RNA–Protein interactions for RNA: ENST00000414786.6

SHANK3-202, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

TSL 5

Gene SHANK3, Length 7,394 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-202ENST00000414786 IGKV4-1P06312 121 aa14.73□□□□□ -0.05
SHANK3-202ENST00000414786 CRYGSP22914 178 aa14.72□□□□□ -0.05
SHANK3-202ENST00000414786 DEFB135Q30KP9 77 aa14.72□□□□□ -0.05
SHANK3-202ENST00000414786 IGHG2P01859 326 aa14.71□□□□□ -0.05
SHANK3-202ENST00000414786 GATA3P23771 443 aa14.71□□□□□ -0.05
SHANK3-202ENST00000414786 LINC00114Q6XXX2 140 aa14.71□□□□□ -0.05
SHANK3-202ENST00000414786 A0A0G2JRQ6 117 aa14.71□□□□□ -0.05
SHANK3-202ENST00000414786 IGLV3-12A0A075B6K2 115 aa14.71□□□□□ -0.05
SHANK3-202ENST00000414786 NDUFB1O75438 58 aa14.71□□□□□ -0.06
SHANK3-202ENST00000414786 FOXE3Q13461 319 aa14.71□□□□□ -0.06
SHANK3-202ENST00000414786 MRPL51Q4U2R6 128 aaKnown RBP14.71□□□□□ -0.06
SHANK3-202ENST00000414786 C9orf66Q5T8R8 295 aa14.71□□□□□ -0.06
SHANK3-202ENST00000414786 Q6P435 159 aa14.71□□□□□ -0.06
SHANK3-202ENST00000414786 GAGE12HA6NDE8 117 aa14.7□□□□□ -0.06
SHANK3-202ENST00000414786 LY6G6FQ5SQ64 297 aa14.7□□□□□ -0.06
SHANK3-202ENST00000414786 ICOSQ9Y6W8 199 aa14.7□□□□□ -0.06
SHANK3-202ENST00000414786 FAM231BA6NCW3 169 aa14.7□□□□□ -0.06
SHANK3-202ENST00000414786 C15orf62A8K5M9 175 aa14.7□□□□□ -0.06
SHANK3-202ENST00000414786 PCNX1Q96RV3 2341 aa14.7□□□□□ -0.06
SHANK3-202ENST00000414786 HOXB4P17483 251 aaPredicted RBP14.7□□□□□ -0.06
SHANK3-202ENST00000414786 NYNRINQ9P2P1 1898 aaKnown RBP14.69□□□□□ -0.06
SHANK3-202ENST00000414786 Q9H8V8 135 aa14.69□□□□□ -0.06
SHANK3-202ENST00000414786 SPTAN1Q13813 2472 aaKnown RBP14.69□□□□□ -0.06
SHANK3-202ENST00000414786 LYPD6BQ8NI32 183 aa14.69□□□□□ -0.06
SHANK3-202ENST00000414786 TRPM3Q9HCF6 1732 aaPredicted RBP14.69□□□□□ -0.06
SHANK3-202ENST00000414786 A0A1B0GW64 132 aa14.69□□□□□ -0.06
SHANK3-202ENST00000414786 ELANEP08246 267 aa14.69□□□□□ -0.06
SHANK3-202ENST00000414786 CYYR1Q96J86 154 aa14.69□□□□□ -0.06
SHANK3-202ENST00000414786 ZNF134P52741 427 aa14.69□□□□□ -0.06
SHANK3-202ENST00000414786 TMEM141Q96I45 108 aa14.69□□□□□ -0.06
SHANK3-202ENST00000414786 IGKV3D-7A0A0C4DH55 119 aa14.68□□□□□ -0.06
SHANK3-202ENST00000414786 RHOHQ15669 191 aa14.68□□□□□ -0.06
SHANK3-202ENST00000414786 DAND5Q8N907 189 aa14.68□□□□□ -0.06
SHANK3-202ENST00000414786 KLF2Q9Y5W3 355 aaPredicted RBP14.68□□□□□ -0.06
SHANK3-202ENST00000414786 BTCP35070 178 aa14.68□□□□□ -0.06
SHANK3-202ENST00000414786 Q6ZS92 163 aa14.68□□□□□ -0.06
SHANK3-202ENST00000414786 RNF5Q99942 180 aa14.68□□□□□ -0.06
SHANK3-202ENST00000414786 C17orf77Q96MU5 243 aa14.68□□□□□ -0.06
SHANK3-202ENST00000414786 TMEM14BQ9NUH8 114 aa14.68□□□□□ -0.06
SHANK3-202ENST00000414786 TRAV13-2A0A0B4J235 113 aa14.68□□□□□ -0.06
SHANK3-202ENST00000414786 A0A0J9YWU9 116 aa14.67□□□□□ -0.06
SHANK3-202ENST00000414786 TEX22C9J3V5 150 aa14.67□□□□□ -0.06
SHANK3-202ENST00000414786 KLK5Q9Y337 293 aaPredicted RBP14.67□□□□□ -0.06
SHANK3-202ENST00000414786 HIST2H2BCQ6DN03 193 aa14.67□□□□□ -0.06
SHANK3-202ENST00000414786 GFI1Q99684 422 aa14.67□□□□□ -0.06
SHANK3-202ENST00000414786 SCN4AP35499 1836 aa14.67□□□□□ -0.06
SHANK3-202ENST00000414786 IGLV3-19P01714 112 aa14.67□□□□□ -0.06
SHANK3-202ENST00000414786 M0R2N4 97 aa14.67□□□□□ -0.06
SHANK3-202ENST00000414786 FUSP35637 526 aaKnown RBP eCLIP14.67□□□□□ -0.062e-6■■■□□ 15.1
SHANK3-202ENST00000414786 RETNQ9HD89 108 aa14.67□□□□□ -0.06
SHANK3-202ENST00000414786 IGKV1-6A0A0C4DH72 117 aa14.66□□□□□ -0.06
SHANK3-202ENST00000414786 IGHV4-38-2P0DP08 117 aa14.66□□□□□ -0.06
SHANK3-202ENST00000414786 HIST2H2BDQ6DRA6 164 aa14.66□□□□□ -0.06
SHANK3-202ENST00000414786 MRPL53Q96EL3 112 aaKnown RBP14.66□□□□□ -0.06
SHANK3-202ENST00000414786 NDUFS6O75380 124 aaKnown RBP14.66□□□□□ -0.06
SHANK3-202ENST00000414786 HERVK_113P63121 156 aa14.66□□□□□ -0.06
SHANK3-202ENST00000414786 XIRP1Q702N8 1843 aaKnown RBP14.66□□□□□ -0.06
SHANK3-202ENST00000414786 DLEU1O43261 78 aa14.66□□□□□ -0.06
SHANK3-202ENST00000414786 CASC2Q6XLA1 102 aa14.66□□□□□ -0.06
SHANK3-202ENST00000414786 FGF16O43320 207 aa14.65□□□□□ -0.06
SHANK3-202ENST00000414786 TNCP24821 2201 aa14.65□□□□□ -0.06
SHANK3-202ENST00000414786 IGHV7-4-1A0A0J9YVY3 117 aa14.65□□□□□ -0.06
SHANK3-202ENST00000414786 SPART-AS1P0CW21 52 aa14.65□□□□□ -0.06
SHANK3-202ENST00000414786 ADAMTS7Q9UKP4 1686 aa14.64□□□□□ -0.07
SHANK3-202ENST00000414786 BAALC-AS2P0C853 105 aa14.64□□□□□ -0.07
SHANK3-202ENST00000414786 FLVCR1-AS1Q8TAF5 88 aa14.64□□□□□ -0.07
SHANK3-202ENST00000414786 ARHGAP21Q5T5U3 1957 aa14.64□□□□□ -0.07
SHANK3-202ENST00000414786 DEFB113Q30KQ7 82 aa14.64□□□□□ -0.07
SHANK3-202ENST00000414786 NDUFA4O00483 81 aa14.64□□□□□ -0.07
SHANK3-202ENST00000414786 ORMDL1Q9P0S3 153 aa14.64□□□□□ -0.07
SHANK3-202ENST00000414786 IFITM1P13164 125 aa14.63□□□□□ -0.07
SHANK3-202ENST00000414786 HRCT1Q6UXD1 115 aa14.63□□□□□ -0.07
SHANK3-202ENST00000414786 MRPL35Q9NZE8 188 aaKnown RBP14.63□□□□□ -0.07
SHANK3-202ENST00000414786 Q8N8P6 123 aa14.63□□□□□ -0.07
SHANK3-202ENST00000414786 COL4A5P29400 1685 aa14.63□□□□□ -0.07
SHANK3-202ENST00000414786 EML6Q6ZMW3 1958 aa14.63□□□□□ -0.07
SHANK3-202ENST00000414786 LYPD1Q8N2G4 141 aa14.63□□□□□ -0.07
SHANK3-202ENST00000414786 FBLN5Q9UBX5 448 aa14.63□□□□□ -0.07
SHANK3-202ENST00000414786 UBE2V1Q13404 147 aa14.62□□□□□ -0.07
SHANK3-202ENST00000414786 HIGD2BQ4VC39 106 aa14.62□□□□□ -0.07
SHANK3-202ENST00000414786 ETV2O00321 342 aaPredicted RBP14.62□□□□□ -0.07
SHANK3-202ENST00000414786 IFI6P09912 130 aa14.62□□□□□ -0.07
SHANK3-202ENST00000414786 C1orf194Q5T5A4 169 aa14.62□□□□□ -0.07
SHANK3-202ENST00000414786 RBBP6Q7Z6E9 1792 aaKnown RBP14.62□□□□□ -0.07
SHANK3-202ENST00000414786 PARP14Q460N5 1801 aa14.62□□□□□ -0.07
SHANK3-202ENST00000414786 IGHV4-30-2A0A087WSY4 118 aa14.62□□□□□ -0.07
SHANK3-202ENST00000414786 ANKRD29Q8N6D5 301 aa14.62□□□□□ -0.07
SHANK3-202ENST00000414786 VSIG2Q96IQ7 327 aa14.62□□□□□ -0.07
SHANK3-202ENST00000414786 TRBV20-1A0A075B6N2 111 aa14.62□□□□□ -0.07
SHANK3-202ENST00000414786 IGLV3-9A0A075B6K5 115 aa14.62□□□□□ -0.07
SHANK3-202ENST00000414786 Q6ZRM9 215 aa14.62□□□□□ -0.07
SHANK3-202ENST00000414786 ACACAQ13085 2346 aa14.62□□□□□ -0.07
SHANK3-202ENST00000414786 ARID2Q68CP9 1835 aa14.61□□□□□ -0.07
SHANK3-202ENST00000414786 DYNAPQ8N1N2 210 aa14.61□□□□□ -0.07
SHANK3-202ENST00000414786 KLK12Q9UKR0 248 aa14.61□□□□□ -0.07
SHANK3-202ENST00000414786 IGLV2-33A0A075B6J2 118 aaPredicted RBP14.61□□□□□ -0.07
SHANK3-202ENST00000414786 MRPL27Q9P0M9 148 aaKnown RBP14.61□□□□□ -0.07
SHANK3-202ENST00000414786 H3BMG7 143 aa14.61□□□□□ -0.07
SHANK3-202ENST00000414786 PRSS33Q8NF86 280 aa14.61□□□□□ -0.07
SHANK3-202ENST00000414786 ATP6V0E2Q8NHE4 81 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 150 ms