ENST00000476391 NDUFA7O95182 113 aa10.65□□□□□ -0.7
HDAC1-206ENST00000476391 CRYGBP07316 175 aa10.65□□□□□ -0.7
HDAC1-206ENST00000476391 DEFB108BQ8NET1 73 aa10.65□□□□□ -0.7
HDAC1-206ENST00000476391 TEX22C9J3V5 150 aa10.65□□□□□ -0.71
HDAC1-206ENST00000476391 SPRY3O43610 288 aa10.65□□□□□ -0.71
HDAC1-206ENST00000476391 RPL7P18124 248 aaKnown RBP10.65□□□□□ -0.71
HDAC1-206ENST00000476391 MSMPQ1L6U9 139 aa10.65□□□□□ -0.71
HDAC1-206ENST00000476391 IGF2-ASQ6U949 168 aa10.65□□□□□ -0.71
HDAC1-206ENST00000476391 C3orf56Q8N813 242 aa10.65□□□□□ -0.71
HDAC1-206ENST00000476391 TMEM101Q96IK0 257 aa10.65□□□□□ -0.71
HDAC1-206ENST00000476391 TRAV26-2A0A0B4J265 109 aa10.64□□□□□ -0.71
HDAC1-206ENST00000476391 SPRR3Q9UBC9 169 aa10.64□□□□□ -0.71
HDAC1-206ENST00000476391 TRGV5A0A0B4J1U4 118 aa10.64□□□□□ -0.71
HDAC1-206ENST00000476391 NPFFO15130 113 aa10.64□□□□□ -0.71
HDAC1-206ENST00000476391 Q6ZS46 218 aa10.64□□□□□ -0.71
HDAC1-206ENST00000476391 C3orf22Q8N5N4 141 aa10.64□□□□□ -0.71
HDAC1-206ENST00000476391 TMEM263Q8WUH6 116 aaKnown RBP10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 101.9 ms