RNA–Protein interactions for RNA: ENST00000409747.5

CBX3-203, Transcript of chromobox 3, humanhuman

TSL 1 (best) BASIC

Gene CBX3, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-203ENST00000409747 DEFA3P59666 94 aa10.19□□□□□ -0.78
CBX3-203ENST00000409747 PRR9Q5T870 116 aa10.19□□□□□ -0.78
CBX3-203ENST00000409747 SCGB1C1Q8TD33 95 aa10.19□□□□□ -0.78
CBX3-203ENST00000409747 MARVELD1Q9BSK0 173 aa10.19□□□□□ -0.78
CBX3-203ENST00000409747 PTTG2Q9NZH5 202 aa10.19□□□□□ -0.78
CBX3-203ENST00000409747 HSPB11Q9Y547 144 aa10.19□□□□□ -0.78
CBX3-203ENST00000409747 RANP62826 216 aaKnown RBP10.18□□□□□ -0.78
CBX3-203ENST00000409747 FFAR4Q5NUL3 377 aa10.18□□□□□ -0.78
CBX3-203ENST00000409747 Q8TAT8 98 aa10.18□□□□□ -0.78
CBX3-203ENST00000409747 KRTAP1-5Q9BYS1 174 aa10.18□□□□□ -0.78
CBX3-203ENST00000409747 ICOSQ9Y6W8 199 aa10.18□□□□□ -0.78
CBX3-203ENST00000409747 PAX4O43316 350 aa10.17□□□□□ -0.78
CBX3-203ENST00000409747 MPC2O95563 127 aa10.17□□□□□ -0.78
CBX3-203ENST00000409747 IFITM3Q01628 133 aa10.17□□□□□ -0.78
CBX3-203ENST00000409747 ZNF266Q14584 549 aa10.17□□□□□ -0.78
CBX3-203ENST00000409747 MRPL16Q9NX20 251 aaKnown RBP10.17□□□□□ -0.78
CBX3-203ENST00000409747 PRO0255Q9UI72 69 aa10.17□□□□□ -0.78
CBX3-203ENST00000409747 TP53TG3Q9ULZ0 132 aa10.17□□□□□ -0.78
CBX3-203ENST00000409747 LENEPQ9Y5L5 61 aa10.17□□□□□ -0.78
CBX3-203ENST00000409747 IGHV3-53P01767 116 aa10.16□□□□□ -0.78
CBX3-203ENST00000409747 RPL12P30050 165 aaKnown RBP10.16□□□□□ -0.78
CBX3-203ENST00000409747 FAM74A1Q5RGS3 127 aa10.16□□□□□ -0.78
CBX3-203ENST00000409747 ABCA13Q86UQ4 5058 aa10.15□□□□□ -0.78
CBX3-203ENST00000409747 LRP1BQ9NZR2 4599 aa10.15□□□□□ -0.78
CBX3-203ENST00000409747 SIVA1O15304 175 aa10.15□□□□□ -0.78
CBX3-203ENST00000409747 SPATA12Q7Z6I5 190 aa10.15□□□□□ -0.78
CBX3-203ENST00000409747 TMED6Q8WW62 240 aa10.15□□□□□ -0.78
CBX3-203ENST00000409747 HHLA3Q9XRX5 114 aa10.15□□□□□ -0.78
CBX3-203ENST00000409747 HSPG2P98160 4391 aa10.15□□□□□ -0.79
CBX3-203ENST00000409747 TRGV11A0A075B6L2 103 aa10.14□□□□□ -0.79
CBX3-203ENST00000409747 DIRC3C9JPN6 131 aa10.14□□□□□ -0.79
CBX3-203ENST00000409747 Q6AWC8 147 aa10.14□□□□□ -0.79
CBX3-203ENST00000409747 FAM159AQ6UWV7 190 aa10.14□□□□□ -0.79
CBX3-203ENST00000409747 Q6ZQT7 251 aa10.14□□□□□ -0.79
CBX3-203ENST00000409747 CMTM2Q8TAZ6 248 aa10.14□□□□□ -0.79
CBX3-203ENST00000409747 SMIM3Q9BZL3 60 aa10.14□□□□□ -0.79
CBX3-203ENST00000409747 A6NHS1 94 aa10.13□□□□□ -0.79
CBX3-203ENST00000409747 CRYBA4P53673 196 aa10.13□□□□□ -0.79
CBX3-203ENST00000409747 MRPL23Q16540 153 aaKnown RBP10.13□□□□□ -0.79
CBX3-203ENST00000409747 ACOT6Q3I5F7 207 aaPredicted RBP10.13□□□□□ -0.79
CBX3-203ENST00000409747 MUC21Q5SSG8 566 aa10.13□□□□□ -0.79
CBX3-203ENST00000409747 PQLC2Q6ZP29 291 aa10.13□□□□□ -0.79
CBX3-203ENST00000409747 SPXQ9BT56 116 aa10.13□□□□□ -0.79
CBX3-203ENST00000409747 OTORQ9NRC9 128 aa10.13□□□□□ -0.79
CBX3-203ENST00000409747 MBD2Q9UBB5 411 aa10.13□□□□□ -0.79
CBX3-203ENST00000409747 TRGV4A0A0C4DH28 118 aa10.13□□□□□ -0.79
CBX3-203ENST00000409747 NXPH4O95158 308 aa10.13□□□□□ -0.79
CBX3-203ENST00000409747 LINC00315P59091 139 aa10.13□□□□□ -0.79
CBX3-203ENST00000409747 ARL6IP6Q8N6S5 226 aa10.13□□□□□ -0.79
CBX3-203ENST00000409747 HYLS1Q96M11 299 aa10.13□□□□□ -0.79
CBX3-203ENST00000409747 A0A1W2PPV4 95 aa10.12□□□□□ -0.79
CBX3-203ENST00000409747 FHL2Q14192 279 aa10.12□□□□□ -0.79
CBX3-203ENST00000409747 PCNPQ8WW12 178 aaKnown RBP10.12□□□□□ -0.79
CBX3-203ENST00000409747 C8orf49Q96NF6 230 aa10.12□□□□□ -0.79
CBX3-203ENST00000409747 TMEM183BQ1AE95 376 aa10.11□□□□□ -0.79
CBX3-203ENST00000409747 NEGR1Q7Z3B1 354 aa10.11□□□□□ -0.79
CBX3-203ENST00000409747 IQCF2Q8IXL9 164 aa10.11□□□□□ -0.79
CBX3-203ENST00000409747 TMEM183AQ8IXX5 376 aa10.11□□□□□ -0.79
CBX3-203ENST00000409747 OR10G4Q8NGN3 311 aa10.11□□□□□ -0.79
CBX3-203ENST00000409747 RASL10AQ92737 203 aa10.11□□□□□ -0.79
CBX3-203ENST00000409747 MDFICQ9P1T7 246 aa10.11□□□□□ -0.79
CBX3-203ENST00000409747 PGPA6NDG6 321 aa10.1□□□□□ -0.79
CBX3-203ENST00000409747 TDRG1Q3Y452 100 aa10.1□□□□□ -0.79
CBX3-203ENST00000409747 MAPKAPK5-AS1Q8N8E1 139 aa10.1□□□□□ -0.79
CBX3-203ENST00000409747 NAGKQ9UJ70 344 aa10.1□□□□□ -0.79
CBX3-203ENST00000409747 RPH3ALQ9UNE2 315 aa10.1□□□□□ -0.79
CBX3-203ENST00000409747 DNAH5Q8TE73 4624 aa10.1□□□□□ -0.79
CBX3-203ENST00000409747 TRAV9-2A0A087WT02 112 aa10.1□□□□□ -0.79
CBX3-203ENST00000409747 ORM1P02763 201 aa10.1□□□□□ -0.79
CBX3-203ENST00000409747 SRIP30626 198 aa10.1□□□□□ -0.79
CBX3-203ENST00000409747 LYPD5Q6UWN5 251 aa10.1□□□□□ -0.79
CBX3-203ENST00000409747 TRAV21A0A0B4J279 112 aa10.09□□□□□ -0.79
CBX3-203ENST00000409747 K7EP13 123 aa10.09□□□□□ -0.79
CBX3-203ENST00000409747 EREGO14944 169 aa10.09□□□□□ -0.79
CBX3-203ENST00000409747 GOLT1AQ6ZVE7 132 aa10.09□□□□□ -0.79
CBX3-203ENST00000409747 NFE4Q86UQ8 179 aa10.09□□□□□ -0.79
CBX3-203ENST00000409747 TRAV4A0A0B4J268 109 aa10.08□□□□□ -0.8
CBX3-203ENST00000409747 SERTM2A0A1B0GWG4 89 aa10.08□□□□□ -0.8
CBX3-203ENST00000409747 C9JCJ5 164 aa10.08□□□□□ -0.8
CBX3-203ENST00000409747 K7EQD1 137 aa10.08□□□□□ -0.8
CBX3-203ENST00000409747 SFTA3P0C7M3 94 aa10.08□□□□□ -0.8
CBX3-203ENST00000409747 RAB2AP61019 212 aa10.08□□□□□ -0.8
CBX3-203ENST00000409747 Q6ZRN7 208 aaPredicted RBP10.08□□□□□ -0.8
CBX3-203ENST00000409747 OR10G9Q8NGN4 311 aa10.08□□□□□ -0.8
CBX3-203ENST00000409747 OR10G7Q8NGN6 311 aa10.08□□□□□ -0.8
CBX3-203ENST00000409747 ZNF479Q96JC4 524 aa10.08□□□□□ -0.8
CBX3-203ENST00000409747 TXNDC17Q9BRA2 123 aa10.08□□□□□ -0.8
CBX3-203ENST00000409747 WFDC1Q9HC57 220 aa10.08□□□□□ -0.8
CBX3-203ENST00000409747 APOBP04114 4563 aaKnown RBP10.08□□□□□ -0.8
CBX3-203ENST00000409747 M0R2P5 195 aa10.07□□□□□ -0.8
CBX3-203ENST00000409747 KRTAP10-2P60368 255 aa10.07□□□□□ -0.8
CBX3-203ENST00000409747 ERVFC1-1P60608 527 aa10.07□□□□□ -0.8
CBX3-203ENST00000409747 KCNS1Q96KK3 526 aa10.07□□□□□ -0.8
CBX3-203ENST00000409747 NDFIP1Q9BT67 221 aa10.07□□□□□ -0.8
CBX3-203ENST00000409747 SDF2L1Q9HCN8 221 aa10.07□□□□□ -0.8
CBX3-203ENST00000409747 TREM1Q9NP99 234 aa10.07□□□□□ -0.8
CBX3-203ENST00000409747 LY96Q9Y6Y9 160 aa10.07□□□□□ -0.8
CBX3-203ENST00000409747 EIF3GO75821 320 aaKnown RBP eCLIP10.07□□□□□ -0.8
CBX3-203ENST00000409747 GYPEP15421 78 aa10.07□□□□□ -0.8
CBX3-203ENST00000409747 OR4C5Q8NGB2 326 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms