RNA–Protein interactions for RNA: ENST00000434667.3

SCAF4-203, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 3,846 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-203ENST00000434667 CT83Q5H943 113 aa8.2□□□□□ -1.1
SCAF4-203ENST00000434667 PTH2Q96A98 100 aa8.2□□□□□ -1.1
SCAF4-203ENST00000434667 CHAC1Q9BUX1 264 aa8.2□□□□□ -1.1
SCAF4-203ENST00000434667 TM4SF5O14894 197 aa8.2□□□□□ -1.1
SCAF4-203ENST00000434667 GFRA4Q9GZZ7 299 aa8.2□□□□□ -1.1
SCAF4-203ENST00000434667 TRAV26-1A0A087WT03 109 aa8.19□□□□□ -1.1
SCAF4-203ENST00000434667 IGHV4-39P01824 125 aa8.19□□□□□ -1.1
SCAF4-203ENST00000434667 SRD5A1P18405 259 aa8.19□□□□□ -1.1
SCAF4-203ENST00000434667 GATA4P43694 442 aa8.19□□□□□ -1.1
SCAF4-203ENST00000434667 FAM104BQ5XKR9 115 aa8.19□□□□□ -1.1
SCAF4-203ENST00000434667 NEGR1Q7Z3B1 354 aa8.19□□□□□ -1.1
SCAF4-203ENST00000434667 PPP1R27Q86WC6 154 aa8.19□□□□□ -1.1
SCAF4-203ENST00000434667 SYT8Q8NBV8 401 aa8.19□□□□□ -1.1
SCAF4-203ENST00000434667 SS18L2Q9UHA2 77 aa8.19□□□□□ -1.1
SCAF4-203ENST00000434667 POLQO75417 2590 aa8.19□□□□□ -1.1
SCAF4-203ENST00000434667 TRBV20-1A0A075B6N2 111 aa8.19□□□□□ -1.1
SCAF4-203ENST00000434667 IGKV3D-20A0A0C4DH25 116 aa8.19□□□□□ -1.1
SCAF4-203ENST00000434667 IGHV1-8P0DP01 117 aa8.19□□□□□ -1.1
SCAF4-203ENST00000434667 MAPKAPK5-AS1Q8N8E1 139 aa8.19□□□□□ -1.1
SCAF4-203ENST00000434667 ANAPC13Q9BS18 74 aa8.19□□□□□ -1.1
SCAF4-203ENST00000434667 GEMIN7Q9H840 131 aaKnown RBP8.19□□□□□ -1.1
SCAF4-203ENST00000434667 PGPEP1Q9NXJ5 209 aa8.19□□□□□ -1.1
SCAF4-203ENST00000434667 WI2-2373I1.2A0A1W2PRP0 233 aa8.19□□□□□ -1.1
SCAF4-203ENST00000434667 TMEM8BA6NDV4 472 aa8.19□□□□□ -1.1
SCAF4-203ENST00000434667 C17orf100A8MU93 164 aa8.19□□□□□ -1.1
SCAF4-203ENST00000434667 SMIM17P0DL12 118 aa8.19□□□□□ -1.1
SCAF4-203ENST00000434667 UBTD1Q9HAC8 227 aa8.19□□□□□ -1.1
SCAF4-203ENST00000434667 TTC32Q5I0X7 151 aa8.18□□□□□ -1.1
SCAF4-203ENST00000434667 RNF182Q8N6D2 247 aa8.18□□□□□ -1.1
SCAF4-203ENST00000434667 CSMD2Q7Z408 3487 aa8.18□□□□□ -1.1
SCAF4-203ENST00000434667 SCGB3A1Q96QR1 104 aa8.18□□□□□ -1.1
SCAF4-203ENST00000434667 HRNRQ86YZ3 2850 aaPredicted RBP8.18□□□□□ -1.1
SCAF4-203ENST00000434667 TRAV12-3A0A0B4J271 114 aa8.18□□□□□ -1.1
SCAF4-203ENST00000434667 TMEM178BH3BS89 294 aa8.18□□□□□ -1.1
SCAF4-203ENST00000434667 I3L2K1 104 aa8.18□□□□□ -1.1
SCAF4-203ENST00000434667 IGKCP01834 107 aa8.18□□□□□ -1.1
SCAF4-203ENST00000434667 ZNF491Q8N8L2 437 aa8.18□□□□□ -1.1
SCAF4-203ENST00000434667 LINC00574Q9H8X3 128 aa8.18□□□□□ -1.1
SCAF4-203ENST00000434667 RAXQ9Y2V3 346 aa8.18□□□□□ -1.1
SCAF4-203ENST00000434667 HIVEP3Q5T1R4 2406 aa8.17□□□□□ -1.1
SCAF4-203ENST00000434667 PRAC2D3DTV9 90 aa8.17□□□□□ -1.1
SCAF4-203ENST00000434667 PRRG2O14669 202 aa8.17□□□□□ -1.1
SCAF4-203ENST00000434667 TEX36Q5VZQ5 186 aa8.17□□□□□ -1.1
SCAF4-203ENST00000434667 IGHV1-3A0A0C4DH29 117 aa8.17□□□□□ -1.1
SCAF4-203ENST00000434667 K7EIM0 57 aa8.17□□□□□ -1.1
SCAF4-203ENST00000434667 KLRD1Q13241 179 aa8.17□□□□□ -1.1
SCAF4-203ENST00000434667 DEFB123Q8N688 67 aa8.17□□□□□ -1.1
SCAF4-203ENST00000434667 RNF125Q96EQ8 232 aa8.17□□□□□ -1.1
SCAF4-203ENST00000434667 ZNF256Q9Y2P7 627 aaPredicted RBP8.17□□□□□ -1.1
SCAF4-203ENST00000434667 MUC6Q6W4X9 2439 aa8.17□□□□□ -1.1
SCAF4-203ENST00000434667 FTH1P19P0C7X4 201 aa8.17□□□□□ -1.1
SCAF4-203ENST00000434667 NDPQ00604 133 aa8.17□□□□□ -1.1
SCAF4-203ENST00000434667 OR4X2Q8NGF9 303 aa8.17□□□□□ -1.1
SCAF4-203ENST00000434667 OR5A1Q8NGJ0 315 aa8.17□□□□□ -1.1
SCAF4-203ENST00000434667 ZNF815PA8K554 130 aa8.16□□□□□ -1.1
SCAF4-203ENST00000434667 TRGV3P03979 118 aa8.16□□□□□ -1.1
SCAF4-203ENST00000434667 ATP5IP56385 69 aaPredicted RBP8.16□□□□□ -1.1
SCAF4-203ENST00000434667 MRPL35Q9NZE8 188 aaKnown RBP8.16□□□□□ -1.1
SCAF4-203ENST00000434667 JMJD1CQ15652 2540 aa8.16□□□□□ -1.1
SCAF4-203ENST00000434667 B5MCH6 92 aa8.16□□□□□ -1.1
SCAF4-203ENST00000434667 DLX6P56179 175 aa8.16□□□□□ -1.1
SCAF4-203ENST00000434667 C16orf54Q6UWD8 224 aa8.16□□□□□ -1.1
SCAF4-203ENST00000434667 ZNF562Q6V9R5 426 aa8.16□□□□□ -1.1
SCAF4-203ENST00000434667 TRBV25-1A0A075B6N4 114 aa8.16□□□□□ -1.1
SCAF4-203ENST00000434667 LINC01549A6NIU2 74 aa8.16□□□□□ -1.1
SCAF4-203ENST00000434667 DPM2O94777 84 aa8.16□□□□□ -1.1
SCAF4-203ENST00000434667 LGALS9BQ3B8N2 356 aa8.16□□□□□ -1.1
SCAF4-203ENST00000434667 LGALS9CQ6DKI2 356 aa8.16□□□□□ -1.1
SCAF4-203ENST00000434667 ZNF575Q86XF7 245 aa8.16□□□□□ -1.1
SCAF4-203ENST00000434667 C20orf78Q9BR46 151 aa8.16□□□□□ -1.1
SCAF4-203ENST00000434667 SHANK2-AS3Q9BTD1 123 aa8.16□□□□□ -1.1
SCAF4-203ENST00000434667 MBD3L4A6NDZ8 208 aaPredicted RBP8.15□□□□□ -1.1
SCAF4-203ENST00000434667 MBD3L3A6NE82 208 aaPredicted RBP8.15□□□□□ -1.1
SCAF4-203ENST00000434667 MBD3L5A6NJ08 208 aaPredicted RBP8.15□□□□□ -1.1
SCAF4-203ENST00000434667 TIMM23O14925 209 aa8.15□□□□□ -1.1
SCAF4-203ENST00000434667 HOXA3O43365 443 aaPredicted RBP8.15□□□□□ -1.1
SCAF4-203ENST00000434667 RPS20P60866 119 aaKnown RBP8.15□□□□□ -1.1
SCAF4-203ENST00000434667 TMEM78Q5T7P6 136 aa8.15□□□□□ -1.1
SCAF4-203ENST00000434667 MBD3L2Q8NHZ7 208 aaPredicted RBP8.15□□□□□ -1.1
SCAF4-203ENST00000434667 LINC01548A6NM66 108 aa8.15□□□□□ -1.1
SCAF4-203ENST00000434667 HHLA3Q9XRX5 114 aa8.15□□□□□ -1.1
SCAF4-203ENST00000434667 PHLDA3Q9Y5J5 127 aa8.15□□□□□ -1.1
SCAF4-203ENST00000434667 ZNF292O60281 2723 aa8.15□□□□□ -1.1
SCAF4-203ENST00000434667 DEFB1P60022 68 aa8.15□□□□□ -1.11
SCAF4-203ENST00000434667 RBPJQ06330 500 aa8.15□□□□□ -1.11
SCAF4-203ENST00000434667 GFRALQ6UXV0 394 aa8.15□□□□□ -1.11
SCAF4-203ENST00000434667 HLA-DRB4P13762 266 aa8.14□□□□□ -1.11
SCAF4-203ENST00000434667 PAX8Q06710 450 aa8.14□□□□□ -1.11
SCAF4-203ENST00000434667 ODF1Q14990 250 aa8.14□□□□□ -1.11
SCAF4-203ENST00000434667 C16orf92Q96LL3 132 aa8.14□□□□□ -1.11
SCAF4-203ENST00000434667 HLA-DRB4X5D2U9 266 aa8.14□□□□□ -1.11
SCAF4-203ENST00000434667 TRAV2A0A0B4J234 112 aa8.14□□□□□ -1.11
SCAF4-203ENST00000434667 H3BRN7 92 aa8.14□□□□□ -1.11
SCAF4-203ENST00000434667 HOXB4P17483 251 aaPredicted RBP8.14□□□□□ -1.11
SCAF4-203ENST00000434667 BMI1P35226 326 aa8.14□□□□□ -1.11
SCAF4-203ENST00000434667 TMEM95Q3KNT9 176 aa8.14□□□□□ -1.11
SCAF4-203ENST00000434667 TMEM155Q4W5P6 130 aa8.14□□□□□ -1.11
SCAF4-203ENST00000434667 CRYBG3Q68DQ2 2970 aa8.14□□□□□ -1.11
SCAF4-203ENST00000434667 INS-IGF2F8WCM5 200 aa8.14□□□□□ -1.11
SCAF4-203ENST00000434667 LINC01560Q8TB33 94 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms