RNA–Protein interactions for RNA: ENST00000420482.5

PTPN4-202, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-202ENST00000420482 MRPS16Q9Y3D3 137 aaKnown RBP14.81□□□□□ -0.04
PTPN4-202ENST00000420482 A0A1W2PPQ1 181 aa14.8□□□□□ -0.04
PTPN4-202ENST00000420482 SLAQ13239 276 aa14.8□□□□□ -0.04
PTPN4-202ENST00000420482 SMIM3Q9BZL3 60 aa14.8□□□□□ -0.04
PTPN4-202ENST00000420482 KLF12Q9Y4X4 402 aa14.8□□□□□ -0.04
PTPN4-202ENST00000420482 LENEPQ9Y5L5 61 aa14.8□□□□□ -0.04
PTPN4-202ENST00000420482 TNP2Q05952 138 aa14.79□□□□□ -0.04
PTPN4-202ENST00000420482 ESRGQ1W209 222 aa14.79□□□□□ -0.04
PTPN4-202ENST00000420482 ABCA13Q86UQ4 5058 aa14.79□□□□□ -0.04
PTPN4-202ENST00000420482 ST6GAL2Q96JF0 529 aa14.79□□□□□ -0.04
PTPN4-202ENST00000420482 A0A1W2PPV4 95 aa14.78□□□□□ -0.04
PTPN4-202ENST00000420482 BTF3P20290 206 aaKnown RBP14.78□□□□□ -0.04
PTPN4-202ENST00000420482 ACOT6Q3I5F7 207 aaPredicted RBP14.78□□□□□ -0.04
PTPN4-202ENST00000420482 Q8TAT8 98 aa14.78□□□□□ -0.04
PTPN4-202ENST00000420482 CMTM2Q8TAZ6 248 aa14.78□□□□□ -0.04
PTPN4-202ENST00000420482 MBD2Q9UBB5 411 aa14.78□□□□□ -0.04
PTPN4-202ENST00000420482 ZNF266Q14584 549 aa14.77□□□□□ -0.05
PTPN4-202ENST00000420482 PRR9Q5T870 116 aa14.77□□□□□ -0.05
PTPN4-202ENST00000420482 VSIG2Q96IQ7 327 aa14.77□□□□□ -0.05
PTPN4-202ENST00000420482 ICOSQ9Y6W8 199 aa14.77□□□□□ -0.05
PTPN4-202ENST00000420482 A0A096LPF7 62 aa14.76□□□□□ -0.05
PTPN4-202ENST00000420482 C16orf90A8MZG2 172 aa14.76□□□□□ -0.05
PTPN4-202ENST00000420482 PAX4O43316 350 aa14.76□□□□□ -0.05
PTPN4-202ENST00000420482 FAM159AQ6UWV7 190 aa14.76□□□□□ -0.05
PTPN4-202ENST00000420482 PQLC2Q6ZP29 291 aa14.76□□□□□ -0.05
PTPN4-202ENST00000420482 ZNF575Q86XF7 245 aa14.76□□□□□ -0.05
PTPN4-202ENST00000420482 TMED6Q8WW62 240 aa14.76□□□□□ -0.05
PTPN4-202ENST00000420482 OTORQ9NRC9 128 aa14.76□□□□□ -0.05
PTPN4-202ENST00000420482 PRO0255Q9UI72 69 aa14.76□□□□□ -0.05
PTPN4-202ENST00000420482 TP53TG3Q9ULZ0 132 aa14.76□□□□□ -0.05
PTPN4-202ENST00000420482 DIRC3C9JPN6 131 aa14.75□□□□□ -0.05
PTPN4-202ENST00000420482 HYLS1Q96M11 299 aa14.75□□□□□ -0.05
PTPN4-202ENST00000420482 BATF3Q9NR55 127 aa14.75□□□□□ -0.05
PTPN4-202ENST00000420482 MRPL16Q9NX20 251 aaKnown RBP14.75□□□□□ -0.05
PTPN4-202ENST00000420482 TRGV11A0A075B6L2 103 aa14.74□□□□□ -0.05
PTPN4-202ENST00000420482 ARL6IP6Q8N6S5 226 aa14.74□□□□□ -0.05
PTPN4-202ENST00000420482 SPXQ9BT56 116 aa14.74□□□□□ -0.05
PTPN4-202ENST00000420482 HHLA3Q9XRX5 114 aa14.74□□□□□ -0.05
PTPN4-202ENST00000420482 PGPA6NDG6 321 aa14.73□□□□□ -0.05
PTPN4-202ENST00000420482 IGHV3-53P01767 116 aa14.73□□□□□ -0.05
PTPN4-202ENST00000420482 MUC21Q5SSG8 566 aa14.73□□□□□ -0.05
PTPN4-202ENST00000420482 Q6AWC8 147 aa14.73□□□□□ -0.05
PTPN4-202ENST00000420482 SIVA1O15304 175 aa14.72□□□□□ -0.05
PTPN4-202ENST00000420482 MRPL23Q16540 153 aaKnown RBP14.72□□□□□ -0.05
PTPN4-202ENST00000420482 RPH3ALQ9UNE2 315 aa14.72□□□□□ -0.05
PTPN4-202ENST00000420482 TRGV4A0A0C4DH28 118 aa14.71□□□□□ -0.05
PTPN4-202ENST00000420482 Q6ZQT7 251 aa14.71□□□□□ -0.05
PTPN4-202ENST00000420482 OR10G4Q8NGN3 311 aa14.71□□□□□ -0.05
PTPN4-202ENST00000420482 OR10G9Q8NGN4 311 aa14.71□□□□□ -0.05
PTPN4-202ENST00000420482 OR10G7Q8NGN6 311 aa14.71□□□□□ -0.05
PTPN4-202ENST00000420482 CRYBA4P53673 196 aa14.7□□□□□ -0.06
PTPN4-202ENST00000420482 TMEM183BQ1AE95 376 aa14.7□□□□□ -0.06
PTPN4-202ENST00000420482 TMEM183AQ8IXX5 376 aa14.7□□□□□ -0.06
PTPN4-202ENST00000420482 PCNPQ8WW12 178 aaKnown RBP14.7□□□□□ -0.06
PTPN4-202ENST00000420482 HSPG2P98160 4391 aa14.69□□□□□ -0.06
PTPN4-202ENST00000420482 C8orf49Q96NF6 230 aa14.69□□□□□ -0.06
PTPN4-202ENST00000420482 KRTAP1-5Q9BYS1 174 aa14.69□□□□□ -0.06
PTPN4-202ENST00000420482 NAGKQ9UJ70 344 aa14.69□□□□□ -0.06
PTPN4-202ENST00000420482 TRAV21A0A0B4J279 112 aa14.68□□□□□ -0.06
PTPN4-202ENST00000420482 SERTM2A0A1B0GWG4 89 aa14.68□□□□□ -0.06
PTPN4-202ENST00000420482 RAB2AP61019 212 aa14.68□□□□□ -0.06
PTPN4-202ENST00000420482 FHL2Q14192 279 aa14.68□□□□□ -0.06
PTPN4-202ENST00000420482 TDRG1Q3Y452 100 aa14.68□□□□□ -0.06
PTPN4-202ENST00000420482 GOLT1AQ6ZVE7 132 aa14.68□□□□□ -0.06
PTPN4-202ENST00000420482 NEGR1Q7Z3B1 354 aa14.68□□□□□ -0.06
PTPN4-202ENST00000420482 RASL10AQ92737 203 aa14.68□□□□□ -0.06
PTPN4-202ENST00000420482 NDFIP1Q9BT67 221 aa14.68□□□□□ -0.06
PTPN4-202ENST00000420482 WFDC1Q9HC57 220 aa14.68□□□□□ -0.06
PTPN4-202ENST00000420482 MDFICQ9P1T7 246 aa14.68□□□□□ -0.06
PTPN4-202ENST00000420482 ALG5Q9Y673 324 aa14.68□□□□□ -0.06
PTPN4-202ENST00000420482 K7EQM0 130 aa14.67□□□□□ -0.06
PTPN4-202ENST00000420482 CDK2AP2O75956 126 aa14.67□□□□□ -0.06
PTPN4-202ENST00000420482 NXPH4O95158 308 aa14.67□□□□□ -0.06
PTPN4-202ENST00000420482 MBP02144 154 aa14.67□□□□□ -0.06
PTPN4-202ENST00000420482 ORM1P02763 201 aa14.67□□□□□ -0.06
PTPN4-202ENST00000420482 CDC34P49427 236 aaPredicted RBP14.67□□□□□ -0.06
PTPN4-202ENST00000420482 IQCF2Q8IXL9 164 aa14.67□□□□□ -0.06
PTPN4-202ENST00000420482 KCNS1Q96KK3 526 aa14.67□□□□□ -0.06
PTPN4-202ENST00000420482 KRTAP4-5Q9BYR2 181 aa14.67□□□□□ -0.06
PTPN4-202ENST00000420482 MED28Q9H204 178 aa14.67□□□□□ -0.06
PTPN4-202ENST00000420482 TREM1Q9NP99 234 aa14.67□□□□□ -0.06
PTPN4-202ENST00000420482 TRAV9-2A0A087WT02 112 aa14.66□□□□□ -0.06
PTPN4-202ENST00000420482 PTTG1O95997 202 aa14.66□□□□□ -0.06
PTPN4-202ENST00000420482 SRIP30626 198 aa14.66□□□□□ -0.06
PTPN4-202ENST00000420482 SPATA12Q7Z6I5 190 aa14.66□□□□□ -0.06
PTPN4-202ENST00000420482 EIF3GO75821 320 aaKnown RBP eCLIP14.65□□□□□ -0.06
PTPN4-202ENST00000420482 OR2G3Q8NGZ4 309 aa14.65□□□□□ -0.06
PTPN4-202ENST00000420482 PSMG3Q9BT73 122 aaPredicted RBP14.65□□□□□ -0.06
PTPN4-202ENST00000420482 SDF2L1Q9HCN8 221 aa14.65□□□□□ -0.06
PTPN4-202ENST00000420482 C9JCJ5 164 aa14.64□□□□□ -0.07
PTPN4-202ENST00000420482 M0R2P5 195 aa14.64□□□□□ -0.07
PTPN4-202ENST00000420482 HMGB3O15347 200 aaKnown RBP14.64□□□□□ -0.07
PTPN4-202ENST00000420482 ARL14EPLP0DKL9 152 aa14.64□□□□□ -0.07
PTPN4-202ENST00000420482 LINC00315P59091 139 aa14.64□□□□□ -0.07
PTPN4-202ENST00000420482 SERF2P84101 59 aa14.64□□□□□ -0.07
PTPN4-202ENST00000420482 LYPD5Q6UWN5 251 aa14.64□□□□□ -0.07
PTPN4-202ENST00000420482 HSD17B11Q8NBQ5 300 aa14.64□□□□□ -0.07
PTPN4-202ENST00000420482 ASB13Q8WXK3 278 aa14.64□□□□□ -0.07
PTPN4-202ENST00000420482 TXNDC17Q9BRA2 123 aa14.64□□□□□ -0.07
PTPN4-202ENST00000420482 TRAV4A0A0B4J268 109 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms