RNA–Protein interactions for RNA: ENST00000396464.7

GABPB1-204, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,401 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-204ENST00000396464 TNFP01375 233 aa3.13□□□□□ -1.91
GABPB1-204ENST00000396464 CD14P08571 375 aa3.13□□□□□ -1.91
GABPB1-204ENST00000396464 FUT5Q11128 374 aa3.13□□□□□ -1.91
GABPB1-204ENST00000396464 KLRD1Q13241 179 aa3.13□□□□□ -1.91
GABPB1-204ENST00000396464 LGALSLQ3ZCW2 172 aaPredicted RBP3.13□□□□□ -1.91
GABPB1-204ENST00000396464 DYNAPQ8N1N2 210 aa3.13□□□□□ -1.91
GABPB1-204ENST00000396464 FAM216BQ8N7L0 139 aa3.13□□□□□ -1.91
GABPB1-204ENST00000396464 SLC35B3Q9H1N7 401 aa3.13□□□□□ -1.91
GABPB1-204ENST00000396464 SCN8AQ9UQD0 1980 aa3.13□□□□□ -1.91
GABPB1-204ENST00000396464 ANAPC1Q9H1A4 1944 aa3.13□□□□□ -1.91
GABPB1-204ENST00000396464 ZNF646O15015 1829 aaPredicted RBP3.13□□□□□ -1.91
GABPB1-204ENST00000396464 SCN9AQ15858 1988 aa3.12□□□□□ -1.91
GABPB1-204ENST00000396464 AGRNO00468 2067 aa3.12□□□□□ -1.91
GABPB1-204ENST00000396464 TRBV20-1A0A075B6N2 111 aa3.12□□□□□ -1.91
GABPB1-204ENST00000396464 H3BPC8 53 aa3.12□□□□□ -1.91
GABPB1-204ENST00000396464 PITX3O75364 302 aa3.12□□□□□ -1.91
GABPB1-204ENST00000396464 WISP3O95389 354 aaPredicted RBP3.12□□□□□ -1.91
GABPB1-204ENST00000396464 ZNF705BP0CI00 300 aaPredicted RBP3.12□□□□□ -1.91
GABPB1-204ENST00000396464 DNAH10OSP0CZ25 163 aa3.12□□□□□ -1.91
GABPB1-204ENST00000396464 DEFA4P12838 97 aa3.12□□□□□ -1.91
GABPB1-204ENST00000396464 TPT1P13693 172 aaKnown RBP3.12□□□□□ -1.91
GABPB1-204ENST00000396464 BRS3P32247 399 aa3.12□□□□□ -1.91
GABPB1-204ENST00000396464 KRTAP10-3P60369 221 aa3.12□□□□□ -1.91
GABPB1-204ENST00000396464 MRPS36P82909 103 aaKnown RBP3.12□□□□□ -1.91
GABPB1-204ENST00000396464 ZNF816Q0VGE8 651 aaPredicted RBP3.12□□□□□ -1.91
GABPB1-204ENST00000396464 ATOH7Q8N100 152 aa3.12□□□□□ -1.91
GABPB1-204ENST00000396464 C5orf17Q8NAS9 161 aa3.12□□□□□ -1.91
GABPB1-204ENST00000396464 ST20-AS1Q8NBB2 130 aa3.12□□□□□ -1.91
GABPB1-204ENST00000396464 MAPK1IP1LQ8NDC0 245 aa3.12□□□□□ -1.91
GABPB1-204ENST00000396464 CHCHD1Q96BP2 118 aaKnown RBP3.12□□□□□ -1.91
GABPB1-204ENST00000396464 MRPS24Q96EL2 167 aaKnown RBP3.12□□□□□ -1.91
GABPB1-204ENST00000396464 SEC11CQ9BY50 192 aa3.12□□□□□ -1.91
GABPB1-204ENST00000396464 AGPAT4-IT1Q9H0P7 198 aa3.12□□□□□ -1.91
GABPB1-204ENST00000396464 RPRMQ9NS64 109 aa3.12□□□□□ -1.91
GABPB1-204ENST00000396464 TAS2R8Q9NYW2 309 aa3.12□□□□□ -1.91
GABPB1-204ENST00000396464 MYO5AQ9Y4I1 1855 aaKnown RBP3.12□□□□□ -1.91
GABPB1-204ENST00000396464 PSME4Q14997 1843 aa3.12□□□□□ -1.91
GABPB1-204ENST00000396464 C16orf90A8MZG2 172 aa3.11□□□□□ -1.91
GABPB1-204ENST00000396464 SDCBPO00560 298 aaPredicted RBP3.11□□□□□ -1.91
GABPB1-204ENST00000396464 CD3DP04234 171 aa3.11□□□□□ -1.91
GABPB1-204ENST00000396464 CRYGAP11844 174 aa3.11□□□□□ -1.91
GABPB1-204ENST00000396464 SLC25A4P12235 298 aa3.11□□□□□ -1.91
GABPB1-204ENST00000396464 ZNF22P17026 224 aaPredicted RBP3.11□□□□□ -1.91
GABPB1-204ENST00000396464 NFYAP23511 347 aaPredicted RBP3.11□□□□□ -1.91
GABPB1-204ENST00000396464 BLCAPP62952 87 aa3.11□□□□□ -1.91
GABPB1-204ENST00000396464 Q6P435 159 aa3.11□□□□□ -1.91
GABPB1-204ENST00000396464 C9orf62Q8N4C0 152 aa3.11□□□□□ -1.91
GABPB1-204ENST00000396464 LINC00471Q8N535 108 aa3.11□□□□□ -1.91
GABPB1-204ENST00000396464 PLPP5Q8NEB5 264 aa3.11□□□□□ -1.91
GABPB1-204ENST00000396464 UBALD1Q8TB05 177 aa3.11□□□□□ -1.91
GABPB1-204ENST00000396464 BCL2L10Q9HD36 194 aa3.11□□□□□ -1.91
GABPB1-204ENST00000396464 TP53BP1Q12888 1972 aaPredicted RBP3.11□□□□□ -1.91
GABPB1-204ENST00000396464 LAMA4Q16363 1823 aa3.11□□□□□ -1.91
GABPB1-204ENST00000396464 MYH6P13533 1939 aa3.11□□□□□ -1.91
GABPB1-204ENST00000396464 POLEQ07864 2286 aa3.11□□□□□ -1.91
GABPB1-204ENST00000396464 DOCK9Q9BZ29 2069 aa3.11□□□□□ -1.91
GABPB1-204ENST00000396464 MYH1P12882 1939 aa3.11□□□□□ -1.91
GABPB1-204ENST00000396464 TRAV7A0A075B6U4 112 aa3.1□□□□□ -1.91
GABPB1-204ENST00000396464 TIMM17BO60830 172 aa3.1□□□□□ -1.91
GABPB1-204ENST00000396464 ZNF737O75373 536 aa3.1□□□□□ -1.91
GABPB1-204ENST00000396464 SPINK8P0C7L1 97 aa3.1□□□□□ -1.91
GABPB1-204ENST00000396464 LSM3P62310 102 aaKnown RBP3.1□□□□□ -1.91
GABPB1-204ENST00000396464 LYZL1Q6UWQ5 148 aa3.1□□□□□ -1.91
GABPB1-204ENST00000396464 Q8N2B8 174 aa3.1□□□□□ -1.91
GABPB1-204ENST00000396464 LINC00612Q8N6U2 182 aa3.1□□□□□ -1.91
GABPB1-204ENST00000396464 KLF14Q8TD94 323 aaPredicted RBP3.1□□□□□ -1.91
GABPB1-204ENST00000396464 TIMM9Q9Y5J7 89 aa3.1□□□□□ -1.91
GABPB1-204ENST00000396464 FAM215AQ9Y5M1 114 aa3.1□□□□□ -1.91
GABPB1-204ENST00000396464 HSPE1-MOB4S4R3N1 261 aa3.1□□□□□ -1.91
GABPB1-204ENST00000396464 COL1A1P02452 1464 aaPredicted RBP3.1□□□□□ -1.91
GABPB1-204ENST00000396464 AKAP11Q9UKA4 1901 aa3.1□□□□□ -1.91
GABPB1-204ENST00000396464 ZNF318Q5VUA4 2279 aa3.1□□□□□ -1.91
GABPB1-204ENST00000396464 CITO14578 2027 aa3.1□□□□□ -1.91
GABPB1-204ENST00000396464 TANC2Q9HCD6 1990 aa3.1□□□□□ -1.91
GABPB1-204ENST00000396464 IGLV4-69A0A075B6H9 119 aa3.1□□□□□ -1.91
GABPB1-204ENST00000396464 A0A0D9SFI3 127 aa3.1□□□□□ -1.91
GABPB1-204ENST00000396464 TMEM235A6NFC5 223 aa3.1□□□□□ -1.91
GABPB1-204ENST00000396464 CISD3P0C7P0 127 aa3.1□□□□□ -1.91
GABPB1-204ENST00000396464 CCL4P13236 92 aa3.1□□□□□ -1.91
GABPB1-204ENST00000396464 FABP4P15090 132 aa3.1□□□□□ -1.91
GABPB1-204ENST00000396464 FUSP35637 526 aaKnown RBP eCLIP3.1□□□□□ -1.91
GABPB1-204ENST00000396464 PCBD1P61457 104 aa3.1□□□□□ -1.91
GABPB1-204ENST00000396464 LCE3CQ5T5A8 94 aa3.1□□□□□ -1.91
GABPB1-204ENST00000396464 LINC01545Q5VT33 79 aa3.1□□□□□ -1.91
GABPB1-204ENST00000396464 MRPL54Q6P161 138 aaKnown RBP3.1□□□□□ -1.91
GABPB1-204ENST00000396464 Q6ZUT4 128 aa3.1□□□□□ -1.91
GABPB1-204ENST00000396464 C10orf111Q8N326 155 aa3.1□□□□□ -1.91
GABPB1-204ENST00000396464 CCL4L1Q8NHW4 92 aa3.1□□□□□ -1.91
GABPB1-204ENST00000396464 SPANXDQ9BXN6 97 aa3.1□□□□□ -1.91
GABPB1-204ENST00000396464 NAA60Q9H7X0 242 aa3.1□□□□□ -1.91
GABPB1-204ENST00000396464 SAR1AQ9NR31 198 aa3.1□□□□□ -1.91
GABPB1-204ENST00000396464 RPL26L1Q9UNX3 145 aaKnown RBP3.1□□□□□ -1.91
GABPB1-204ENST00000396464 CHCHD2Q9Y6H1 151 aaPredicted RBP3.1□□□□□ -1.91
GABPB1-204ENST00000396464 SCN4AP35499 1836 aa3.09□□□□□ -1.91
GABPB1-204ENST00000396464 PCM1Q15154 2024 aa3.09□□□□□ -1.92
GABPB1-204ENST00000396464 HEATR5AQ86XA9 2040 aa3.09□□□□□ -1.92
GABPB1-204ENST00000396464 UQCRHLA0A096LP55 91 aa3.09□□□□□ -1.92
GABPB1-204ENST00000396464 TRGV5A0A0B4J1U4 118 aa3.09□□□□□ -1.92
GABPB1-204ENST00000396464 C11orf86A6NJI1 115 aa3.09□□□□□ -1.92
GABPB1-204ENST00000396464 GEMIN2O14893 280 aaKnown RBP3.09□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 239.5 ms