RNA–Protein interactions for RNA: ENST00000461347.5

NCL-207, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 3,967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-207ENST00000461347 ZNF56Q15929 161 aa11.37□□□□□ -0.59
NCL-207ENST00000461347 LINC00574Q9H8X3 128 aa11.37□□□□□ -0.59
NCL-207ENST00000461347 C2CD3Q4AC94 2353 aa11.37□□□□□ -0.59
NCL-207ENST00000461347 K7EP34 96 aa11.37□□□□□ -0.59
NCL-207ENST00000461347 LGALS3P17931 250 aaKnown RBP11.37□□□□□ -0.59
NCL-207ENST00000461347 ID1P41134 155 aa11.36□□□□□ -0.59
NCL-207ENST00000461347 C14orf178Q8N769 122 aaPredicted RBP11.36□□□□□ -0.59
NCL-207ENST00000461347 ZNF256Q9Y2P7 627 aaPredicted RBP11.36□□□□□ -0.59
NCL-207ENST00000461347 SRD5A1P18405 259 aa11.36□□□□□ -0.59
NCL-207ENST00000461347 ORMDL2Q53FV1 153 aa11.36□□□□□ -0.59
NCL-207ENST00000461347 ADAMTSL5Q6ZMM2 481 aa11.36□□□□□ -0.59
NCL-207ENST00000461347 MRPL35Q9NZE8 188 aaKnown RBP11.36□□□□□ -0.59
NCL-207ENST00000461347 VPS13AQ96RL7 3174 aa11.36□□□□□ -0.59
NCL-207ENST00000461347 GAGE13Q4V321 117 aa11.36□□□□□ -0.59
NCL-207ENST00000461347 SPATA12Q7Z6I5 190 aa11.36□□□□□ -0.59
NCL-207ENST00000461347 SORL1Q92673 2214 aa11.36□□□□□ -0.59
NCL-207ENST00000461347 G3V318 75 aa11.35□□□□□ -0.59
NCL-207ENST00000461347 BEX4Q9NWD9 120 aaPredicted RBP11.35□□□□□ -0.59
NCL-207ENST00000461347 TRAV21A0A0B4J279 112 aa11.35□□□□□ -0.59
NCL-207ENST00000461347 A0A1W2PPM0 123 aa11.35□□□□□ -0.59
NCL-207ENST00000461347 IGLV1-47P01700 117 aa11.35□□□□□ -0.59
NCL-207ENST00000461347 PAX8Q06710 450 aa11.35□□□□□ -0.59
NCL-207ENST00000461347 PIP4P1Q86T03 277 aa11.35□□□□□ -0.59
NCL-207ENST00000461347 DTX2Q86UW9 622 aa11.35□□□□□ -0.59
NCL-207ENST00000461347 SHISA9B4DS77 424 aa11.35□□□□□ -0.59
NCL-207ENST00000461347 EFNA4P52798 201 aa11.35□□□□□ -0.59
NCL-207ENST00000461347 EMP1P54849 157 aa11.35□□□□□ -0.59
NCL-207ENST00000461347 DGAT2L7PQ6IED9 249 aa11.35□□□□□ -0.59
NCL-207ENST00000461347 CUL9Q8IWT3 2517 aa11.35□□□□□ -0.59
NCL-207ENST00000461347 HOXA3O43365 443 aaPredicted RBP11.35□□□□□ -0.59
NCL-207ENST00000461347 ETDBQ3ZM63 59 aa11.34□□□□□ -0.59
NCL-207ENST00000461347 DYNAPQ8N1N2 210 aa11.34□□□□□ -0.59
NCL-207ENST00000461347 M0R1W7 72 aa11.34□□□□□ -0.59
NCL-207ENST00000461347 ADAMTS20P59510 1910 aa11.34□□□□□ -0.59
NCL-207ENST00000461347 K7EMI3 77 aa11.34□□□□□ -0.59
NCL-207ENST00000461347 NPIPB6E9PJ23 425 aa11.33□□□□□ -0.6
NCL-207ENST00000461347 ATP6V0E1O15342 81 aa11.33□□□□□ -0.6
NCL-207ENST00000461347 LINC01559Q495D7 138 aa11.33□□□□□ -0.6
NCL-207ENST00000461347 MYCNOSP40205 109 aa11.33□□□□□ -0.6
NCL-207ENST00000461347 DPF1Q92782 380 aa11.33□□□□□ -0.6
NCL-207ENST00000461347 SPRY2O43597 315 aa11.32□□□□□ -0.6
NCL-207ENST00000461347 PLNP26678 52 aa11.32□□□□□ -0.6
NCL-207ENST00000461347 RUSC1-AS1Q66K80 236 aa11.32□□□□□ -0.6
NCL-207ENST00000461347 AMTNQ6UX39 209 aa11.32□□□□□ -0.6
NCL-207ENST00000461347 H7C1H1 209 aa11.32□□□□□ -0.6
NCL-207ENST00000461347 CEACAM4O75871 244 aa11.32□□□□□ -0.6
NCL-207ENST00000461347 CD7P09564 240 aa11.32□□□□□ -0.6
NCL-207ENST00000461347 GRNP28799 593 aaKnown RBP11.32□□□□□ -0.6
NCL-207ENST00000461347 MINOS1Q5TGZ0 78 aa11.32□□□□□ -0.6
NCL-207ENST00000461347 Q8N8P6 123 aa11.32□□□□□ -0.6
NCL-207ENST00000461347 MINOS1-NBL1R4GNA1 71 aa11.32□□□□□ -0.6
NCL-207ENST00000461347 PPP1R17O96001 155 aa11.32□□□□□ -0.6
NCL-207ENST00000461347 OOSP1A8MZH6 123 aa11.31□□□□□ -0.6
NCL-207ENST00000461347 AZU1P20160 251 aa11.31□□□□□ -0.6
NCL-207ENST00000461347 SAA4P35542 130 aa11.31□□□□□ -0.6
NCL-207ENST00000461347 URB1-AS1Q96HZ7 61 aa11.31□□□□□ -0.6
NCL-207ENST00000461347 PGPEP1Q9NXJ5 209 aa11.31□□□□□ -0.6
NCL-207ENST00000461347 SYT8Q8NBV8 401 aa11.3□□□□□ -0.6
NCL-207ENST00000461347 WNK1Q9H4A3 2382 aa11.3□□□□□ -0.6
NCL-207ENST00000461347 TRAV41A0A0B4J266 112 aa11.3□□□□□ -0.6
NCL-207ENST00000461347 CELSR3Q9NYQ7 3312 aa11.3□□□□□ -0.6
NCL-207ENST00000461347 H3BMG7 143 aa11.3□□□□□ -0.6
NCL-207ENST00000461347 PTPN13Q12923 2485 aa11.3□□□□□ -0.6
NCL-207ENST00000461347 FXYD2P54710 66 aa11.29□□□□□ -0.6
NCL-207ENST00000461347 KLRB1Q12918 225 aa11.29□□□□□ -0.6
NCL-207ENST00000461347 BRD3OSQ6XYD6 125 aa11.29□□□□□ -0.6
NCL-207ENST00000461347 CFHR4Q92496 578 aa11.29□□□□□ -0.6
NCL-207ENST00000461347 AGPAT4-IT1Q9H0P7 198 aa11.29□□□□□ -0.6
NCL-207ENST00000461347 DPH3P1Q9H4G8 78 aa11.29□□□□□ -0.6
NCL-207ENST00000461347 TRBV25-1A0A075B6N4 114 aa11.29□□□□□ -0.6
NCL-207ENST00000461347 CRXO43186 299 aaPredicted RBP11.29□□□□□ -0.6
NCL-207ENST00000461347 BOD1L2Q8IYS8 172 aa11.29□□□□□ -0.6
NCL-207ENST00000461347 IGHV3-64A0A075B6Q5 118 aa11.29□□□□□ -0.6
NCL-207ENST00000461347 SIVA1O15304 175 aa11.29□□□□□ -0.6
NCL-207ENST00000461347 C8orf86Q6ZUL3 223 aa11.29□□□□□ -0.6
NCL-207ENST00000461347 C9orf139Q6ZV77 190 aa11.29□□□□□ -0.6
NCL-207ENST00000461347 PRAC2D3DTV9 90 aa11.28□□□□□ -0.6
NCL-207ENST00000461347 TSSC4Q9Y5U2 329 aaPredicted RBP11.28□□□□□ -0.6
NCL-207ENST00000461347 IGLV11-55A0A075B6I3 123 aa11.28□□□□□ -0.6
NCL-207ENST00000461347 RPL13AP40429 203 aaKnown RBP11.28□□□□□ -0.6
NCL-207ENST00000461347 FOXE3Q13461 319 aa11.28□□□□□ -0.6
NCL-207ENST00000461347 TEX48A0A1B0GUV7 120 aa11.27□□□□□ -0.6
NCL-207ENST00000461347 CTSGP08311 255 aa11.27□□□□□ -0.6
NCL-207ENST00000461347 SUMO2P61956 95 aaKnown RBP11.27□□□□□ -0.6
NCL-207ENST00000461347 C2orf66Q6UXQ4 117 aa11.27□□□□□ -0.6
NCL-207ENST00000461347 FAM110DQ8TAY7 271 aaPredicted RBP11.27□□□□□ -0.6
NCL-207ENST00000461347 NPFFR1Q9GZQ6 430 aa11.27□□□□□ -0.6
NCL-207ENST00000461347 NACAE9PAV3 2078 aa11.27□□□□□ -0.61
NCL-207ENST00000461347 CRIP1P50238 77 aa11.27□□□□□ -0.61
NCL-207ENST00000461347 UCNP55089 124 aa11.27□□□□□ -0.61
NCL-207ENST00000461347 C7orf69Q9H7B7 122 aa11.27□□□□□ -0.61
NCL-207ENST00000461347 NCOR2Q9Y618 2525 aa11.27□□□□□ -0.61
NCL-207ENST00000461347 Q71RC1 249 aaPredicted RBP11.27□□□□□ -0.61
NCL-207ENST00000461347 NEGR1Q7Z3B1 354 aa11.27□□□□□ -0.61
NCL-207ENST00000461347 OVOL1O14753 267 aa11.26□□□□□ -0.61
NCL-207ENST00000461347 ANKRD11Q6UB99 2663 aaPredicted RBP11.26□□□□□ -0.61
NCL-207ENST00000461347 ZNF80P51504 273 aaPredicted RBP11.26□□□□□ -0.61
NCL-207ENST00000461347 CEND1Q8N111 149 aa11.26□□□□□ -0.61
NCL-207ENST00000461347 MYO9AB2RTY4 2548 aa11.26□□□□□ -0.61
NCL-207ENST00000461347 TRAV26-1A0A087WT03 109 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms