RNA–Protein interactions for RNA: ENST00000470998.1

HDAC8-216, Transcript of histone deacetylase 8, humanhuman

TSL 3

Gene HDAC8, Length 329 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-216ENST00000470998 SH2D7A6NKC9 451 aaPredicted RBP4.35□□□□□ -1.71
HDAC8-216ENST00000470998 PCP4L1A6NKN8 68 aa4.35□□□□□ -1.71
HDAC8-216ENST00000470998 CHEK1O14757 476 aa4.35□□□□□ -1.71
HDAC8-216ENST00000470998 ZNF324O75467 553 aaPredicted RBP4.35□□□□□ -1.71
HDAC8-216ENST00000470998 SERF1AO75920 110 aa4.35□□□□□ -1.71
HDAC8-216ENST00000470998 TRGV3P03979 118 aa4.35□□□□□ -1.71
HDAC8-216ENST00000470998 CLEC3BP05452 202 aa4.35□□□□□ -1.71
HDAC8-216ENST00000470998 OR5AL1P0C617 328 aa4.35□□□□□ -1.71
HDAC8-216ENST00000470998 IGHV4-38-2P0DP08 117 aa4.35□□□□□ -1.71
HDAC8-216ENST00000470998 SRIP30626 198 aa4.35□□□□□ -1.71
HDAC8-216ENST00000470998 CTRLP40313 264 aa4.35□□□□□ -1.71
HDAC8-216ENST00000470998 TCL1AP56279 114 aa4.35□□□□□ -1.71
HDAC8-216ENST00000470998 Q6YL49 198 aa4.35□□□□□ -1.71
HDAC8-216ENST00000470998 PRNTQ86SH4 94 aa4.35□□□□□ -1.71
HDAC8-216ENST00000470998 EXOC3-AS1Q8N2X6 119 aa4.35□□□□□ -1.71
HDAC8-216ENST00000470998 PIFOQ8TCI5 191 aa4.35□□□□□ -1.71
HDAC8-216ENST00000470998 PRR25Q96S07 402 aa4.35□□□□□ -1.71
HDAC8-216ENST00000470998 ASCL2Q99929 193 aa4.35□□□□□ -1.71
HDAC8-216ENST00000470998 KRTAP4-9Q9BYQ8 210 aa4.35□□□□□ -1.71
HDAC8-216ENST00000470998 GNB4Q9HAV0 340 aa4.35□□□□□ -1.71
HDAC8-216ENST00000470998 TET2Q6N021 2002 aaPredicted RBP4.34□□□□□ -1.71
HDAC8-216ENST00000470998 TNCP24821 2201 aa4.34□□□□□ -1.71
HDAC8-216ENST00000470998 SVEP1Q4LDE5 3571 aa4.34□□□□□ -1.71
HDAC8-216ENST00000470998 KIR2DL5BA0A0G2JN68 375 aa4.34□□□□□ -1.71
HDAC8-216ENST00000470998 KIR2DL5BA0A0G2JPC4 375 aa4.34□□□□□ -1.71
HDAC8-216ENST00000470998 ZNF785A8K8V0 405 aa4.34□□□□□ -1.71
HDAC8-216ENST00000470998 F2Z2F3 143 aa4.34□□□□□ -1.71
HDAC8-216ENST00000470998 H3BUX3 64 aa4.34□□□□□ -1.71
HDAC8-216ENST00000470998 K7EMT4 169 aa4.34□□□□□ -1.71
HDAC8-216ENST00000470998 HSBP1O75506 76 aa4.34□□□□□ -1.71
HDAC8-216ENST00000470998 NDUFA7O95182 113 aa4.34□□□□□ -1.71
HDAC8-216ENST00000470998 GPX1P07203 203 aa4.34□□□□□ -1.71
HDAC8-216ENST00000470998 PPIFP30405 207 aaKnown RBP4.34□□□□□ -1.71
HDAC8-216ENST00000470998 ARL3P36405 182 aa4.34□□□□□ -1.71
HDAC8-216ENST00000470998 AMTP48728 403 aa4.34□□□□□ -1.71
HDAC8-216ENST00000470998 CTAG1AP78358 180 aa4.34□□□□□ -1.71
HDAC8-216ENST00000470998 DEFA6Q01524 100 aa4.34□□□□□ -1.71
HDAC8-216ENST00000470998 HIST1H1AQ02539 215 aaPredicted RBP4.34□□□□□ -1.71
HDAC8-216ENST00000470998 SLAQ13239 276 aa4.34□□□□□ -1.71
HDAC8-216ENST00000470998 FOXE3Q13461 319 aa4.34□□□□□ -1.71
HDAC8-216ENST00000470998 PMCHL1Q16048 86 aa4.34□□□□□ -1.71
HDAC8-216ENST00000470998 DEFB112Q30KQ8 113 aa4.34□□□□□ -1.71
HDAC8-216ENST00000470998 TMEM78Q5T7P6 136 aa4.34□□□□□ -1.71
HDAC8-216ENST00000470998 CLEC19AQ6UXS0 136 aa4.34□□□□□ -1.71
HDAC8-216ENST00000470998 ZNF493Q6ZR52 646 aa4.34□□□□□ -1.71
HDAC8-216ENST00000470998 Q6ZSN1 163 aa4.34□□□□□ -1.71
HDAC8-216ENST00000470998 KIR2DL5AQ8N109 375 aa4.34□□□□□ -1.71
HDAC8-216ENST00000470998 C18orf32Q8TCD1 76 aa4.34□□□□□ -1.71
HDAC8-216ENST00000470998 GTSF1Q8WW33 167 aa4.34□□□□□ -1.71
HDAC8-216ENST00000470998 ZC2HC1AQ96GY0 325 aa4.34□□□□□ -1.71
HDAC8-216ENST00000470998 ALKBH7Q9BT30 221 aaPredicted RBP4.34□□□□□ -1.71
HDAC8-216ENST00000470998 CNFNQ9BYD5 112 aa4.34□□□□□ -1.71
HDAC8-216ENST00000470998 NAGKQ9UJ70 344 aa4.34□□□□□ -1.71
HDAC8-216ENST00000470998 LAMTOR2Q9Y2Q5 125 aa4.34□□□□□ -1.71
HDAC8-216ENST00000470998 DOCK11Q5JSL3 2073 aa4.33□□□□□ -1.72
HDAC8-216ENST00000470998 LOC102724200A0A096LPH7 203 aaPredicted RBP4.33□□□□□ -1.72
HDAC8-216ENST00000470998 TRAV8-1A0A0A6YYK1 113 aa4.33□□□□□ -1.72
HDAC8-216ENST00000470998 CLPSL1A2RUU4 121 aa4.33□□□□□ -1.72
HDAC8-216ENST00000470998 GRIFINA4D1Z8 144 aa4.33□□□□□ -1.72
HDAC8-216ENST00000470998 TMEM189A5PLL7 270 aa4.33□□□□□ -1.72
HDAC8-216ENST00000470998 FABP5P3A8MUU1 101 aa4.33□□□□□ -1.72
HDAC8-216ENST00000470998 M0R3E3 92 aa4.33□□□□□ -1.72
HDAC8-216ENST00000470998 OVOL1O14753 267 aa4.33□□□□□ -1.72
HDAC8-216ENST00000470998 HOXA3O43365 443 aaPredicted RBP4.33□□□□□ -1.72
HDAC8-216ENST00000470998 CA1P00915 261 aaPredicted RBP4.33□□□□□ -1.72
HDAC8-216ENST00000470998 APOHP02749 345 aaPredicted RBP4.33□□□□□ -1.72
HDAC8-216ENST00000470998 PPBPP02775 128 aa4.33□□□□□ -1.72
HDAC8-216ENST00000470998 DDTP30046 118 aa4.33□□□□□ -1.72
HDAC8-216ENST00000470998 ZNF138P52744 262 aa4.33□□□□□ -1.72
HDAC8-216ENST00000470998 SLC35B1P78383 322 aa4.33□□□□□ -1.72
HDAC8-216ENST00000470998 CFHR3Q02985 330 aa4.33□□□□□ -1.72
HDAC8-216ENST00000470998 PSMG4Q5JS54 123 aa4.33□□□□□ -1.72
HDAC8-216ENST00000470998 LCN12Q6JVE5 192 aa4.33□□□□□ -1.72
HDAC8-216ENST00000470998 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.33□□□□□ -1.72
HDAC8-216ENST00000470998 TEX43Q6ZNM6 134 aa4.33□□□□□ -1.72
HDAC8-216ENST00000470998 C9orf47Q6ZRZ4 202 aa4.33□□□□□ -1.72
HDAC8-216ENST00000470998 TMEM256Q8N2U0 113 aa4.33□□□□□ -1.72
HDAC8-216ENST00000470998 GLMPQ8WWB7 406 aa4.33□□□□□ -1.72
HDAC8-216ENST00000470998 DUX5Q96PT3 197 aa4.33□□□□□ -1.72
HDAC8-216ENST00000470998 C20orf144Q9BQM9 153 aa4.33□□□□□ -1.72
HDAC8-216ENST00000470998 KRTAP9-3Q9BYQ3 159 aa4.33□□□□□ -1.72
HDAC8-216ENST00000470998 NPFFR1Q9GZQ6 430 aa4.33□□□□□ -1.72
HDAC8-216ENST00000470998 DAZ1Q9NQZ3 744 aaKnown RBP4.33□□□□□ -1.72
HDAC8-216ENST00000470998 VPREB3Q9UKI3 123 aa4.33□□□□□ -1.72
HDAC8-216ENST00000470998 TP53TG3Q9ULZ0 132 aa4.33□□□□□ -1.72
HDAC8-216ENST00000470998 UFC1Q9Y3C8 167 aa4.33□□□□□ -1.72
HDAC8-216ENST00000470998 IGHV3OR16-10A0A075B7F0 116 aa4.32□□□□□ -1.72
HDAC8-216ENST00000470998 G3V318 75 aa4.32□□□□□ -1.72
HDAC8-216ENST00000470998 H3BTX0 84 aa4.32□□□□□ -1.72
HDAC8-216ENST00000470998 SH2D1AO60880 128 aa4.32□□□□□ -1.72
HDAC8-216ENST00000470998 SCGB1D1O95968 90 aa4.32□□□□□ -1.72
HDAC8-216ENST00000470998 IGHG4P01861 327 aa4.32□□□□□ -1.72
HDAC8-216ENST00000470998 ELANEP08246 267 aa4.32□□□□□ -1.72
HDAC8-216ENST00000470998 CAMPP49913 170 aa4.32□□□□□ -1.72
HDAC8-216ENST00000470998 FAM106AQ4KMX7 169 aa4.32□□□□□ -1.72
HDAC8-216ENST00000470998 LCE5AQ5TCM9 118 aa4.32□□□□□ -1.72
HDAC8-216ENST00000470998 BRD3OSQ6XYD6 125 aa4.32□□□□□ -1.72
HDAC8-216ENST00000470998 LINC00322Q6ZN03 302 aaPredicted RBP4.32□□□□□ -1.72
HDAC8-216ENST00000470998 TCF24Q7RTU0 167 aa4.32□□□□□ -1.72
HDAC8-216ENST00000470998 TMEM219Q86XT9 240 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 106.9 ms