RNA–Protein interactions for RNA: ENST00000397938.6

EWSR1-206, Transcript of EWS RNA binding protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene EWSR1, Length 2,654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-206ENST00000397938 NCBP2LA6PVI3 153 aaKnown RBP13.36□□□□□ -0.27
EWSR1-206ENST00000397938 LINC01619G3V211 115 aa13.36□□□□□ -0.27
EWSR1-206ENST00000397938 TRAV26-2A0A0B4J265 109 aa13.36□□□□□ -0.27
EWSR1-206ENST00000397938 A0A1B0GWB2 263 aa13.36□□□□□ -0.27
EWSR1-206ENST00000397938 KLRD1Q13241 179 aa13.36□□□□□ -0.27
EWSR1-206ENST00000397938 GAGE13Q4V321 117 aa13.36□□□□□ -0.27
EWSR1-206ENST00000397938 RNF182Q8N6D2 247 aa13.36□□□□□ -0.27
EWSR1-206ENST00000397938 IGHV7-4-1A0A0J9YVY3 117 aa13.36□□□□□ -0.27
EWSR1-206ENST00000397938 EFNA4P52798 201 aa13.36□□□□□ -0.27
EWSR1-206ENST00000397938 CCDC144NLQ6NUI1 221 aa13.35□□□□□ -0.27
EWSR1-206ENST00000397938 ODF3BA8MYP8 253 aa13.35□□□□□ -0.27
EWSR1-206ENST00000397938 NDUFS8O00217 210 aa13.35□□□□□ -0.27
EWSR1-206ENST00000397938 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.35□□□□□ -0.27
EWSR1-206ENST00000397938 UFC1Q9Y3C8 167 aa13.35□□□□□ -0.27
EWSR1-206ENST00000397938 TRAV12-1A0A0B4J245 112 aa13.34□□□□□ -0.27
EWSR1-206ENST00000397938 IGHV3-35A0A0C4DH35 117 aa13.34□□□□□ -0.27
EWSR1-206ENST00000397938 F8VRH5 84 aa13.34□□□□□ -0.27
EWSR1-206ENST00000397938 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.34□□□□□ -0.27
EWSR1-206ENST00000397938 TPRP12270 2363 aaKnown RBP13.34□□□□□ -0.27
EWSR1-206ENST00000397938 A0A1B0GV72 72 aa13.34□□□□□ -0.27
EWSR1-206ENST00000397938 ATP6V0BQ99437 205 aa13.34□□□□□ -0.27
EWSR1-206ENST00000397938 H7C1H1 209 aa13.33□□□□□ -0.28
EWSR1-206ENST00000397938 CD3EP07766 207 aa13.33□□□□□ -0.28
EWSR1-206ENST00000397938 MTURNQ8N3F0 131 aa13.33□□□□□ -0.28
EWSR1-206ENST00000397938 SLC50A1Q9BRV3 221 aa13.33□□□□□ -0.28
EWSR1-206ENST00000397938 AGPAT4-IT1Q9H0P7 198 aa13.33□□□□□ -0.28
EWSR1-206ENST00000397938 MGAQ8IWI9 3026 aa13.33□□□□□ -0.28
EWSR1-206ENST00000397938 MYMXA0A1B0GTQ4 84 aa13.33□□□□□ -0.28
EWSR1-206ENST00000397938 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.33□□□□□ -0.28
EWSR1-206ENST00000397938 BUB3O43684 328 aa13.33□□□□□ -0.28
EWSR1-206ENST00000397938 ZFAND3Q9H8U3 227 aa13.33□□□□□ -0.28
EWSR1-206ENST00000397938 TACC2O95359 2948 aa13.33□□□□□ -0.28
EWSR1-206ENST00000397938 IGHV4-4A0A075B6R2 117 aa13.32□□□□□ -0.28
EWSR1-206ENST00000397938 RAB9AP51151 201 aa13.32□□□□□ -0.28
EWSR1-206ENST00000397938 BDP1A6H8Y1 2624 aa13.32□□□□□ -0.28
EWSR1-206ENST00000397938 LAMA5O15230 3695 aa13.32□□□□□ -0.28
EWSR1-206ENST00000397938 OR11H12B2RN74 326 aa13.32□□□□□ -0.28
EWSR1-206ENST00000397938 Q8N6K4 173 aa13.32□□□□□ -0.28
EWSR1-206ENST00000397938 OR11H1Q8NG94 326 aa13.32□□□□□ -0.28
EWSR1-206ENST00000397938 OR11H2Q8NH07 326 aa13.32□□□□□ -0.28
EWSR1-206ENST00000397938 SMIM2Q9BVW6 85 aa13.31□□□□□ -0.28
EWSR1-206ENST00000397938 ARHGAP32A7KAX9 2087 aa13.31□□□□□ -0.28
EWSR1-206ENST00000397938 INSL3P51460 131 aa13.31□□□□□ -0.28
EWSR1-206ENST00000397938 MORN3Q6PF18 240 aaPredicted RBP13.31□□□□□ -0.28
EWSR1-206ENST00000397938 MAP1BP46821 2468 aaKnown RBP13.3□□□□□ -0.28
EWSR1-206ENST00000397938 M0R1W7 72 aa13.3□□□□□ -0.28
EWSR1-206ENST00000397938 TMEM78Q5T7P6 136 aa13.3□□□□□ -0.28
EWSR1-206ENST00000397938 SPANXN1Q5VSR9 72 aa13.3□□□□□ -0.28
EWSR1-206ENST00000397938 MRAP2Q96G30 205 aa13.3□□□□□ -0.28
EWSR1-206ENST00000397938 IGHV7-81A0A0B4J1V7 117 aa13.29□□□□□ -0.28
EWSR1-206ENST00000397938 POLEQ07864 2286 aa13.29□□□□□ -0.28
EWSR1-206ENST00000397938 PRTN3P24158 256 aa13.29□□□□□ -0.28
EWSR1-206ENST00000397938 TRAV8-2A0A0B4J237 113 aa13.28□□□□□ -0.28
EWSR1-206ENST00000397938 IGHV3-66A0A0C4DH42 116 aa13.28□□□□□ -0.28
EWSR1-206ENST00000397938 LGALS1P09382 135 aaKnown RBP13.28□□□□□ -0.28
EWSR1-206ENST00000397938 CYSLTR1Q9Y271 337 aa13.28□□□□□ -0.28
EWSR1-206ENST00000397938 APC2O95996 2303 aa13.28□□□□□ -0.28
EWSR1-206ENST00000397938 BSNQ9UPA5 3926 aa13.28□□□□□ -0.28
EWSR1-206ENST00000397938 CLPSL1A2RUU4 121 aa13.28□□□□□ -0.28
EWSR1-206ENST00000397938 NEXN-AS1Q8NBZ9 246 aa13.28□□□□□ -0.28
EWSR1-206ENST00000397938 MSRB2Q9Y3D2 182 aa13.28□□□□□ -0.28
EWSR1-206ENST00000397938 CNOT1A5YKK6 2376 aaKnown RBP13.28□□□□□ -0.28
EWSR1-206ENST00000397938 HOXA3O43365 443 aaPredicted RBP13.27□□□□□ -0.28
EWSR1-206ENST00000397938 SLC25A16P16260 332 aa13.27□□□□□ -0.28
EWSR1-206ENST00000397938 ATP5G2Q06055 141 aa13.27□□□□□ -0.28
EWSR1-206ENST00000397938 C15orf32Q32M92 178 aa13.27□□□□□ -0.28
EWSR1-206ENST00000397938 ORMDL2Q53FV1 153 aa13.27□□□□□ -0.28
EWSR1-206ENST00000397938 TOMM6Q96B49 74 aa13.27□□□□□ -0.28
EWSR1-206ENST00000397938 MRPL53Q96EL3 112 aaKnown RBP13.27□□□□□ -0.28
EWSR1-206ENST00000397938 SCGB3A1Q96QR1 104 aa13.27□□□□□ -0.28
EWSR1-206ENST00000397938 SPOCK3Q9BQ16 436 aa13.27□□□□□ -0.28
EWSR1-206ENST00000397938 APOMO95445 188 aa13.27□□□□□ -0.29
EWSR1-206ENST00000397938 EBI3Q14213 229 aa13.27□□□□□ -0.29
EWSR1-206ENST00000397938 TCTEX1D4Q5JR98 221 aa13.27□□□□□ -0.29
EWSR1-206ENST00000397938 Q6ZQT7 251 aa13.27□□□□□ -0.29
EWSR1-206ENST00000397938 OTOGLQ3ZCN5 2332 aa13.27□□□□□ -0.29
EWSR1-206ENST00000397938 VMO1Q7Z5L0 202 aa13.26□□□□□ -0.29
EWSR1-206ENST00000397938 KLK15Q9H2R5 256 aa13.26□□□□□ -0.29
EWSR1-206ENST00000397938 HIF1ANQ9NWT6 349 aa13.26□□□□□ -0.29
EWSR1-206ENST00000397938 PGPEP1Q9NXJ5 209 aa13.26□□□□□ -0.29
EWSR1-206ENST00000397938 RAXQ9Y2V3 346 aa13.26□□□□□ -0.29
EWSR1-206ENST00000397938 H3BVH4 76 aa13.26□□□□□ -0.29
EWSR1-206ENST00000397938 C9orf47Q6ZRZ4 202 aa13.26□□□□□ -0.29
EWSR1-206ENST00000397938 ATP6V0E2Q8NHE4 81 aa13.26□□□□□ -0.29
EWSR1-206ENST00000397938 FAM110DQ8TAY7 271 aaPredicted RBP13.26□□□□□ -0.29
EWSR1-206ENST00000397938 CSMD1Q96PZ7 3565 aa13.26□□□□□ -0.29
EWSR1-206ENST00000397938 CLEC3BP05452 202 aa13.26□□□□□ -0.29
EWSR1-206ENST00000397938 LCNL1Q6ZST4 164 aa13.26□□□□□ -0.29
EWSR1-206ENST00000397938 Q8NA96 180 aa13.26□□□□□ -0.29
EWSR1-206ENST00000397938 C1QTNF4Q9BXJ3 329 aa13.26□□□□□ -0.29
EWSR1-206ENST00000397938 IGHV3OR16-13A0A075B7E8 117 aa13.25□□□□□ -0.29
EWSR1-206ENST00000397938 IGHV3-74A0A0B4J1X5 117 aa13.25□□□□□ -0.29
EWSR1-206ENST00000397938 CFAP126Q5VTH2 177 aa13.25□□□□□ -0.29
EWSR1-206ENST00000397938 C8orf86Q6ZUL3 223 aa13.25□□□□□ -0.29
EWSR1-206ENST00000397938 C20orf78Q9BR46 151 aa13.25□□□□□ -0.29
EWSR1-206ENST00000397938 EP300Q09472 2414 aaPredicted RBP13.25□□□□□ -0.29
EWSR1-206ENST00000397938 OOSP1A8MZH6 123 aa13.25□□□□□ -0.29
EWSR1-206ENST00000397938 LY6HO94772 140 aa13.25□□□□□ -0.29
EWSR1-206ENST00000397938 SUMO2P61956 95 aaKnown RBP13.25□□□□□ -0.29
EWSR1-206ENST00000397938 FOXI1Q12951 378 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 106.3 ms