RNA–Protein interactions for RNA: ENST00000434813.3

CLK1-205, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 2,026 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-205ENST00000434813 PPP1R14DQ9NXH3 145 aa14.24□□□□□ -0.13
CLK1-205ENST00000434813 TIMM8BQ9Y5J9 83 aaPredicted RBP14.24□□□□□ -0.13
CLK1-205ENST00000434813 VPS13CQ709C8 3753 aa14.24□□□□□ -0.13
CLK1-205ENST00000434813 IGHV4-30-2A0A087WSY4 118 aa14.24□□□□□ -0.13
CLK1-205ENST00000434813 H0Y8G0 127 aa14.24□□□□□ -0.13
CLK1-205ENST00000434813 NPYP01303 97 aa14.24□□□□□ -0.13
CLK1-205ENST00000434813 ARL3P36405 182 aa14.24□□□□□ -0.13
CLK1-205ENST00000434813 C9orf47Q6ZRZ4 202 aa14.24□□□□□ -0.13
CLK1-205ENST00000434813 RNF185Q96GF1 192 aa14.24□□□□□ -0.13
CLK1-205ENST00000434813 MS4A6AQ9H2W1 248 aa14.24□□□□□ -0.13
CLK1-205ENST00000434813 H3BUA1 57 aa14.23□□□□□ -0.13
CLK1-205ENST00000434813 PPBPP02775 128 aa14.23□□□□□ -0.13
CLK1-205ENST00000434813 MCRIP2Q9BUT9 160 aaKnown RBP14.23□□□□□ -0.13
CLK1-205ENST00000434813 SCRT2Q9NQ03 307 aa14.23□□□□□ -0.13
CLK1-205ENST00000434813 IGKV3D-20A0A0C4DH25 116 aa14.22□□□□□ -0.13
CLK1-205ENST00000434813 HINT1P49773 126 aaPredicted RBP14.22□□□□□ -0.13
CLK1-205ENST00000434813 DSCR9P59020 149 aa14.22□□□□□ -0.13
CLK1-205ENST00000434813 C9orf139Q6ZV77 190 aa14.22□□□□□ -0.13
CLK1-205ENST00000434813 MSRB1Q9NZV6 116 aa14.22□□□□□ -0.13
CLK1-205ENST00000434813 A6NDX4 124 aa14.22□□□□□ -0.13
CLK1-205ENST00000434813 SMKR1H3BMG3 65 aa14.22□□□□□ -0.13
CLK1-205ENST00000434813 NCR2O95944 276 aa14.22□□□□□ -0.13
CLK1-205ENST00000434813 IGHG2P01859 326 aa14.22□□□□□ -0.13
CLK1-205ENST00000434813 HBDP02042 147 aa14.22□□□□□ -0.13
CLK1-205ENST00000434813 NDUFA4O00483 81 aa14.21□□□□□ -0.13
CLK1-205ENST00000434813 PPIFP30405 207 aaKnown RBP14.21□□□□□ -0.13
CLK1-205ENST00000434813 SLC25A34Q6PIV7 304 aa14.21□□□□□ -0.13
CLK1-205ENST00000434813 PMCHL2Q9BQD1 86 aa14.21□□□□□ -0.13
CLK1-205ENST00000434813 C11orf21Q9P2W6 132 aa14.21□□□□□ -0.13
CLK1-205ENST00000434813 C16orf92Q96LL3 132 aa14.2□□□□□ -0.14
CLK1-205ENST00000434813 TP73-AS1Q9UF72 201 aa14.2□□□□□ -0.14
CLK1-205ENST00000434813 H3BUX3 64 aa14.2□□□□□ -0.14
CLK1-205ENST00000434813 TCF21O43680 179 aa14.2□□□□□ -0.14
CLK1-205ENST00000434813 MSMBP08118 114 aa14.2□□□□□ -0.14
CLK1-205ENST00000434813 LY6EQ16553 131 aa14.2□□□□□ -0.14
CLK1-205ENST00000434813 PRSS57Q6UWY2 283 aa14.2□□□□□ -0.14
CLK1-205ENST00000434813 USMG5Q96IX5 58 aa14.2□□□□□ -0.14
CLK1-205ENST00000434813 NPFFR1Q9GZQ6 430 aa14.2□□□□□ -0.14
CLK1-205ENST00000434813 SPG11Q96JI7 2443 aa14.2□□□□□ -0.14
CLK1-205ENST00000434813 TRBV12-3P01733 135 aa14.19□□□□□ -0.14
CLK1-205ENST00000434813 UNQ9165/PRO28630Q6UXU0 137 aa14.19□□□□□ -0.14
CLK1-205ENST00000434813 LINC01546A6NGU7 62 aa14.19□□□□□ -0.14
CLK1-205ENST00000434813 OR8A1Q8NGG7 326 aa14.19□□□□□ -0.14
CLK1-205ENST00000434813 MAP1LC3AQ9H492 121 aa14.19□□□□□ -0.14
CLK1-205ENST00000434813 GOLT1BQ9Y3E0 138 aa14.19□□□□□ -0.14
CLK1-205ENST00000434813 LENEPQ9Y5L5 61 aa14.19□□□□□ -0.14
CLK1-205ENST00000434813 LGALS9BQ3B8N2 356 aa14.18□□□□□ -0.14
CLK1-205ENST00000434813 LGALS9CQ6DKI2 356 aa14.18□□□□□ -0.14
CLK1-205ENST00000434813 SMAD7O15105 426 aaKnown RBP14.17□□□□□ -0.14
CLK1-205ENST00000434813 NPSP0C0P6 89 aa14.17□□□□□ -0.14
CLK1-205ENST00000434813 ZNF124Q15973 351 aa14.17□□□□□ -0.14
CLK1-205ENST00000434813 IGHV7-4-1A0A0J9YVY3 117 aa14.17□□□□□ -0.14
CLK1-205ENST00000434813 SLC25A16P16260 332 aa14.17□□□□□ -0.14
CLK1-205ENST00000434813 FOXE3Q13461 319 aa14.17□□□□□ -0.14
CLK1-205ENST00000434813 GPHB5Q86YW7 130 aa14.17□□□□□ -0.14
CLK1-205ENST00000434813 DPF1Q92782 380 aa14.17□□□□□ -0.14
CLK1-205ENST00000434813 C20orf173Q96LM9 149 aa14.17□□□□□ -0.14
CLK1-205ENST00000434813 USP9YO00507 2555 aaPredicted RBP14.17□□□□□ -0.14
CLK1-205ENST00000434813 SOCS3O14543 225 aa14.16□□□□□ -0.14
CLK1-205ENST00000434813 ZNF738Q8NE65 137 aa14.16□□□□□ -0.14
CLK1-205ENST00000434813 CELSR2Q9HCU4 2923 aa14.15□□□□□ -0.14
CLK1-205ENST00000434813 B4DSR2 109 aa14.15□□□□□ -0.14
CLK1-205ENST00000434813 TNFRSF6BO95407 300 aa14.15□□□□□ -0.14
CLK1-205ENST00000434813 COX8AP10176 69 aa14.15□□□□□ -0.14
CLK1-205ENST00000434813 ORAOV1Q8WV07 137 aa14.15□□□□□ -0.14
CLK1-205ENST00000434813 IFI27L1Q96BM0 104 aa14.15□□□□□ -0.14
CLK1-205ENST00000434813 NXT2Q9NPJ8 142 aaKnown RBP14.15□□□□□ -0.14
CLK1-205ENST00000434813 IGHV4-4A0A075B6R2 117 aa14.14□□□□□ -0.15
CLK1-205ENST00000434813 SNAI2O43623 268 aa14.14□□□□□ -0.15
CLK1-205ENST00000434813 GAS8-AS1O95177 125 aa14.14□□□□□ -0.15
CLK1-205ENST00000434813 PRR9Q5T870 116 aa14.14□□□□□ -0.15
CLK1-205ENST00000434813 CSMD2Q7Z408 3487 aa14.14□□□□□ -0.15
CLK1-205ENST00000434813 IGLV1-40P01703 118 aa14.14□□□□□ -0.15
CLK1-205ENST00000434813 PF4V1P10720 104 aa14.14□□□□□ -0.15
CLK1-205ENST00000434813 FXYD7P58549 80 aa14.14□□□□□ -0.15
CLK1-205ENST00000434813 BLCAPP62952 87 aa14.14□□□□□ -0.15
CLK1-205ENST00000434813 CACNG7P62955 275 aa14.14□□□□□ -0.15
CLK1-205ENST00000434813 MPV17L2Q567V2 206 aa14.14□□□□□ -0.15
CLK1-205ENST00000434813 KLK15Q9H2R5 256 aa14.14□□□□□ -0.15
CLK1-205ENST00000434813 DOPEY2Q9Y3R5 2298 aa14.13□□□□□ -0.15
CLK1-205ENST00000434813 FBN2P35556 2912 aa14.13□□□□□ -0.15
CLK1-205ENST00000434813 OVOL1O14753 267 aa14.13□□□□□ -0.15
CLK1-205ENST00000434813 IGHV3-11P01762 117 aa14.13□□□□□ -0.15
CLK1-205ENST00000434813 OR4X2Q8NGF9 303 aa14.13□□□□□ -0.15
CLK1-205ENST00000434813 LINC00477Q96M19 166 aa14.13□□□□□ -0.15
CLK1-205ENST00000434813 CFHR3Q02985 330 aa14.12□□□□□ -0.15
CLK1-205ENST00000434813 COX11Q9Y6N1 276 aa14.12□□□□□ -0.15
CLK1-205ENST00000434813 MAP1AP78559 2803 aaPredicted RBP14.12□□□□□ -0.15
CLK1-205ENST00000434813 A0A0G2JLM5 398 aa14.12□□□□□ -0.15
CLK1-205ENST00000434813 C12orf54Q6X4T0 127 aa14.12□□□□□ -0.15
CLK1-205ENST00000434813 Q6ZQT7 251 aa14.12□□□□□ -0.15
CLK1-205ENST00000434813 SMIM15Q7Z3B0 74 aa14.12□□□□□ -0.15
CLK1-205ENST00000434813 OR10J6PQ8NGY7 276 aa14.12□□□□□ -0.15
CLK1-205ENST00000434813 ZNF580Q9UK33 172 aa14.12□□□□□ -0.15
CLK1-205ENST00000434813 EVI2AP22794 236 aa14.11□□□□□ -0.15
CLK1-205ENST00000434813 GATA3P23771 443 aa14.11□□□□□ -0.15
CLK1-205ENST00000434813 BVES-AS1Q5T3Y7 98 aa14.11□□□□□ -0.15
CLK1-205ENST00000434813 Q6ZS46 218 aa14.11□□□□□ -0.15
CLK1-205ENST00000434813 ZFAND2AQ8N6M9 145 aa14.11□□□□□ -0.15
CLK1-205ENST00000434813 OR1N2Q8NGR9 330 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms