RNA–Protein interactions for RNA: ENST00000409952.3

LSM5-205, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-205ENST00000409952 Q1T7F1 81 aa2.52□□□□□ -2.01
LSM5-205ENST00000409952 CLLU1Q5K131 121 aa2.52□□□□□ -2.01
LSM5-205ENST00000409952 HCP5Q6MZN7 132 aa2.52□□□□□ -2.01
LSM5-205ENST00000409952 ATOH7Q8N100 152 aa2.52□□□□□ -2.01
LSM5-205ENST00000409952 OR5AS1Q8N127 324 aa2.52□□□□□ -2.01
LSM5-205ENST00000409952 C12orf57Q99622 126 aa2.52□□□□□ -2.01
LSM5-205ENST00000409952 SOX21Q9Y651 276 aaPredicted RBP2.52□□□□□ -2.01
LSM5-205ENST00000409952 ADAMTS7Q9UKP4 1686 aa2.52□□□□□ -2.01
LSM5-205ENST00000409952 ARHGAP32A7KAX9 2087 aa2.52□□□□□ -2.01
LSM5-205ENST00000409952 CACNA1BQ00975 2339 aa2.52□□□□□ -2.01
LSM5-205ENST00000409952 ARHGAP31Q2M1Z3 1444 aa2.51□□□□□ -2.01
LSM5-205ENST00000409952 RICTORQ6R327 1708 aa2.51□□□□□ -2.01
LSM5-205ENST00000409952 COL1A2P08123 1366 aa2.51□□□□□ -2.01
LSM5-205ENST00000409952 IQGAP1P46940 1657 aa2.51□□□□□ -2.01
LSM5-205ENST00000409952 TRAV10A0A0B4J240 114 aa2.51□□□□□ -2.01
LSM5-205ENST00000409952 TRGV4A0A0C4DH28 118 aa2.51□□□□□ -2.01
LSM5-205ENST00000409952 A0A0G2JMM0 328 aa2.51□□□□□ -2.01
LSM5-205ENST00000409952 SPRR5A0A1B0GTR4 108 aa2.51□□□□□ -2.01
LSM5-205ENST00000409952 A0A1W2PPB8 328 aa2.51□□□□□ -2.01
LSM5-205ENST00000409952 C2orf70A6NJV1 201 aa2.51□□□□□ -2.01
LSM5-205ENST00000409952 KIR3DP1A8MWS1 328 aa2.51□□□□□ -2.01
LSM5-205ENST00000409952 YPEL1O60688 119 aa2.51□□□□□ -2.01
LSM5-205ENST00000409952 RBP4P02753 201 aa2.51□□□□□ -2.01
LSM5-205ENST00000409952 APODP05090 189 aa2.51□□□□□ -2.01
LSM5-205ENST00000409952 PDE6HQ13956 83 aa2.51□□□□□ -2.01
LSM5-205ENST00000409952 OCIAD2Q56VL3 154 aa2.51□□□□□ -2.01
LSM5-205ENST00000409952 KRTAP5-5Q701N2 237 aaPredicted RBP2.51□□□□□ -2.01
LSM5-205ENST00000409952 LYPD1Q8N2G4 141 aa2.51□□□□□ -2.01
LSM5-205ENST00000409952 OTOSQ8NHW6 89 aa2.51□□□□□ -2.01
LSM5-205ENST00000409952 SPACA4Q8TDM5 124 aa2.51□□□□□ -2.01
LSM5-205ENST00000409952 Q96M85 177 aa2.51□□□□□ -2.01
LSM5-205ENST00000409952 TCEAL7Q9BRU2 100 aa2.51□□□□□ -2.01
LSM5-205ENST00000409952 CST11Q9H112 138 aa2.51□□□□□ -2.01
LSM5-205ENST00000409952 SAR1AQ9NR31 198 aa2.51□□□□□ -2.01
LSM5-205ENST00000409952 LSM2Q9Y333 95 aaKnown RBP2.51□□□□□ -2.01
LSM5-205ENST00000409952 KDM5DQ9BY66 1539 aa2.51□□□□□ -2.01
LSM5-205ENST00000409952 ZNF518AQ6AHZ1 1483 aa2.51□□□□□ -2.01
LSM5-205ENST00000409952 MAST4O15021 2626 aa2.51□□□□□ -2.01
LSM5-205ENST00000409952 SCN8AQ9UQD0 1980 aa2.5□□□□□ -2.01
LSM5-205ENST00000409952 DIP2AQ14689 1571 aa2.5□□□□□ -2.01
LSM5-205ENST00000409952 C5orf67F2Z3F1 127 aa2.5□□□□□ -2.01
LSM5-205ENST00000409952 F6UZH7 168 aa2.5□□□□□ -2.01
LSM5-205ENST00000409952 H3BRN7 92 aa2.5□□□□□ -2.01
LSM5-205ENST00000409952 ERC2-IT1O76042 136 aa2.5□□□□□ -2.01
LSM5-205ENST00000409952 IGKV1-17P01599 117 aa2.5□□□□□ -2.01
LSM5-205ENST00000409952 PYYP10082 97 aa2.5□□□□□ -2.01
LSM5-205ENST00000409952 MRPS10P82664 201 aaKnown RBP2.5□□□□□ -2.01
LSM5-205ENST00000409952 C2orf82Q6UX34 121 aa2.5□□□□□ -2.01
LSM5-205ENST00000409952 LINC00269Q8N2A0 174 aa2.5□□□□□ -2.01
LSM5-205ENST00000409952 Q8N2B8 174 aa2.5□□□□□ -2.01
LSM5-205ENST00000409952 TCTEX1D1Q8N7M0 179 aa2.5□□□□□ -2.01
LSM5-205ENST00000409952 STRCP1A6NGW2 1772 aa2.5□□□□□ -2.01
LSM5-205ENST00000409952 UHRF1BP1LA0JNW5 1464 aa2.5□□□□□ -2.01
LSM5-205ENST00000409952 CFAP74Q9C0B2 1584 aa2.49□□□□□ -2.01
LSM5-205ENST00000409952 ZMYM4Q5VZL5 1548 aa2.49□□□□□ -2.01
LSM5-205ENST00000409952 IGKV1D-17A0A075B6S4 117 aa2.49□□□□□ -2.01
LSM5-205ENST00000409952 BBIP1A8MTZ0 92 aa2.49□□□□□ -2.01
LSM5-205ENST00000409952 PRB2P02812 416 aaPredicted RBP2.49□□□□□ -2.01
LSM5-205ENST00000409952 SCIMPQ6UWF3 145 aa2.49□□□□□ -2.01
LSM5-205ENST00000409952 CLECL1Q8IZS7 167 aa2.49□□□□□ -2.01
LSM5-205ENST00000409952 ZNF436-AS1Q8NC38 126 aaPredicted RBP2.49□□□□□ -2.01
LSM5-205ENST00000409952 MPC1Q9Y5U8 109 aa2.49□□□□□ -2.01
LSM5-205ENST00000409952 CHCHD2Q9Y6H1 151 aaPredicted RBP2.49□□□□□ -2.01
LSM5-205ENST00000409952 MROH2AA6NES4 1674 aa2.49□□□□□ -2.01
LSM5-205ENST00000409952 CNTLNQ9NXG0 1405 aa2.49□□□□□ -2.01
LSM5-205ENST00000409952 GLI3P10071 1580 aa2.49□□□□□ -2.01
LSM5-205ENST00000409952 KMT2BQ9UMN6 2715 aaPredicted RBP2.48□□□□□ -2.01
LSM5-205ENST00000409952 ZNF462Q96JM2 2506 aa2.48□□□□□ -2.01
LSM5-205ENST00000409952 PXDNLA1KZ92 1463 aa2.48□□□□□ -2.01
LSM5-205ENST00000409952 MAGI2Q86UL8 1455 aa2.48□□□□□ -2.01
LSM5-205ENST00000409952 C3orf85A0A1B0GTC6 90 aa2.48□□□□□ -2.01
LSM5-205ENST00000409952 A6NN06 94 aa2.48□□□□□ -2.01
LSM5-205ENST00000409952 M0R129 80 aa2.48□□□□□ -2.01
LSM5-205ENST00000409952 FGF7P21781 194 aa2.48□□□□□ -2.01
LSM5-205ENST00000409952 IDO2Q6ZQW0 420 aa2.48□□□□□ -2.01
LSM5-205ENST00000409952 FAM19A2Q8N3H0 131 aa2.48□□□□□ -2.01
LSM5-205ENST00000409952 TTTY12Q9BZ98 90 aa2.48□□□□□ -2.01
LSM5-205ENST00000409952 ABCA5Q8WWZ7 1642 aa2.48□□□□□ -2.01
LSM5-205ENST00000409952 ADGRB3O60242 1522 aa2.47□□□□□ -2.01
LSM5-205ENST00000409952 TET3O43151 1660 aa2.47□□□□□ -2.01
LSM5-205ENST00000409952 ITSN2Q9NZM3 1697 aa2.47□□□□□ -2.01
LSM5-205ENST00000409952 ZSWIM8A7E2V4 1837 aa2.47□□□□□ -2.01
LSM5-205ENST00000409952 BDP1A6H8Y1 2624 aa2.47□□□□□ -2.01
LSM5-205ENST00000409952 TRAV14DV4A0A0A6YYC5 116 aa2.47□□□□□ -2.01
LSM5-205ENST00000409952 IGHV1-24A0A0C4DH33 117 aa2.47□□□□□ -2.01
LSM5-205ENST00000409952 LOC100130705A0A1B0GUX0 176 aa2.47□□□□□ -2.01
LSM5-205ENST00000409952 C9orf170A2RU37 121 aa2.47□□□□□ -2.01
LSM5-205ENST00000409952 M0R2P5 195 aa2.47□□□□□ -2.01
LSM5-205ENST00000409952 CORTO00230 105 aa2.47□□□□□ -2.01
LSM5-205ENST00000409952 CXCL8P10145 99 aa2.47□□□□□ -2.01
LSM5-205ENST00000409952 BRS3P32247 399 aa2.47□□□□□ -2.01
LSM5-205ENST00000409952 CCSMST1Q4G0I0 132 aa2.47□□□□□ -2.01
LSM5-205ENST00000409952 DPH3Q96FX2 82 aa2.47□□□□□ -2.01
LSM5-205ENST00000409952 CIB3Q96Q77 187 aaPredicted RBP2.47□□□□□ -2.01
LSM5-205ENST00000409952 PDCD10Q9BUL8 212 aa2.47□□□□□ -2.01
LSM5-205ENST00000409952 NAIPQ13075 1403 aa2.47□□□□□ -2.01
LSM5-205ENST00000409952 NUP188Q5SRE5 1749 aa2.47□□□□□ -2.01
LSM5-205ENST00000409952 FAM135AQ9P2D6 1515 aa2.47□□□□□ -2.01
LSM5-205ENST00000409952 DEPDC5O75140 1603 aa2.46□□□□□ -2.02
LSM5-205ENST00000409952 CICQ96RK0 1608 aaPredicted RBP2.46□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms