RNA–Protein interactions for RNA: ENST00000471322.2

HSPG2-208, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 1,602 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-208ENST00000471322 ZNF138P52744 262 aa13.19□□□□□ -0.3
HSPG2-208ENST00000471322 ATP5L2Q7Z4Y8 100 aa13.19□□□□□ -0.3
HSPG2-208ENST00000471322 ZNF738Q8NE65 137 aa13.19□□□□□ -0.3
HSPG2-208ENST00000471322 OR1N2Q8NGR9 330 aa13.19□□□□□ -0.3
HSPG2-208ENST00000471322 C8orf49Q96NF6 230 aa13.19□□□□□ -0.3
HSPG2-208ENST00000471322 XKRY2A2RUG3 117 aa13.18□□□□□ -0.3
HSPG2-208ENST00000471322 CRIP1P50238 77 aa13.18□□□□□ -0.3
HSPG2-208ENST00000471322 LINC00477Q96M19 166 aa13.18□□□□□ -0.3
HSPG2-208ENST00000471322 AGPAT4-IT1Q9H0P7 198 aa13.18□□□□□ -0.3
HSPG2-208ENST00000471322 LENEPQ9Y5L5 61 aa13.18□□□□□ -0.3
HSPG2-208ENST00000471322 MEGF8Q7Z7M0 2845 aa13.18□□□□□ -0.3
HSPG2-208ENST00000471322 UBE2CO00762 179 aa13.17□□□□□ -0.3
HSPG2-208ENST00000471322 FOXA3P55318 350 aaPredicted RBP13.17□□□□□ -0.3
HSPG2-208ENST00000471322 NDUFA6P56556 154 aa13.17□□□□□ -0.3
HSPG2-208ENST00000471322 ERCC8Q13216 396 aa13.17□□□□□ -0.3
HSPG2-208ENST00000471322 RBPMS2Q6ZRY4 209 aaKnown RBP13.17□□□□□ -0.3
HSPG2-208ENST00000471322 C2orf70A6NJV1 201 aa13.17□□□□□ -0.3
HSPG2-208ENST00000471322 PF4P02776 101 aa13.17□□□□□ -0.3
HSPG2-208ENST00000471322 CBLN1P23435 193 aa13.17□□□□□ -0.3
HSPG2-208ENST00000471322 RPS20P60866 119 aaKnown RBP13.17□□□□□ -0.3
HSPG2-208ENST00000471322 Q6AWC8 147 aa13.17□□□□□ -0.3
HSPG2-208ENST00000471322 OR11H1Q8NG94 326 aa13.17□□□□□ -0.3
HSPG2-208ENST00000471322 OR10J6PQ8NGY7 276 aa13.17□□□□□ -0.3
HSPG2-208ENST00000471322 Q8TAT8 98 aa13.17□□□□□ -0.3
HSPG2-208ENST00000471322 PEMTQ9UBM1 199 aa13.17□□□□□ -0.3
HSPG2-208ENST00000471322 FABP5P3A8MUU1 101 aa13.16□□□□□ -0.3
HSPG2-208ENST00000471322 SNURFLB1AK76 121 aa13.16□□□□□ -0.3
HSPG2-208ENST00000471322 SPINK4O60575 86 aa13.16□□□□□ -0.3
HSPG2-208ENST00000471322 SH2D1AO60880 128 aa13.16□□□□□ -0.3
HSPG2-208ENST00000471322 HLA-DQA1P01909 254 aa13.16□□□□□ -0.3
HSPG2-208ENST00000471322 PRB4P10163 310 aaPredicted RBP13.16□□□□□ -0.3
HSPG2-208ENST00000471322 C20orf173Q96LM9 149 aa13.16□□□□□ -0.3
HSPG2-208ENST00000471322 ASCL2Q99929 193 aa13.16□□□□□ -0.3
HSPG2-208ENST00000471322 MRPL18Q9H0U6 180 aaKnown RBP13.16□□□□□ -0.3
HSPG2-208ENST00000471322 TMEM189A5PLL7 270 aa13.15□□□□□ -0.3
HSPG2-208ENST00000471322 HOXA5P20719 270 aa13.15□□□□□ -0.3
HSPG2-208ENST00000471322 MRPL54Q6P161 138 aaKnown RBP13.15□□□□□ -0.3
HSPG2-208ENST00000471322 GTSF1Q8WW33 167 aa13.15□□□□□ -0.3
HSPG2-208ENST00000471322 TMEM136Q6ZRR5 245 aa13.14□□□□□ -0.31
HSPG2-208ENST00000471322 DCANP1Q8TF63 244 aa13.14□□□□□ -0.31
HSPG2-208ENST00000471322 RAX2Q96IS3 184 aa13.14□□□□□ -0.31
HSPG2-208ENST00000471322 GPR61Q9BZJ8 451 aa13.14□□□□□ -0.31
HSPG2-208ENST00000471322 SLURP1P55000 103 aa13.13□□□□□ -0.31
HSPG2-208ENST00000471322 RAB4BP61018 213 aa13.13□□□□□ -0.31
HSPG2-208ENST00000471322 MS4A6AQ9H2W1 248 aa13.13□□□□□ -0.31
HSPG2-208ENST00000471322 IGKV3-7A0A075B6H7 116 aa13.13□□□□□ -0.31
HSPG2-208ENST00000471322 TRBV7-9A0A0J9YWB2 115 aa13.13□□□□□ -0.31
HSPG2-208ENST00000471322 CCL24O00175 119 aa13.13□□□□□ -0.31
HSPG2-208ENST00000471322 EDN2P20800 178 aa13.13□□□□□ -0.31
HSPG2-208ENST00000471322 PAFAH1B2P68402 229 aa13.13□□□□□ -0.31
HSPG2-208ENST00000471322 HIST1H1AQ02539 215 aaPredicted RBP13.13□□□□□ -0.31
HSPG2-208ENST00000471322 COA6Q5JTJ3 125 aaKnown RBP13.13□□□□□ -0.31
HSPG2-208ENST00000471322 PGLYRP4Q96LB8 373 aa13.13□□□□□ -0.31
HSPG2-208ENST00000471322 A0A1B0GXF2 115 aa13.12□□□□□ -0.31
HSPG2-208ENST00000471322 SNRPD3P62318 126 aaKnown RBP13.12□□□□□ -0.31
HSPG2-208ENST00000471322 HBBP68871 147 aa13.12□□□□□ -0.31
HSPG2-208ENST00000471322 OR8A1Q8NGG7 326 aa13.12□□□□□ -0.31
HSPG2-208ENST00000471322 OR9G4Q8NGQ1 327 aa13.12□□□□□ -0.31
HSPG2-208ENST00000471322 A0A1B0GW15 77 aa13.11□□□□□ -0.31
HSPG2-208ENST00000471322 S100A8P05109 93 aa13.11□□□□□ -0.31
HSPG2-208ENST00000471322 CD33P20138 364 aa13.11□□□□□ -0.31
HSPG2-208ENST00000471322 ZNF80P51504 273 aaPredicted RBP13.11□□□□□ -0.31
HSPG2-208ENST00000471322 BORCS7Q96B45 105 aa13.11□□□□□ -0.31
HSPG2-208ENST00000471322 G3V4G9 280 aa13.1□□□□□ -0.31
HSPG2-208ENST00000471322 APCSP02743 223 aa13.1□□□□□ -0.31
HSPG2-208ENST00000471322 FRMD6-AS1P0C7T7 363 aa13.1□□□□□ -0.31
HSPG2-208ENST00000471322 RIGQ13278 110 aa13.1□□□□□ -0.31
HSPG2-208ENST00000471322 OXLD1Q5BKU9 147 aa13.1□□□□□ -0.31
HSPG2-208ENST00000471322 A0A1B0GUT8 65 aa13.1□□□□□ -0.31
HSPG2-208ENST00000471322 K7EQG2 157 aa13.1□□□□□ -0.31
HSPG2-208ENST00000471322 GZMBP10144 247 aa13.1□□□□□ -0.31
HSPG2-208ENST00000471322 AKR1D1P51857 326 aa13.1□□□□□ -0.31
HSPG2-208ENST00000471322 WFDC3Q8IUB2 231 aa13.1□□□□□ -0.31
HSPG2-208ENST00000471322 TRAV2A0A0B4J234 112 aa13.09□□□□□ -0.31
HSPG2-208ENST00000471322 ORM1P02763 201 aa13.09□□□□□ -0.31
HSPG2-208ENST00000471322 IGLL1P15814 213 aa13.09□□□□□ -0.31
HSPG2-208ENST00000471322 CAMPP49913 170 aa13.09□□□□□ -0.31
HSPG2-208ENST00000471322 LINC01559Q495D7 138 aa13.09□□□□□ -0.31
HSPG2-208ENST00000471322 LINC00482Q8N8I6 264 aa13.09□□□□□ -0.31
HSPG2-208ENST00000471322 DLX4Q92988 240 aaPredicted RBP13.09□□□□□ -0.31
HSPG2-208ENST00000471322 FHL3Q13643 280 aa13.08□□□□□ -0.32
HSPG2-208ENST00000471322 CRISP2P16562 243 aa13.07□□□□□ -0.32
HSPG2-208ENST00000471322 ADAMTSL5Q6ZMM2 481 aa13.07□□□□□ -0.32
HSPG2-208ENST00000471322 CSN3P07498 182 aa13.06□□□□□ -0.32
HSPG2-208ENST00000471322 ZNF705DP0CH99 300 aaPredicted RBP13.06□□□□□ -0.32
HSPG2-208ENST00000471322 ZNF705BP0CI00 300 aaPredicted RBP13.06□□□□□ -0.32
HSPG2-208ENST00000471322 S100A2P29034 98 aa13.06□□□□□ -0.32
HSPG2-208ENST00000471322 TFPI2P48307 235 aa13.06□□□□□ -0.32
HSPG2-208ENST00000471322 HIST3H2BBQ8N257 126 aa13.06□□□□□ -0.32
HSPG2-208ENST00000471322 FAM19A4Q96LR4 140 aa13.06□□□□□ -0.32
HSPG2-208ENST00000471322 SELENOKQ9Y6D0 94 aa13.06□□□□□ -0.32
HSPG2-208ENST00000471322 TMSB15BA0A087X1C1 80 aa13.06□□□□□ -0.32
HSPG2-208ENST00000471322 Q0VG73 95 aa13.06□□□□□ -0.32
HSPG2-208ENST00000471322 PSMG4Q5JS54 123 aa13.06□□□□□ -0.32
HSPG2-208ENST00000471322 GDF5OSQ5U4N7 250 aa13.06□□□□□ -0.32
HSPG2-208ENST00000471322 FER1L6-AS1Q8NA97 138 aa13.06□□□□□ -0.32
HSPG2-208ENST00000471322 WFDC9Q8NEX5 89 aa13.06□□□□□ -0.32
HSPG2-208ENST00000471322 DYNLRB2Q8TF09 96 aa13.06□□□□□ -0.32
HSPG2-208ENST00000471322 ODF3Q96PU9 254 aa13.06□□□□□ -0.32
HSPG2-208ENST00000471322 TRAV21A0A0B4J279 112 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms