RNA–Protein interactions for RNA: ENST00000395454.6

SCAF11-204, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF11, Length 1,931 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-204ENST00000395454 DPF1Q92782 380 aa11.42□□□□□ -0.58
SCAF11-204ENST00000395454 RAX2Q96IS3 184 aa11.42□□□□□ -0.58
SCAF11-204ENST00000395454 C12orf57Q99622 126 aa11.42□□□□□ -0.58
SCAF11-204ENST00000395454 A8MWP6 167 aa11.41□□□□□ -0.58
SCAF11-204ENST00000395454 CCL24O00175 119 aa11.41□□□□□ -0.58
SCAF11-204ENST00000395454 S100A2P29034 98 aa11.41□□□□□ -0.58
SCAF11-204ENST00000395454 KRTAP21-3Q3LHN1 58 aa11.41□□□□□ -0.58
SCAF11-204ENST00000395454 REC114Q7Z4M0 266 aa11.41□□□□□ -0.58
SCAF11-204ENST00000395454 SMPXQ9UHP9 88 aa11.41□□□□□ -0.58
SCAF11-204ENST00000395454 LINC01619G3V211 115 aa11.41□□□□□ -0.58
SCAF11-204ENST00000395454 HBBP68871 147 aa11.41□□□□□ -0.58
SCAF11-204ENST00000395454 GATD1Q8NB37 220 aa11.41□□□□□ -0.58
SCAF11-204ENST00000395454 TP53TG3Q9ULZ0 132 aa11.41□□□□□ -0.58
SCAF11-204ENST00000395454 UFC1Q9Y3C8 167 aa11.41□□□□□ -0.58
SCAF11-204ENST00000395454 LGALS9O00182 355 aa11.4□□□□□ -0.58
SCAF11-204ENST00000395454 SH2D1AO60880 128 aa11.4□□□□□ -0.58
SCAF11-204ENST00000395454 AMBPP02760 352 aa11.4□□□□□ -0.58
SCAF11-204ENST00000395454 CRISP2P16562 243 aa11.4□□□□□ -0.58
SCAF11-204ENST00000395454 HOXD3P31249 432 aaPredicted RBP11.4□□□□□ -0.58
SCAF11-204ENST00000395454 Q8TAT8 98 aa11.4□□□□□ -0.58
SCAF11-204ENST00000395454 ASCL2Q99929 193 aa11.4□□□□□ -0.58
SCAF11-204ENST00000395454 NDFIP1Q9BT67 221 aa11.4□□□□□ -0.58
SCAF11-204ENST00000395454 RHPN1-AS1Q9BWJ2 59 aa11.4□□□□□ -0.58
SCAF11-204ENST00000395454 NRN1Q9NPD7 142 aa11.4□□□□□ -0.58
SCAF11-204ENST00000395454 PF4P02776 101 aa11.39□□□□□ -0.59
SCAF11-204ENST00000395454 SLURP1P55000 103 aa11.39□□□□□ -0.59
SCAF11-204ENST00000395454 SLAQ13239 276 aa11.39□□□□□ -0.59
SCAF11-204ENST00000395454 TM4SF20Q53R12 229 aa11.39□□□□□ -0.59
SCAF11-204ENST00000395454 OR10J3Q5JRS4 329 aa11.39□□□□□ -0.59
SCAF11-204ENST00000395454 SAMD13Q5VXD3 122 aa11.39□□□□□ -0.59
SCAF11-204ENST00000395454 LENEPQ9Y5L5 61 aa11.39□□□□□ -0.59
SCAF11-204ENST00000395454 DNHD1Q96M86 4753 aa11.39□□□□□ -0.59
SCAF11-204ENST00000395454 TMEM213A2RRL7 107 aa11.39□□□□□ -0.59
SCAF11-204ENST00000395454 APCSP02743 223 aa11.39□□□□□ -0.59
SCAF11-204ENST00000395454 BMI1P35226 326 aa11.39□□□□□ -0.59
SCAF11-204ENST00000395454 LINC00310P59036 64 aa11.39□□□□□ -0.59
SCAF11-204ENST00000395454 FHL3Q13643 280 aa11.39□□□□□ -0.59
SCAF11-204ENST00000395454 C16orf92Q96LL3 132 aa11.39□□□□□ -0.59
SCAF11-204ENST00000395454 AGPAT4-IT1Q9H0P7 198 aa11.39□□□□□ -0.59
SCAF11-204ENST00000395454 M0QZ24 198 aa11.38□□□□□ -0.59
SCAF11-204ENST00000395454 PRB4P10163 310 aaPredicted RBP11.38□□□□□ -0.59
SCAF11-204ENST00000395454 FABP4P15090 132 aa11.38□□□□□ -0.59
SCAF11-204ENST00000395454 ZNF80P51504 273 aaPredicted RBP11.38□□□□□ -0.59
SCAF11-204ENST00000395454 ZNF138P52744 262 aa11.38□□□□□ -0.59
SCAF11-204ENST00000395454 PDZD11Q5EBL8 140 aa11.38□□□□□ -0.59
SCAF11-204ENST00000395454 PGLYRP4Q96LB8 373 aa11.38□□□□□ -0.59
SCAF11-204ENST00000395454 C20orf173Q96LM9 149 aa11.38□□□□□ -0.59
SCAF11-204ENST00000395454 A0A1B0GW15 77 aa11.37□□□□□ -0.59
SCAF11-204ENST00000395454 GZMBP10144 247 aa11.37□□□□□ -0.59
SCAF11-204ENST00000395454 SYNJ2BPP57105 145 aa11.37□□□□□ -0.59
SCAF11-204ENST00000395454 RPS20P60866 119 aaKnown RBP11.37□□□□□ -0.59
SCAF11-204ENST00000395454 RAB4BP61018 213 aa11.37□□□□□ -0.59
SCAF11-204ENST00000395454 ERCC8Q13216 396 aa11.37□□□□□ -0.59
SCAF11-204ENST00000395454 DNLZQ5SXM8 178 aa11.37□□□□□ -0.59
SCAF11-204ENST00000395454 ZNF575Q86XF7 245 aa11.37□□□□□ -0.59
SCAF11-204ENST00000395454 OR10D4PQ8NGN7 298 aa11.37□□□□□ -0.59
SCAF11-204ENST00000395454 PACRGQ96M98 296 aaPredicted RBP11.37□□□□□ -0.59
SCAF11-204ENST00000395454 A0A1B0GUT8 65 aa11.37□□□□□ -0.59
SCAF11-204ENST00000395454 GRIFINA4D1Z8 144 aa11.37□□□□□ -0.59
SCAF11-204ENST00000395454 PYY3Q5JQD4 70 aa11.37□□□□□ -0.59
SCAF11-204ENST00000395454 TMEM256Q8N2U0 113 aa11.37□□□□□ -0.59
SCAF11-204ENST00000395454 TMEM189A5PLL7 270 aa11.36□□□□□ -0.59
SCAF11-204ENST00000395454 OVOL1O14753 267 aa11.36□□□□□ -0.59
SCAF11-204ENST00000395454 CTRLP40313 264 aa11.36□□□□□ -0.59
SCAF11-204ENST00000395454 LINC01559Q495D7 138 aa11.36□□□□□ -0.59
SCAF11-204ENST00000395454 TMEM78Q5T7P6 136 aa11.36□□□□□ -0.59
SCAF11-204ENST00000395454 DLX4Q92988 240 aaPredicted RBP11.36□□□□□ -0.59
SCAF11-204ENST00000395454 PKD1L1Q8TDX9 2849 aa11.36□□□□□ -0.59
SCAF11-204ENST00000395454 TRBV7-9A0A0J9YWB2 115 aa11.35□□□□□ -0.59
SCAF11-204ENST00000395454 FABP5P3A8MUU1 101 aa11.35□□□□□ -0.59
SCAF11-204ENST00000395454 KLF5Q13887 457 aaPredicted RBP11.35□□□□□ -0.59
SCAF11-204ENST00000395454 DCANP1Q8TF63 244 aa11.35□□□□□ -0.59
SCAF11-204ENST00000395454 TMEM18Q96B42 140 aa11.35□□□□□ -0.59
SCAF11-204ENST00000395454 IGLC6P0CF74 106 aa11.35□□□□□ -0.59
SCAF11-204ENST00000395454 SRIP30626 198 aa11.35□□□□□ -0.59
SCAF11-204ENST00000395454 CAMPP49913 170 aa11.35□□□□□ -0.59
SCAF11-204ENST00000395454 HIST1H1AQ02539 215 aaPredicted RBP11.35□□□□□ -0.59
SCAF11-204ENST00000395454 SPATA3Q8NHX4 192 aa11.35□□□□□ -0.59
SCAF11-204ENST00000395454 FAM19A4Q96LR4 140 aa11.35□□□□□ -0.59
SCAF11-204ENST00000395454 CNFNQ9BYD5 112 aa11.35□□□□□ -0.59
SCAF11-204ENST00000395454 NUPR1O60356 82 aa11.34□□□□□ -0.59
SCAF11-204ENST00000395454 SERF1AO75920 110 aa11.34□□□□□ -0.59
SCAF11-204ENST00000395454 ZNF738Q8NE65 137 aa11.34□□□□□ -0.59
SCAF11-204ENST00000395454 LINC00477Q96M19 166 aa11.34□□□□□ -0.59
SCAF11-204ENST00000395454 ALKBH7Q9BT30 221 aaPredicted RBP11.34□□□□□ -0.59
SCAF11-204ENST00000395454 CMYA5Q8N3K9 4069 aa11.33□□□□□ -0.6
SCAF11-204ENST00000395454 ARMS2P0C7Q2 107 aa11.33□□□□□ -0.6
SCAF11-204ENST00000395454 RIGQ13278 110 aa11.33□□□□□ -0.6
SCAF11-204ENST00000395454 KIAA1644Q3SXP7 199 aa11.33□□□□□ -0.6
SCAF11-204ENST00000395454 ZNF493Q6ZR52 646 aa11.33□□□□□ -0.6
SCAF11-204ENST00000395454 APRG1Q8IVJ8 170 aa11.33□□□□□ -0.6
SCAF11-204ENST00000395454 NOTCH3Q9UM47 2321 aa11.33□□□□□ -0.6
SCAF11-204ENST00000395454 EDN2P20800 178 aa11.33□□□□□ -0.6
SCAF11-204ENST00000395454 LINC00482Q8N8I6 264 aa11.33□□□□□ -0.6
SCAF11-204ENST00000395454 C18orf32Q8TCD1 76 aa11.33□□□□□ -0.6
SCAF11-204ENST00000395454 F2Z2F3 143 aa11.32□□□□□ -0.6
SCAF11-204ENST00000395454 PAFAH1B2P68402 229 aa11.32□□□□□ -0.6
SCAF11-204ENST00000395454 OR9G4Q8NGQ1 327 aa11.32□□□□□ -0.6
SCAF11-204ENST00000395454 SSBP4Q9BWG4 385 aaPredicted RBP11.32□□□□□ -0.6
SCAF11-204ENST00000395454 LOC102724200A0A096LPH7 203 aaPredicted RBP11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 146.4 ms