RNA–Protein interactions for RNA: ENST00000443896.5

PIKFYVE-206, Transcript of phosphoinositide kinase, FYVE-type zinc finger containing, humanhuman

TSL 1 (best)

Gene PIKFYVE, Length 3,282 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIKFYVE-206ENST00000443896 SHISA2Q6UWI4 295 aa12.57□□□□□ -0.4
PIKFYVE-206ENST00000443896 CCL19Q99731 98 aa12.57□□□□□ -0.4
PIKFYVE-206ENST00000443896 PKD1L2Q7Z442 2459 aa12.57□□□□□ -0.4
PIKFYVE-206ENST00000443896 IGHV4-61A0A0C4DH41 118 aa12.57□□□□□ -0.4
PIKFYVE-206ENST00000443896 TMEM8BA6NDV4 472 aa12.57□□□□□ -0.4
PIKFYVE-206ENST00000443896 CLEC3BP05452 202 aa12.57□□□□□ -0.4
PIKFYVE-206ENST00000443896 LOXL1Q08397 574 aaPredicted RBP12.57□□□□□ -0.4
PIKFYVE-206ENST00000443896 C8orf49Q96NF6 230 aa12.57□□□□□ -0.4
PIKFYVE-206ENST00000443896 SFTA2Q6UW10 78 aa12.57□□□□□ -0.4
PIKFYVE-206ENST00000443896 C10orf105Q8TEF2 133 aa12.57□□□□□ -0.4
PIKFYVE-206ENST00000443896 CCDC140Q96MF4 163 aa12.57□□□□□ -0.4
PIKFYVE-206ENST00000443896 IGHV1-69DA0A0B4J2H0 117 aa12.56□□□□□ -0.4
PIKFYVE-206ENST00000443896 IGHV3-35A0A0C4DH35 117 aa12.56□□□□□ -0.4
PIKFYVE-206ENST00000443896 IGHV1-69P01742 117 aa12.56□□□□□ -0.4
PIKFYVE-206ENST00000443896 FXYD2P54710 66 aa12.56□□□□□ -0.4
PIKFYVE-206ENST00000443896 COX8CQ7Z4L0 72 aa12.56□□□□□ -0.4
PIKFYVE-206ENST00000443896 C20orf78Q9BR46 151 aa12.56□□□□□ -0.4
PIKFYVE-206ENST00000443896 CACNG7P62955 275 aa12.56□□□□□ -0.4
PIKFYVE-206ENST00000443896 PET117Q6UWS5 81 aa12.56□□□□□ -0.4
PIKFYVE-206ENST00000443896 MS4A6AQ9H2W1 248 aa12.56□□□□□ -0.4
PIKFYVE-206ENST00000443896 NHP2Q9NX24 153 aaKnown RBP12.56□□□□□ -0.4
PIKFYVE-206ENST00000443896 IGHV3OR16-8A0A075B7F1 116 aa12.56□□□□□ -0.4
PIKFYVE-206ENST00000443896 CT45A10P0DMU9 189 aa12.56□□□□□ -0.4
PIKFYVE-206ENST00000443896 OR5A1Q8NGJ0 315 aa12.56□□□□□ -0.4
PIKFYVE-206ENST00000443896 MOB4Q9Y3A3 225 aa12.56□□□□□ -0.4
PIKFYVE-206ENST00000443896 A0A1B0GUT8 65 aa12.55□□□□□ -0.4
PIKFYVE-206ENST00000443896 IGHG4P01861 327 aa12.55□□□□□ -0.4
PIKFYVE-206ENST00000443896 PIFOQ8TCI5 191 aa12.55□□□□□ -0.4
PIKFYVE-206ENST00000443896 IGHV3OR16-10A0A075B7F0 116 aa12.55□□□□□ -0.4
PIKFYVE-206ENST00000443896 IGKV2-40A0A087WW87 121 aaPredicted RBP12.55□□□□□ -0.4
PIKFYVE-206ENST00000443896 IGKV2D-40P01614 121 aaPredicted RBP12.55□□□□□ -0.4
PIKFYVE-206ENST00000443896 FGF6P10767 208 aa12.55□□□□□ -0.4
PIKFYVE-206ENST00000443896 NDFIP1Q9BT67 221 aa12.55□□□□□ -0.4
PIKFYVE-206ENST00000443896 AKAP6Q13023 2319 aa12.55□□□□□ -0.4
PIKFYVE-206ENST00000443896 TMEM219Q86XT9 240 aa12.54□□□□□ -0.4
PIKFYVE-206ENST00000443896 GATD1Q8NB37 220 aa12.54□□□□□ -0.4
PIKFYVE-206ENST00000443896 PRSS3P2Q8NHM4 247 aa12.54□□□□□ -0.4
PIKFYVE-206ENST00000443896 EEF1AKMT3Q96AZ1 226 aa12.54□□□□□ -0.4
PIKFYVE-206ENST00000443896 CACNA1AO00555 2505 aa12.54□□□□□ -0.4
PIKFYVE-206ENST00000443896 BUB3O43684 328 aa12.54□□□□□ -0.4
PIKFYVE-206ENST00000443896 FAM162BQ5T6X4 162 aa12.54□□□□□ -0.4
PIKFYVE-206ENST00000443896 Q6AWC8 147 aa12.54□□□□□ -0.4
PIKFYVE-206ENST00000443896 TRBV7-1A0A0A6YYK4 115 aa12.54□□□□□ -0.4
PIKFYVE-206ENST00000443896 ARMS2P0C7Q2 107 aa12.54□□□□□ -0.4
PIKFYVE-206ENST00000443896 SMIM13P0DJ93 91 aa12.54□□□□□ -0.4
PIKFYVE-206ENST00000443896 C19orf54Q5BKX5 351 aa12.54□□□□□ -0.4
PIKFYVE-206ENST00000443896 CLEC19AQ6UXS0 136 aa12.54□□□□□ -0.4
PIKFYVE-206ENST00000443896 ABCA2Q9BZC7 2435 aa12.54□□□□□ -0.4
PIKFYVE-206ENST00000443896 CLPSL1A2RUU4 121 aa12.53□□□□□ -0.4
PIKFYVE-206ENST00000443896 RIGQ13278 110 aa12.53□□□□□ -0.4
PIKFYVE-206ENST00000443896 RNF183Q96D59 192 aa12.53□□□□□ -0.4
PIKFYVE-206ENST00000443896 TRAV40A0A0B4J280 105 aa12.53□□□□□ -0.4
PIKFYVE-206ENST00000443896 CRIP2P52943 208 aaPredicted RBP12.53□□□□□ -0.4
PIKFYVE-206ENST00000443896 LINC01545Q5VT33 79 aa12.53□□□□□ -0.4
PIKFYVE-206ENST00000443896 PRR25Q96S07 402 aa12.53□□□□□ -0.4
PIKFYVE-206ENST00000443896 A0A1B0GW15 77 aa12.52□□□□□ -0.4
PIKFYVE-206ENST00000443896 SMIM17P0DL12 118 aa12.52□□□□□ -0.4
PIKFYVE-206ENST00000443896 BRD3OSQ6XYD6 125 aa12.52□□□□□ -0.4
PIKFYVE-206ENST00000443896 AP5S1Q9NUS5 200 aa12.52□□□□□ -0.41
PIKFYVE-206ENST00000443896 SH2D1AO60880 128 aa12.52□□□□□ -0.41
PIKFYVE-206ENST00000443896 HLA-DMBP28068 263 aa12.52□□□□□ -0.41
PIKFYVE-206ENST00000443896 IGFL4Q6B9Z1 124 aa12.52□□□□□ -0.41
PIKFYVE-206ENST00000443896 CHCHD1Q96BP2 118 aaKnown RBP12.52□□□□□ -0.41
PIKFYVE-206ENST00000443896 SPANXB1Q9NS25 103 aaPredicted RBP12.52□□□□□ -0.41
PIKFYVE-206ENST00000443896 PIEZO1Q92508 2521 aa12.51□□□□□ -0.41
PIKFYVE-206ENST00000443896 SMAD7O15105 426 aaKnown RBP12.51□□□□□ -0.41
PIKFYVE-206ENST00000443896 FCER1GP30273 86 aa12.51□□□□□ -0.41
PIKFYVE-206ENST00000443896 FA2HQ7L5A8 372 aa12.51□□□□□ -0.41
PIKFYVE-206ENST00000443896 VGLL1Q99990 258 aa12.51□□□□□ -0.41
PIKFYVE-206ENST00000443896 ZNF747Q9BV97 191 aa12.51□□□□□ -0.41
PIKFYVE-206ENST00000443896 TRAV41A0A0B4J266 112 aa12.51□□□□□ -0.41
PIKFYVE-206ENST00000443896 SCGB1A1P11684 91 aa12.51□□□□□ -0.41
PIKFYVE-206ENST00000443896 ATP5J2P56134 94 aa12.51□□□□□ -0.41
PIKFYVE-206ENST00000443896 MRAP2Q96G30 205 aa12.51□□□□□ -0.41
PIKFYVE-206ENST00000443896 VPS13CQ709C8 3753 aa12.5□□□□□ -0.41
PIKFYVE-206ENST00000443896 IGHV4-30-2A0A087WSY4 118 aa12.5□□□□□ -0.41
PIKFYVE-206ENST00000443896 TMEM189A5PLL7 270 aa12.5□□□□□ -0.41
PIKFYVE-206ENST00000443896 IFI27P40305 119 aaPredicted RBP12.5□□□□□ -0.41
PIKFYVE-206ENST00000443896 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.5□□□□□ -0.41
PIKFYVE-206ENST00000443896 SPINK8P0C7L1 97 aa12.5□□□□□ -0.41
PIKFYVE-206ENST00000443896 GLMPQ8WWB7 406 aa12.5□□□□□ -0.41
PIKFYVE-206ENST00000443896 MT-ATP8P03928 68 aa12.49□□□□□ -0.41
PIKFYVE-206ENST00000443896 IGHV4-38-2P0DP08 117 aa12.49□□□□□ -0.41
PIKFYVE-206ENST00000443896 Q8TAT8 98 aa12.49□□□□□ -0.41
PIKFYVE-206ENST00000443896 FAM223BA6NKX1 122 aa12.49□□□□□ -0.41
PIKFYVE-206ENST00000443896 B5MCH6 92 aa12.49□□□□□ -0.41
PIKFYVE-206ENST00000443896 FAM223AQ8IWN6 122 aa12.49□□□□□ -0.41
PIKFYVE-206ENST00000443896 DKK2Q9UBU2 259 aa12.49□□□□□ -0.41
PIKFYVE-206ENST00000443896 CFAP46Q8IYW2 2715 aa12.49□□□□□ -0.41
PIKFYVE-206ENST00000443896 J3QR89 54 aa12.49□□□□□ -0.41
PIKFYVE-206ENST00000443896 ZNF493Q6ZR52 646 aa12.49□□□□□ -0.41
PIKFYVE-206ENST00000443896 ZFHX3Q15911 3703 aa12.48□□□□□ -0.41
PIKFYVE-206ENST00000443896 COL12A1Q99715 3063 aa12.48□□□□□ -0.41
PIKFYVE-206ENST00000443896 AGRNO00468 2067 aa12.48□□□□□ -0.41
PIKFYVE-206ENST00000443896 SYT8Q8NBV8 401 aa12.48□□□□□ -0.41
PIKFYVE-206ENST00000443896 METTL26Q96S19 204 aa12.48□□□□□ -0.41
PIKFYVE-206ENST00000443896 SLC50A1Q9BRV3 221 aa12.48□□□□□ -0.41
PIKFYVE-206ENST00000443896 A0A1B0GWB2 263 aa12.48□□□□□ -0.41
PIKFYVE-206ENST00000443896 U3KQE9 123 aa12.48□□□□□ -0.41
PIKFYVE-206ENST00000443896 IGHV3-66A0A0C4DH42 116 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms